RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 BACE1P56817 501 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 NMIQ13287 307 aaPredicted RBP13.54□□□□□ -0.24
HDAC9-217ENST00000455069 SEPT2Q15019 361 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 RAB3GAP1Q15042 981 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 SKAP1Q86WV1 359 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 CLEC10AQ8IUN9 316 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 IFNL3Q8IZI9 196 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 ACER1Q8TDN7 264 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 DDRGK1Q96HY6 314 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 SDSP20132 328 aa13.53□□□□□ -0.24
HDAC9-217ENST00000455069 TDO2P48775 406 aa13.53□□□□□ -0.24
HDAC9-217ENST00000455069 SP3Q02447 781 aa13.53□□□□□ -0.24
HDAC9-217ENST00000455069 C17orf99Q6UX52 265 aa13.53□□□□□ -0.24
HDAC9-217ENST00000455069 CD99L2Q8TCZ2 262 aa13.53□□□□□ -0.24
HDAC9-217ENST00000455069 HELLSQ9NRZ9 838 aa13.53□□□□□ -0.24
HDAC9-217ENST00000455069 CPA4Q9UI42 421 aa13.53□□□□□ -0.24
HDAC9-217ENST00000455069 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
HDAC9-217ENST00000455069 SLC45A1Q9Y2W3 748 aa13.53□□□□□ -0.24
HDAC9-217ENST00000455069 CENPFP49454 3210 aa13.52□□□□□ -0.24
HDAC9-217ENST00000455069 A0A1W2PRG0 241 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 MINDY4BA8MYZ0 360 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 APPP05067 770 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 BCRP11274 1271 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 RASA1P20936 1047 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 CTGFP29279 349 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 MCMDC2Q4G0Z9 681 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 FBXO46Q6PJ61 603 aaPredicted RBP13.52□□□□□ -0.25
HDAC9-217ENST00000455069 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 SIAH1Q8IUQ4 282 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 AMOTL1Q8IY63 956 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 STK11IPQ8N1F8 1099 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 PARK7Q99497 189 aaKnown RBP13.52□□□□□ -0.25
HDAC9-217ENST00000455069 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.25
HDAC9-217ENST00000455069 ARHGAP39Q9C0H5 1083 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 IL25Q9H293 177 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 CABP5Q9NP86 173 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 EMILIN3Q9NT22 766 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 A0A0G2JMZ2 1700 aa13.52□□□□□ -0.25
HDAC9-217ENST00000455069 CCDC171Q6TFL3 1326 aa13.51□□□□□ -0.25
HDAC9-217ENST00000455069 C19orf81C9J6K1 198 aa13.51□□□□□ -0.25
HDAC9-217ENST00000455069 MPHOSPH10O00566 681 aaKnown RBP13.51□□□□□ -0.25
HDAC9-217ENST00000455069 DSG3P32926 999 aa13.51□□□□□ -0.25
HDAC9-217ENST00000455069 ZYXQ15942 572 aaKnown RBP13.51□□□□□ -0.25
HDAC9-217ENST00000455069 TMEM179Q6ZVK1 233 aa13.51□□□□□ -0.25
HDAC9-217ENST00000455069 OTOP1Q7RTM1 612 aa13.51□□□□□ -0.25
HDAC9-217ENST00000455069 ERO1AQ96HE7 468 aa13.51□□□□□ -0.25
HDAC9-217ENST00000455069 C12orf42Q96LP6 360 aa13.51□□□□□ -0.25
HDAC9-217ENST00000455069 KIAA1683Q9H0B3 1180 aa13.51□□□□□ -0.25
HDAC9-217ENST00000455069 TACC3Q9Y6A5 838 aa13.51□□□□□ -0.25
HDAC9-217ENST00000455069 PLXNB2O15031 1838 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 LACTBP83111 547 aaPredicted RBP13.5□□□□□ -0.25
HDAC9-217ENST00000455069 PPARAQ07869 468 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 KIAA1755Q5JYT7 1200 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 POTEEQ6S8J3 1075 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 CCDC17Q96LX7 622 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 FEZ1Q99689 392 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 NACAP1Q9BZK3 213 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 NAPBQ9H115 298 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 ASCC2Q9H1I8 757 aaPredicted RBP13.5□□□□□ -0.25
HDAC9-217ENST00000455069 TMOD4Q9NZQ9 345 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 TRIM17Q9Y577 477 aa13.5□□□□□ -0.25
HDAC9-217ENST00000455069 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
HDAC9-217ENST00000455069 PRDM1O75626 825 aa13.49□□□□□ -0.25
HDAC9-217ENST00000455069 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-217ENST00000455069 HSPD1P10809 573 aaKnown RBP13.49□□□□□ -0.25
HDAC9-217ENST00000455069 VCAM1P19320 739 aa13.49□□□□□ -0.25
HDAC9-217ENST00000455069 HOXA7P31268 230 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-217ENST00000455069 ICA1Q05084 483 aa13.49□□□□□ -0.25
HDAC9-217ENST00000455069 USP17L2Q6R6M4 530 aa13.49□□□□□ -0.25
HDAC9-217ENST00000455069 CWC27Q6UX04 472 aaKnown RBP13.49□□□□□ -0.25
HDAC9-217ENST00000455069 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-217ENST00000455069 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDAC9-217ENST00000455069 PLIN4Q96Q06 1357 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 ZMYM6O95789 1325 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 PEX10O60683 326 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 SLC34A2O95436 690 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 FGAP02671 866 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 CTDSPL2Q05D32 466 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 ALX1Q15699 326 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 SMCR8Q8TEV9 937 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-217ENST00000455069 INCENPQ9NQS7 918 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 DIAPH3Q9NSV4 1193 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 PNMA3Q9UL41 463 aa13.48□□□□□ -0.25
HDAC9-217ENST00000455069 IGKV6D-41A0A0C4DH26 115 aa13.47□□□□□ -0.25
HDAC9-217ENST00000455069 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
HDAC9-217ENST00000455069 USP14P54578 494 aa13.47□□□□□ -0.25
HDAC9-217ENST00000455069 ANKRD13CQ8N6S4 541 aa13.47□□□□□ -0.25
HDAC9-217ENST00000455069 TRIM47Q96LD4 638 aa13.47□□□□□ -0.25
HDAC9-217ENST00000455069 P2RX7Q99572 595 aaKnown RBP13.47□□□□□ -0.25
HDAC9-217ENST00000455069 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
HDAC9-217ENST00000455069 EFCC1Q9HA90 598 aa13.47□□□□□ -0.25
HDAC9-217ENST00000455069 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
HDAC9-217ENST00000455069 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
HDAC9-217ENST00000455069 BRCA2P51587 3418 aa13.47□□□□□ -0.25
HDAC9-217ENST00000455069 OSBPP22059 807 aa13.46□□□□□ -0.25
HDAC9-217ENST00000455069 HERVK_113P62684 666 aa13.46□□□□□ -0.25
HDAC9-217ENST00000455069 IRX3P78415 501 aaPredicted RBP13.46□□□□□ -0.25
HDAC9-217ENST00000455069 PABPC4Q13310 644 aaKnown RBP eCLIP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms