RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 PPP6R2O75170 966 aa11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CDK11BP21127 795 aaKnown RBP11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PTPN12Q05209 780 aaKnown RBP11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SF3A1Q15459 793 aaKnown RBP11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZC3H15Q8WU90 426 aaKnown RBP11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 KLRG1Q96E93 195 aa11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CNNM1Q9NRU3 951 aa11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PGAP2Q9UHJ9 254 aa11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SHTN1A0MZ66 631 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TMEM88BA6NKF7 163 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 IGSF3O75054 1194 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 NDUFA8P51970 172 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 HIRAP54198 1017 aaPredicted RBP11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 MYL5Q02045 173 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 APOBRQ0VD83 1088 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 DPCR1Q3MIW9 517 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 MYSM1Q5VVJ2 828 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 RSBN1LQ6PCB5 846 aaPredicted RBP11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TRIM65Q6PJ69 517 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TXNRD3Q86VQ6 643 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 HOMER1Q86YM7 354 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 VSTM4Q8IW00 320 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 AGBL3Q8NEM8 1001 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 HELBQ8NG08 1087 aaPredicted RBP11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 RABGGTAQ92696 567 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 C8orf76Q96K31 380 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CWC15Q9P013 229 aaKnown RBP11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 HPSEQ9Y251 543 aa11.47□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZNF202O95125 648 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZFYP08048 801 aaPredicted RBP11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 KLRK1P26718 216 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CEBPZQ03701 1054 aaKnown RBP11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TFCP2Q12800 502 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 BRD3Q15059 726 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CT47A1Q5JQC4 288 aaPredicted RBP11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ANO1Q5XXA6 986 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SYNE3Q6ZMZ3 975 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 C15orf52Q6ZUT6 534 aaKnown RBP11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SAMD7Q7Z3H4 446 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 REXO1L1PQ8IX06 675 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 IQUBQ8NA54 791 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 FBXO18Q8NFZ0 1043 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TRPM4Q8TD43 1214 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SIL1Q9H173 461 aa11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHCHD4P3-201ENST00000455954 A0A1B0GVL5 298 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 RNF113AO15541 343 aaKnown RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 STX10O60499 249 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 DTNBO60941 627 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 TUBBP07437 444 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 HSPD1P10809 573 aaKnown RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 FDPSP14324 419 aaKnown RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 ZNF280AP59817 542 aaPredicted RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 MAP3K9P80192 1104 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 TBX2Q13207 712 aaPredicted RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 SLC39A14Q15043 492 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 AXDND1Q5T1B0 1012 aaPredicted RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 RSRC2Q7L4I2 434 aaKnown RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 EXOC4Q96A65 974 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 GMLQ99445 158 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 DBNDD2Q9BQY9 259 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 PUS3Q9BZE2 481 aaKnown RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 FTOQ9C0B1 505 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 PAG1Q9NWQ8 432 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 HOOK1Q9UJC3 728 aaKnown RBP11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 RIPOR2Q9Y4F9 1068 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 SCN9AQ15858 1988 aa11.45□□□□□ -0.58
CHCHD4P3-201ENST00000455954 MAST3O60307 1309 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 MROH5Q6ZUA9 1318 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 MYO3BQ8WXR4 1341 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 IRS2Q9Y4H2 1338 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 CCDC151A5D8V7 595 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 SNAP23O00161 211 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 CUTAO60888 179 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 CDKL5O76039 1030 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 CIAO1O76071 339 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 TOP1P11387 765 aaKnown RBP11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 PFKFB1P16118 471 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 IL15P40933 162 aaPredicted RBP11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 UBASH3AP57075 661 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 KIF23Q02241 960 aaPredicted RBP11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 UBE4AQ14139 1066 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 KIF4BQ2VIQ3 1234 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 DACT2Q5SW24 774 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 TTLL5Q6EMB2 1281 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 CC2D1AQ6P1N0 951 aaPredicted RBP11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 CCDC129Q6ZRS4 1044 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 ZNF804AQ7Z570 1209 aa11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 HNRNPLLQ8WVV9 542 aaKnown RBP11.44□□□□□ -0.58
CHCHD4P3-201ENST00000455954 BBXQ8WY36 941 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms