RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 AFG3L2Q9Y4W6 797 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 TACC3Q9Y6A5 838 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 IGKV6D-41A0A0C4DH26 115 aa17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 CXCL11O14625 94 aa17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 RANBP6O60518 1105 aaKnown RBP17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 HSPA4P34932 840 aa17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 TFAP4Q01664 338 aa17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 SREBF2Q12772 1141 aa17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 GRM1Q13255 1194 aa17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 SNAPC2Q13487 334 aa17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
TRAPPC12-211ENST00000452495 TRIM75PA6NK02 468 aa17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 E7EWF7 191 aa17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 ZKSCAN1P17029 563 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 MCCP23508 829 aa17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 MKRN3Q13064 507 aaKnown RBP17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 KRT32Q14532 448 aa17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 RALYLQ86SE5 291 aaKnown RBP17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 CCDC84Q86UT8 332 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 NCOA7Q8NI08 942 aa17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 INCENPQ9NQS7 918 aa17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 SYNPO2Q9UMS6 1093 aa17.22■□□□□ 0.35
TRAPPC12-211ENST00000452495 A0A0G2JLL6 359 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 B4E1Z4 1266 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 C19orf81C9J6K1 198 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 CETPP11597 493 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 INHBEP58166 350 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 SPP2Q13103 211 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 FAM47AQ5JRC9 791 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 PRRT2Q7Z6L0 340 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 DNAJC5GQ8N7S2 189 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 KCNB2Q92953 911 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 MS4A4AQ96JQ5 239 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 FEZ1Q99689 392 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 KIAA1683Q9H0B3 1180 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 TCP11L1Q9NUJ3 509 aa17.21■□□□□ 0.35
TRAPPC12-211ENST00000452495 TESPA1A2RU30 521 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 USP17L10C9JJH3 530 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 AOC2O75106 756 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 KDM4AO75164 1064 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 USP14P54578 494 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 KIF23Q02241 960 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 MTMR2Q13614 643 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 CCDC178Q5BJE1 867 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 SH3D19Q5HYK7 790 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 IQCA1Q86XH1 822 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 CEP95Q96GE4 821 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 MTMR4Q9NYA4 1195 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 NYAP2Q9P242 653 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
TRAPPC12-211ENST00000452495 CCL15-CCL14A0A0B4J2E2 113 aa17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 TTLL1O95922 423 aa17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 NOVP48745 357 aa17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 BACE1P56817 501 aa17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 CCL15Q16663 113 aa17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 FASTKD5Q7L8L6 764 aaKnown RBP17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 PROCA1Q8NCQ7 364 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 TMX2Q9Y320 296 aa17.19■□□□□ 0.34
TRAPPC12-211ENST00000452495 A0A0G2JMZ2 1700 aa17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 TM4SF4P48230 202 aa17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 USP17L2Q6R6M4 530 aa17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 MB21D2Q8IYB1 491 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 ACER1Q8TDN7 264 aa17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 BRI3BPQ8WY22 251 aa17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 UBAC1Q9BSL1 405 aa17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 IL17RBQ9NRM6 502 aa17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 TMOD4Q9NZQ9 345 aa17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 CEP350Q5VT06 3117 aa17.18■□□□□ 0.34
TRAPPC12-211ENST00000452495 RLFQ13129 1914 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 A0A1W2PRG0 241 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 HMGCS2P54868 508 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 OTUD7BQ6GQQ9 843 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 SIAH1Q8IUQ4 282 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 LPAR1Q92633 364 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 MKL1Q969V6 931 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 ZIC5Q96T25 663 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 MTA3Q9BTC8 594 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 GOPCQ9HD26 462 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 ZSWIM5Q9P217 1185 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 TNKSO95271 1327 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 WDR19Q8NEZ3 1342 aa17.17■□□□□ 0.34
TRAPPC12-211ENST00000452495 NMT2O60551 498 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 ATP2B2Q01814 1243 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 MAP2K1Q02750 393 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 MOGSQ13724 837 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 SART3Q15020 963 aaKnown RBP17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 ANKRD23Q86SG2 305 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms