RNA–Protein interactions for RNA: ENST00000452065.5

HDLBP-224, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-224ENST00000452065 TACC3Q9Y6A5 838 aa13.19□□□□□ -0.3
HDLBP-224ENST00000452065 PLIN4Q96Q06 1357 aa13.19□□□□□ -0.3
HDLBP-224ENST00000452065 IGKV6D-41A0A0C4DH26 115 aa13.18□□□□□ -0.3
HDLBP-224ENST00000452065 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
HDLBP-224ENST00000452065 BACE1P56817 501 aa13.18□□□□□ -0.3
HDLBP-224ENST00000452065 TFAP4Q01664 338 aa13.18□□□□□ -0.3
HDLBP-224ENST00000452065 MKRN3Q13064 507 aaKnown RBP13.18□□□□□ -0.3
HDLBP-224ENST00000452065 COL13A1Q5TAT6 717 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-224ENST00000452065 TBC1D10CQ8IV04 446 aa13.18□□□□□ -0.3
HDLBP-224ENST00000452065 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
HDLBP-224ENST00000452065 CNNM2Q9H8M5 875 aa13.18□□□□□ -0.3
HDLBP-224ENST00000452065 ZCCHC17Q9NP64 241 aaKnown RBP13.18□□□□□ -0.3
HDLBP-224ENST00000452065 TCP11L1Q9NUJ3 509 aa13.18□□□□□ -0.3
HDLBP-224ENST00000452065 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-224ENST00000452065 CCL15-CCL14A0A0B4J2E2 113 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 NOVP48745 357 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 MOGSQ13724 837 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 CCL15Q16663 113 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 TSGA10IPQ3SY00 556 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 PPP4R3BQ5MIZ7 849 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 RNF20Q5VTR2 975 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 OTUD7BQ6GQQ9 843 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-224ENST00000452065 IFNL1Q8IU54 200 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 BRI3BPQ8WY22 251 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 ESR2Q92731 530 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 MKL1Q969V6 931 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 PTPN18Q99952 460 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 KRT23Q9C075 422 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 WBP1LQ9NX94 342 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 NYAP2Q9P242 653 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 SYNPO2Q9UMS6 1093 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 MYH4Q9Y623 1939 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 LOC285556D6RIA3 1793 aa13.17□□□□□ -0.3
HDLBP-224ENST00000452065 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 SLC27A2O14975 620 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 RANBP6O60518 1105 aaKnown RBP13.16□□□□□ -0.3
HDLBP-224ENST00000452065 ALDH1A1P00352 501 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
HDLBP-224ENST00000452065 USP14P54578 494 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 CREB3L3Q68CJ9 461 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 PROCA1Q8NCQ7 364 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-224ENST00000452065 KCNB2Q92953 911 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 TTC14Q96N46 770 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 IL17RBQ9NRM6 502 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 ZSWIM5Q9P217 1185 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 SLC45A1Q9Y2W3 748 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 TMX2Q9Y320 296 aa13.16□□□□□ -0.3
HDLBP-224ENST00000452065 A0A1W2PRG0 241 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 E7EWF7 191 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 CA12O43570 354 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 TTLL1O95922 423 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 ICA1Q05084 483 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 TRDNQ13061 729 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 MTMR2Q13614 643 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 GPAT2Q6NUI2 795 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 CEP95Q96GE4 821 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 CFHR5Q9BXR6 569 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 USP26Q9BXU7 913 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 TOMM22Q9NS69 142 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 SAGE1Q9NXZ1 904 aa13.15□□□□□ -0.3
HDLBP-224ENST00000452065 NEDD4P46934 1319 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 BTBD19C9JJ37 291 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 IGF2BP3O00425 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDLBP-224ENST00000452065 HSPA4P34932 840 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 HMGCS2P54868 508 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 CCDC178Q5BJE1 867 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
HDLBP-224ENST00000452065 NCOA7Q8NI08 942 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 LPAR1Q92633 364 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 BEGAINQ9BUH8 593 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 RNF186Q9NXI6 227 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 TMOD4Q9NZQ9 345 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 TAF6LQ9Y6J9 622 aa13.14□□□□□ -0.31
HDLBP-224ENST00000452065 B4E1Z4 1266 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 KDM4AO75164 1064 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 ZKSCAN1P17029 563 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-224ENST00000452065 HOXA7P31268 230 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-224ENST00000452065 PABPC4Q13310 644 aaKnown RBP eCLIP13.13□□□□□ -0.31
HDLBP-224ENST00000452065 GADL1Q6ZQY3 521 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 STOX1Q6ZVD7 989 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 IQCA1Q86XH1 822 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 DGKHQ86XP1 1220 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 FAM43AQ8N2R8 423 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 NKX2-3Q8TAU0 364 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 ANKS1AQ92625 1134 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 FEZ1Q99689 392 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms