RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 TTC39AQ5SRH9 613 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 C9orf50Q5SZB4 431 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 GJC2Q5T442 439 aaPredicted RBP8.62□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L2Q6R6M4 530 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 FEZ1Q99689 392 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 NOL10Q9BSC4 688 aaKnown RBP8.62□□□□□ -1.03
CHEK2-220ENST00000454252 TRIM34Q9BYJ4 488 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 DHX36Q9H2U1 1008 aaKnown RBP8.62□□□□□ -1.03
CHEK2-220ENST00000454252 CWC22Q9HCG8 908 aaKnown RBP8.62□□□□□ -1.03
CHEK2-220ENST00000454252 FPGT-TNNI3KV9GXZ4 949 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 MYH13Q9UKX3 1938 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 SPDYE16A6NNV3 312 aaPredicted RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 C19orf81C9J6K1 198 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 BAG3O95817 575 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 MAP4K4O95819 1239 aaPredicted RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 MYCNP04198 464 aaPredicted RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 GNAI2P04899 355 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 UQCRFS1P1P0C7P4 283 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 CAPN2P17655 700 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 CYP7A1P22680 504 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 GUCY1A2P33402 732 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 RTP1P59025 263 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 PPP4CP60510 307 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 SHHQ15465 462 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 PRAMEF19Q5SWL8 479 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 CLEC10AQ8IUN9 316 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 FOXP4Q8IVH2 680 aaPredicted RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 FRAT1Q92837 279 aaPredicted RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 EDC3Q96F86 508 aaKnown RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 CCDC8Q9H0W5 538 aaPredicted RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 RPAP3Q9H6T3 665 aaPredicted RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 ANTXR1Q9H6X2 564 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 PRDM5Q9NQX1 630 aaPredicted RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 DDX20Q9UHI6 824 aaKnown RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 DBNLQ9UJU6 430 aaKnown RBP8.61□□□□□ -1.03
CHEK2-220ENST00000454252 ATP11BQ9Y2G3 1177 aa8.61□□□□□ -1.03
CHEK2-220ENST00000454252 DOCK3Q8IZD9 2030 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 A0A1W2PRG0 241 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 IDH1O75874 414 aaKnown RBP8.6□□□□□ -1.03
CHEK2-220ENST00000454252 HLA-DOAP06340 250 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 CYBAP13498 195 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 PTPREP23469 700 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 ITGB8P26012 769 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 SHMT1P34896 483 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 PLCD1P51178 756 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 KIAA1755Q5JYT7 1200 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 MFSD14CQ5VZR4 134 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 CATSPERGQ6ZRH7 1159 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 SH3RF1Q7Z6J0 888 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 TMEM57Q8N5G2 664 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 MAGEB6Q8N7X4 407 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 C12orf42Q96LP6 360 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 CDX2Q99626 313 aaPredicted RBP8.6□□□□□ -1.03
CHEK2-220ENST00000454252 LBHD1Q9BQE6 289 aaPredicted RBP8.6□□□□□ -1.03
CHEK2-220ENST00000454252 RABGAP1Q9Y3P9 1069 aa8.6□□□□□ -1.03
CHEK2-220ENST00000454252 TRIM43BA6NCK2 446 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 SLC15A5A6NIM6 579 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L15C9J2P7 530 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L13C9JLJ4 530 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L11C9JVI0 530 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L18D6R9N7 530 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L22D6RA61 530 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L17D6RBQ6 530 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L19D6RCP7 530 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L20D6RJB6 530 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 SMIM22K7EJ46 135 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 COBLO75128 1261 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 IGHA2P01877 340 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 CYP2D6P10635 497 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 PLCG2P16885 1265 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP5P45974 858 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 ATP2B2Q01814 1243 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L24Q0WX57 530 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 OS9Q13438 667 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-220ENST00000454252 POLA2Q14181 598 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 GRB14Q14449 540 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 SEPT2Q15019 361 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 ABCB5Q2M3G0 1257 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 TRIM60Q495X7 471 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 TATDN1Q6P1N9 297 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 SAMD1Q6SPF0 538 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-220ENST00000454252 TRMT44Q8IYL2 757 aaKnown RBP8.59□□□□□ -1.03
CHEK2-220ENST00000454252 SLC44A5Q8NCS7 719 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 MYLIPQ8WY64 445 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 LPAR1Q92633 364 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 BADQ92934 168 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 FERMT2Q96AC1 680 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 TRIM43Q96BQ3 446 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-220ENST00000454252 LENG1Q96BZ8 264 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-220ENST00000454252 EAF2Q96CJ1 260 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-220ENST00000454252 TTYH1Q9H313 450 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-220ENST00000454252 HDAC5Q9UQL6 1122 aa8.59□□□□□ -1.03
CHEK2-220ENST00000454252 DNM1LO00429 736 aa8.58□□□□□ -1.04
CHEK2-220ENST00000454252 SURF6O75683 361 aaKnown RBP8.58□□□□□ -1.04
CHEK2-220ENST00000454252 CT47B1P0C2W7 299 aaPredicted RBP8.58□□□□□ -1.04
CHEK2-220ENST00000454252 ADORA2AP29274 412 aa8.58□□□□□ -1.04
CHEK2-220ENST00000454252 EPHB4P54760 987 aa8.58□□□□□ -1.04
CHEK2-220ENST00000454252 SLFNL1Q499Z3 407 aa8.58□□□□□ -1.04
CHEK2-220ENST00000454252 CERKLQ49MI3 558 aaPredicted RBP8.58□□□□□ -1.04
CHEK2-220ENST00000454252 FAM47AQ5JRC9 791 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms