RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 PLCB3Q01970 1234 aa4.62□□□□□ -1.67
LINC02540-201ENST00000455554 DSC3Q14574 896 aa4.62□□□□□ -1.67
LINC02540-201ENST00000455554 WIPI1Q5MNZ9 446 aaPredicted RBP4.62□□□□□ -1.67
LINC02540-201ENST00000455554 CDH24Q86UP0 819 aa4.62□□□□□ -1.67
LINC02540-201ENST00000455554 PDZD8Q8NEN9 1154 aa4.62□□□□□ -1.67
LINC02540-201ENST00000455554 SLC6A17Q9H1V8 727 aa4.62□□□□□ -1.67
LINC02540-201ENST00000455554 C1orf115Q9H7X2 142 aa4.62□□□□□ -1.67
LINC02540-201ENST00000455554 PEX10O60683 326 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 SYN1P17600 705 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 TPP2P29144 1249 aaPredicted RBP4.61□□□□□ -1.67
LINC02540-201ENST00000455554 GRK4P32298 578 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 ZNF605Q86T29 641 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 LILRA2Q8N149 483 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 OXR1Q8N573 874 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 GAL3ST3Q96A11 431 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 KCNC2Q96PR1 638 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 SETDB2Q96T68 719 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 TRIT1Q9H3H1 467 aaKnown RBP4.61□□□□□ -1.67
LINC02540-201ENST00000455554 DCTN4Q9UJW0 460 aa4.61□□□□□ -1.67
LINC02540-201ENST00000455554 CNOT6Q9ULM6 557 aaKnown RBP4.61□□□□□ -1.67
LINC02540-201ENST00000455554 TREHO43280 583 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 ETV3P41162 512 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 GALK1P51570 392 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 NFIXQ14938 502 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 GAB4Q2WGN9 574 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 ZNF385BQ569K4 471 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 TCERG1LQ5VWI1 586 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 TMEM132EQ6IEE7 984 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 DBX2Q6ZNG2 339 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 FBF1Q8TES7 1133 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 SGPP1Q9BX95 441 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 OSBPL7Q9BZF2 842 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 DUSP15Q9H1R2 295 aaPredicted RBP4.6□□□□□ -1.67
LINC02540-201ENST00000455554 CWC22Q9HCG8 908 aaKnown RBP4.6□□□□□ -1.67
LINC02540-201ENST00000455554 GCM1Q9NP62 436 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 DUSP13Q9UII6 198 aa4.6□□□□□ -1.67
LINC02540-201ENST00000455554 TEX51A0A1B0GUA7 166 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 FITM1A5D6W6 292 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 RFXAPO00287 272 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 GIPC1O14908 333 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 TRIM13O60858 407 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 ZGLP1P0C6A0 271 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 EGR3Q06889 387 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 GGNQ86UU5 652 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 MRPL41Q8IXM3 137 aaKnown RBP4.59□□□□□ -1.67
LINC02540-201ENST00000455554 MARCH10Q8NA82 808 aaPredicted RBP4.59□□□□□ -1.67
LINC02540-201ENST00000455554 INTS4Q96HW7 963 aaKnown RBP4.59□□□□□ -1.67
LINC02540-201ENST00000455554 Q96M66 194 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 GPATCH2Q9NW75 528 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 RTEL1Q9NZ71 1219 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 EBF1Q9UH73 591 aa4.59□□□□□ -1.67
LINC02540-201ENST00000455554 YBX2Q9Y2T7 364 aaKnown RBP4.59□□□□□ -1.67
LINC02540-201ENST00000455554 SOWAHDA6NJG2 315 aa4.58□□□□□ -1.68
LINC02540-201ENST00000455554 EFEMP2O95967 443 aa4.58□□□□□ -1.68
LINC02540-201ENST00000455554 NFKB2Q00653 900 aa4.58□□□□□ -1.68
LINC02540-201ENST00000455554 NR0B2Q15466 257 aa4.58□□□□□ -1.68
LINC02540-201ENST00000455554 TMEM151BQ8IW70 566 aa4.58□□□□□ -1.68
LINC02540-201ENST00000455554 PANK1Q8TE04 598 aa4.58□□□□□ -1.68
LINC02540-201ENST00000455554 DHX38Q92620 1227 aaKnown RBP4.58□□□□□ -1.68
LINC02540-201ENST00000455554 DPH2Q9BQC3 489 aaPredicted RBP4.58□□□□□ -1.68
LINC02540-201ENST00000455554 ZNF552Q9H707 407 aaPredicted RBP4.58□□□□□ -1.68
LINC02540-201ENST00000455554 BIN2Q9UBW5 565 aaPredicted RBP4.58□□□□□ -1.68
LINC02540-201ENST00000455554 KCTD3Q9Y597 815 aa4.58□□□□□ -1.68
LINC02540-201ENST00000455554 TACC3Q9Y6A5 838 aa4.58□□□□□ -1.68
LINC02540-201ENST00000455554 LTKP29376 864 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 PDE6BP35913 854 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 SSPNQ14714 243 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 SKOR2Q2VWA4 1001 aaPredicted RBP4.57□□□□□ -1.68
LINC02540-201ENST00000455554 SLC6A19Q695T7 634 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 TTBK2Q6IQ55 1244 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 SV2BQ7L1I2 683 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 TSPYL5Q86VY4 417 aaPredicted RBP4.57□□□□□ -1.68
LINC02540-201ENST00000455554 DNAJB8Q8NHS0 232 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 SYTL4Q96C24 671 aaPredicted RBP4.57□□□□□ -1.68
LINC02540-201ENST00000455554 TMEM87BQ96K49 555 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 GPR62Q9BZJ7 368 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 TJP2Q9UDY2 1190 aa4.57□□□□□ -1.68
LINC02540-201ENST00000455554 GFRA2O00451 464 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 PGRP06401 933 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 USP17L7P0C7H9 530 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 MAPK1P28482 360 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 MAPK8P45983 427 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 SNX17Q15036 470 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 ALG1LQ6GMV1 187 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 SPPL2CQ8IUH8 684 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 CXorf38Q8TB03 319 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 FAM8A1Q9UBU6 413 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 GPR160Q9UJ42 338 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 CEP131Q9UPN4 1083 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 SPG7Q9UQ90 795 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 PCDHA11Q9Y5I1 949 aa4.56□□□□□ -1.68
LINC02540-201ENST00000455554 SASH1O94885 1247 aa4.55□□□□□ -1.68
LINC02540-201ENST00000455554 LMNB1P20700 586 aa4.55□□□□□ -1.68
LINC02540-201ENST00000455554 CHRNEQ04844 493 aa4.55□□□□□ -1.68
LINC02540-201ENST00000455554 DTWD2Q8NBA8 298 aa4.55□□□□□ -1.68
LINC02540-201ENST00000455554 XYLT2Q9H1B5 865 aa4.55□□□□□ -1.68
LINC02540-201ENST00000455554 C12orf49Q9H741 205 aa4.55□□□□□ -1.68
LINC02540-201ENST00000455554 KCNH3Q9ULD8 1083 aa4.55□□□□□ -1.68
LINC02540-201ENST00000455554 TTF2Q9UNY4 1162 aaKnown RBP4.55□□□□□ -1.68
LINC02540-201ENST00000455554 PI3P19957 117 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms