RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 KIAA1211Q6ZU35 1233 aa23.74■■□□□ 1.39
PMPCB-205ENST00000453466 AKR1B1P15121 316 aa23.73■■□□□ 1.39
PMPCB-205ENST00000453466 TAF1CQ15572 869 aaPredicted RBP23.73■■□□□ 1.39
PMPCB-205ENST00000453466 ZFYVE28Q9HCC9 887 aa23.73■■□□□ 1.39
PMPCB-205ENST00000453466 ANO2Q9NQ90 1003 aa23.73■■□□□ 1.39
PMPCB-205ENST00000453466 PRDM10Q9NQV6 1147 aa23.73■■□□□ 1.39
PMPCB-205ENST00000453466 ZMYM6O95789 1325 aa23.73■■□□□ 1.39
PMPCB-205ENST00000453466 PDHXO00330 501 aa23.72■■□□□ 1.39
PMPCB-205ENST00000453466 GUCY1A2P33402 732 aa23.72■■□□□ 1.39
PMPCB-205ENST00000453466 HMGCS2P54868 508 aa23.72■■□□□ 1.39
PMPCB-205ENST00000453466 MTMR2Q13614 643 aa23.72■■□□□ 1.39
PMPCB-205ENST00000453466 SH3D19Q5HYK7 790 aa23.72■■□□□ 1.39
PMPCB-205ENST00000453466 PROCA1Q8NCQ7 364 aaPredicted RBP23.72■■□□□ 1.39
PMPCB-205ENST00000453466 DSCC1Q9BVC3 393 aa23.72■■□□□ 1.39
PMPCB-205ENST00000453466 LSG1Q9H089 658 aaKnown RBP23.72■■□□□ 1.39
PMPCB-205ENST00000453466 TMOD4Q9NZQ9 345 aa23.72■■□□□ 1.39
PMPCB-205ENST00000453466 ANAPC4Q9UJX5 808 aa23.72■■□□□ 1.39
PMPCB-205ENST00000453466 RASA1P20936 1047 aa23.71■■□□□ 1.39
PMPCB-205ENST00000453466 GPAT2Q6NUI2 795 aa23.71■■□□□ 1.39
PMPCB-205ENST00000453466 USP14P54578 494 aa23.7■■□□□ 1.38
PMPCB-205ENST00000453466 CTDSPL2Q05D32 466 aa23.7■■□□□ 1.38
PMPCB-205ENST00000453466 CRHR2Q13324 411 aa23.7■■□□□ 1.38
PMPCB-205ENST00000453466 FEZ1Q99689 392 aa23.7■■□□□ 1.38
PMPCB-205ENST00000453466 KANSL2Q9H9L4 492 aa23.7■■□□□ 1.38
PMPCB-205ENST00000453466 CTNNA3Q9UI47 895 aa23.7■■□□□ 1.38
PMPCB-205ENST00000453466 PRDM1O75626 825 aa23.69■■□□□ 1.38
PMPCB-205ENST00000453466 NOM1Q5C9Z4 860 aaKnown RBP23.69■■□□□ 1.38
PMPCB-205ENST00000453466 USP17L2Q6R6M4 530 aa23.69■■□□□ 1.38
PMPCB-205ENST00000453466 AGTPBP1Q9UPW5 1226 aa23.69■■□□□ 1.38
PMPCB-205ENST00000453466 SLC45A1Q9Y2W3 748 aa23.69■■□□□ 1.38
PMPCB-205ENST00000453466 ZNF213O14771 459 aa23.69■■□□□ 1.38
PMPCB-205ENST00000453466 PABPC4Q13310 644 aaKnown RBP eCLIP23.69■■□□□ 1.384e-8■□□□□ 10
PMPCB-205ENST00000453466 IL17RAQ96F46 866 aa23.69■■□□□ 1.38
PMPCB-205ENST00000453466 KIAA1683Q9H0B3 1180 aa23.69■■□□□ 1.38
PMPCB-205ENST00000453466 R3HDMLQ9H3Y0 253 aa23.69■■□□□ 1.38
PMPCB-205ENST00000453466 GPR25O00155 361 aa23.68■■□□□ 1.38
PMPCB-205ENST00000453466 MCCP23508 829 aa23.68■■□□□ 1.38
PMPCB-205ENST00000453466 ICA1Q05084 483 aa23.68■■□□□ 1.38
PMPCB-205ENST00000453466 ACER1Q8TDN7 264 aa23.68■■□□□ 1.38
PMPCB-205ENST00000453466 MAP4K1Q92918 833 aa23.68■■□□□ 1.38
PMPCB-205ENST00000453466 KIF2CQ99661 725 aa23.68■■□□□ 1.38
PMPCB-205ENST00000453466 ARHGEF10LQ9HCE6 1279 aa23.68■■□□□ 1.38
PMPCB-205ENST00000453466 LAMB1P07942 1786 aa23.67■■□□□ 1.38
PMPCB-205ENST00000453466 ANAPC15P60006 121 aa23.67■■□□□ 1.38
PMPCB-205ENST00000453466 PARK7Q99497 189 aaKnown RBP23.67■■□□□ 1.38
PMPCB-205ENST00000453466 SH2D4AQ9H788 454 aa23.67■■□□□ 1.38
PMPCB-205ENST00000453466 ATAD5Q96QE3 1844 aa23.67■■□□□ 1.38
PMPCB-205ENST00000453466 TSPY3P0CV98 308 aa23.66■■□□□ 1.38
PMPCB-205ENST00000453466 TSPY8P0CW00 308 aa23.66■■□□□ 1.38
PMPCB-205ENST00000453466 HSPA4P34932 840 aa23.66■■□□□ 1.38
PMPCB-205ENST00000453466 HAND2P61296 217 aa23.66■■□□□ 1.38
PMPCB-205ENST00000453466 TREML2Q5T2D2 321 aa23.66■■□□□ 1.38
PMPCB-205ENST00000453466 EMILIN3Q9NT22 766 aa23.66■■□□□ 1.38
PMPCB-205ENST00000453466 PNMA3Q9UL41 463 aa23.66■■□□□ 1.38
PMPCB-205ENST00000453466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.66■■□□□ 1.38
PMPCB-205ENST00000453466 TLR2O60603 784 aa23.65■■□□□ 1.38
PMPCB-205ENST00000453466 FGRP09769 529 aa23.65■■□□□ 1.38
PMPCB-205ENST00000453466 PCP11498 1178 aaKnown RBP23.65■■□□□ 1.38
PMPCB-205ENST00000453466 TFAP4Q01664 338 aa23.65■■□□□ 1.38
PMPCB-205ENST00000453466 DGKZQ13574 1117 aa23.65■■□□□ 1.38
PMPCB-205ENST00000453466 ZYXQ15942 572 aaKnown RBP23.65■■□□□ 1.38
PMPCB-205ENST00000453466 IMMTQ16891 758 aaKnown RBP23.65■■□□□ 1.38
PMPCB-205ENST00000453466 RNF41Q9H4P4 317 aaPredicted RBP23.65■■□□□ 1.38
PMPCB-205ENST00000453466 TOMM22Q9NS69 142 aa23.65■■□□□ 1.38
PMPCB-205ENST00000453466 PHIPQ8WWQ0 1821 aa23.65■■□□□ 1.38
PMPCB-205ENST00000453466 ORC4O43929 436 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 FKTNO75072 461 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 OSBPP22059 807 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 ATP2B2Q01814 1243 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 PTH1RQ03431 593 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 MFSD6Q6ZSS7 791 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 SIAH1Q8IUQ4 282 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 NEDD1Q8NHV4 660 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 ZNF296Q8WUU4 475 aaPredicted RBP23.64■■□□□ 1.38
PMPCB-205ENST00000453466 C12orf42Q96LP6 360 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.64■■□□□ 1.38
PMPCB-205ENST00000453466 INCENPQ9NQS7 918 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 TMX2Q9Y320 296 aa23.64■■□□□ 1.38
PMPCB-205ENST00000453466 A0A1W2PRG0 241 aa23.64■■□□□ 1.37
PMPCB-205ENST00000453466 RANBP6O60518 1105 aaKnown RBP23.64■■□□□ 1.37
PMPCB-205ENST00000453466 CYP2C8P10632 490 aa23.64■■□□□ 1.37
PMPCB-205ENST00000453466 EEF2P13639 858 aaKnown RBP23.64■■□□□ 1.37
PMPCB-205ENST00000453466 FAM47AQ5JRC9 791 aa23.64■■□□□ 1.37
PMPCB-205ENST00000453466 AKNAD1Q5T1N1 836 aa23.64■■□□□ 1.37
PMPCB-205ENST00000453466 IL27Q8NEV9 243 aa23.64■■□□□ 1.37
PMPCB-205ENST00000453466 TSPY2A6NKD2 308 aa23.63■■□□□ 1.37
PMPCB-205ENST00000453466 HOXA7P31268 230 aaPredicted RBP23.63■■□□□ 1.37
PMPCB-205ENST00000453466 CLEC10AQ8IUN9 316 aa23.63■■□□□ 1.37
PMPCB-205ENST00000453466 STAG1Q8WVM7 1258 aa23.63■■□□□ 1.37
PMPCB-205ENST00000453466 KCNB2Q92953 911 aa23.63■■□□□ 1.37
PMPCB-205ENST00000453466 IPO9Q96P70 1041 aaKnown RBP23.63■■□□□ 1.37
PMPCB-205ENST00000453466 NYAP2Q9P242 653 aa23.63■■□□□ 1.37
PMPCB-205ENST00000453466 U3KPZ7 1027 aaPredicted RBP23.63■■□□□ 1.37
PMPCB-205ENST00000453466 SP3Q02447 781 aa23.62■■□□□ 1.37
PMPCB-205ENST00000453466 NECTIN1Q15223 517 aa23.62■■□□□ 1.37
PMPCB-205ENST00000453466 RRP12Q5JTH9 1297 aaKnown RBP23.62■■□□□ 1.37
PMPCB-205ENST00000453466 PPP4R3BQ5MIZ7 849 aa23.62■■□□□ 1.37
PMPCB-205ENST00000453466 SMCR8Q8TEV9 937 aaPredicted RBP23.62■■□□□ 1.37
PMPCB-205ENST00000453466 IGKV6D-41A0A0C4DH26 115 aa23.61■■□□□ 1.37
PMPCB-205ENST00000453466 IRX3P78415 501 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms