RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 GJC2Q5T442 439 aaPredicted RBP12.16□□□□□ -0.46
CLCN4-204ENST00000454850 ADGRA1Q86SQ6 560 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 MYLIPQ8WY64 445 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 CDCA7LQ96GN5 454 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 RABGAP1Q9Y3P9 1069 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 IVNS1ABPQ9Y6Y0 642 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 MUC3AQ02505 3323 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 NAV1Q8NEY1 1877 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 NCOR1O75376 2440 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 PLXNA1Q9UIW2 1896 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 SLC15A5A6NIM6 579 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L15C9J2P7 530 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L13C9JLJ4 530 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L11C9JVI0 530 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L18D6R9N7 530 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L22D6RA61 530 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L17D6RBQ6 530 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L19D6RCP7 530 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L20D6RJB6 530 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 DNM1LO00429 736 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 UQCRFS1P1P0C7P4 283 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L24Q0WX57 530 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 SHHQ15465 462 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 C9orf50Q5SZB4 431 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 ANO1Q5XXA6 986 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 FOXP4Q8IVH2 680 aaPredicted RBP12.15□□□□□ -0.46
CLCN4-204ENST00000454850 TRPV1Q8NER1 839 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 NPLOC4Q8TAT6 608 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 LPAR1Q92633 364 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 ZNF236Q9UL36 1845 aa12.15□□□□□ -0.46
CLCN4-204ENST00000454850 COL11A1P12107 1806 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-204ENST00000454850 MSCO60682 206 aa12.14□□□□□ -0.47
CLCN4-204ENST00000454850 GNAI3P08754 354 aa12.14□□□□□ -0.47
CLCN4-204ENST00000454850 PTPREP23469 700 aa12.14□□□□□ -0.47
CLCN4-204ENST00000454850 DYNLL1P63167 89 aaKnown RBP12.14□□□□□ -0.47
CLCN4-204ENST00000454850 G3BP1Q13283 466 aaKnown RBP eCLIP12.14□□□□□ -0.47
CLCN4-204ENST00000454850 RAB3GAP1Q15042 981 aa12.14□□□□□ -0.47
CLCN4-204ENST00000454850 TTC39AQ5SRH9 613 aa12.14□□□□□ -0.47
CLCN4-204ENST00000454850 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
CLCN4-204ENST00000454850 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
CLCN4-204ENST00000454850 SEMA6BQ9H3T3 888 aa12.14□□□□□ -0.47
CLCN4-204ENST00000454850 BTBD7Q9P203 1132 aa12.14□□□□□ -0.47
CLCN4-204ENST00000454850 KBTBD13C9JR72 458 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 FOSL2P15408 326 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 VCAM1P19320 739 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 PPP4CP60510 307 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 MTX1Q13505 466 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 GRB14Q14449 540 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 TRIM60Q495X7 471 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 BADQ92934 168 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 C12orf42Q96LP6 360 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 TTYH1Q9H313 450 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-204ENST00000454850 PRDM6Q9NQX0 595 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 PARP14Q460N5 1801 aa12.13□□□□□ -0.47
CLCN4-204ENST00000454850 A0A0G2JMZ2 1700 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 PNMA6EA0A0J9YXQ4 647 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-204ENST00000454850 CYP2E1P05181 493 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-204ENST00000454850 CYBAP13498 195 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 CATSPERGQ6ZRH7 1159 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 DPP9Q86TI2 863 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 MIGA1Q8NAN2 632 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 FERMT2Q96AC1 680 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 DBNDD2Q9BQY9 259 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 RPAP3Q9H6T3 665 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-204ENST00000454850 PDLIM7Q9NR12 457 aa12.12□□□□□ -0.47
CLCN4-204ENST00000454850 BDP1A6H8Y1 2624 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 HOXC6P09630 235 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 CYP7A1P22680 504 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 ADORA2AP29274 412 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 ZAP70P43403 619 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 USP5P45974 858 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 USP14P54578 494 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 OS9Q13438 667 aaPredicted RBP12.11□□□□□ -0.47
CLCN4-204ENST00000454850 CCDC158Q5M9N0 1113 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 SH3RF1Q7Z6J0 888 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 ARRDC4Q8NCT1 418 aa12.11□□□□□ -0.47
CLCN4-204ENST00000454850 PIH1D3Q9NQM4 214 aaKnown RBP12.11□□□□□ -0.47
CLCN4-204ENST00000454850 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
CLCN4-204ENST00000454850 GNAI2P04899 355 aa12.1□□□□□ -0.47
CLCN4-204ENST00000454850 ADCYAP1R1P41586 468 aa12.1□□□□□ -0.47
CLCN4-204ENST00000454850 SMAD3P84022 425 aaKnown RBP12.1□□□□□ -0.47
CLCN4-204ENST00000454850 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
CLCN4-204ENST00000454850 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
CLCN4-204ENST00000454850 TNNI3KQ59H18 835 aa12.1□□□□□ -0.47
CLCN4-204ENST00000454850 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
CLCN4-204ENST00000454850 KIAA1683Q9H0B3 1180 aa12.1□□□□□ -0.47
CLCN4-204ENST00000454850 SERPINB13Q9UIV8 391 aa12.1□□□□□ -0.47
CLCN4-204ENST00000454850 FPGT-TNNI3KV9GXZ4 949 aa12.1□□□□□ -0.47
CLCN4-204ENST00000454850 BAZ2AQ9UIF9 1905 aaKnown RBP12.09□□□□□ -0.47
CLCN4-204ENST00000454850 CHD9Q3L8U1 2897 aa12.09□□□□□ -0.47
CLCN4-204ENST00000454850 IDH1O75874 414 aaKnown RBP12.09□□□□□ -0.47
CLCN4-204ENST00000454850 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
CLCN4-204ENST00000454850 PRAMEF19Q5SWL8 479 aa12.09□□□□□ -0.47
CLCN4-204ENST00000454850 OLFML2BQ68BL8 750 aa12.09□□□□□ -0.47
CLCN4-204ENST00000454850 TATDN1Q6P1N9 297 aa12.09□□□□□ -0.47
CLCN4-204ENST00000454850 LBX2Q6XYB7 198 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms