RNA–Protein interactions for RNA: ENST00000452025.5

RPE-214, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3 BASIC

Gene RPE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-214ENST00000452025 EDC3Q96F86 508 aaKnown RBP13.22□□□□□ -0.29
RPE-214ENST00000452025 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
RPE-214ENST00000452025 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
RPE-214ENST00000452025 PARP14Q460N5 1801 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 SLC15A5A6NIM6 579 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 KBTBD13C9JR72 458 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 MSCO60682 206 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
RPE-214ENST00000452025 UQCRFS1P1P0C7P4 283 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 VCAM1P19320 739 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 ATP2B2Q01814 1243 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 MTX1Q13505 466 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 GRB14Q14449 540 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 SHHQ15465 462 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 TTC39AQ5SRH9 613 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 GJC2Q5T442 439 aaPredicted RBP13.21□□□□□ -0.29
RPE-214ENST00000452025 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 METTL16Q86W50 562 aaKnown RBP13.21□□□□□ -0.29
RPE-214ENST00000452025 TRPV1Q8NER1 839 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 NPLOC4Q8TAT6 608 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 LPAR1Q92633 364 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 CDCA7LQ96GN5 454 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 GINM1Q9NU53 330 aa13.21□□□□□ -0.29
RPE-214ENST00000452025 PLXNA1Q9UIW2 1896 aa13.21□□□□□ -0.3
RPE-214ENST00000452025 USP17L15C9J2P7 530 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 USP17L13C9JLJ4 530 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 USP17L11C9JVI0 530 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 USP17L18D6R9N7 530 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 USP17L22D6RA61 530 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 USP17L17D6RBQ6 530 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 USP17L19D6RCP7 530 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 USP17L20D6RJB6 530 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 GNAI3P08754 354 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 CYBAP13498 195 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 FOSL2P15408 326 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 PTPREP23469 700 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 DYNLL1P63167 89 aaKnown RBP13.2□□□□□ -0.3
RPE-214ENST00000452025 USP17L24Q0WX57 530 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 C12orf42Q96LP6 360 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 BTBD7Q9P203 1132 aa13.2□□□□□ -0.3
RPE-214ENST00000452025 COL11A1P12107 1806 aaPredicted RBP13.2□□□□□ -0.3
RPE-214ENST00000452025 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
RPE-214ENST00000452025 RAB3GAP1Q15042 981 aa13.19□□□□□ -0.3
RPE-214ENST00000452025 TRIM60Q495X7 471 aa13.19□□□□□ -0.3
RPE-214ENST00000452025 ATF7IPQ6VMQ6 1270 aa13.19□□□□□ -0.3
RPE-214ENST00000452025 FOXP4Q8IVH2 680 aaPredicted RBP13.19□□□□□ -0.3
RPE-214ENST00000452025 BADQ92934 168 aa13.19□□□□□ -0.3
RPE-214ENST00000452025 TTYH1Q9H313 450 aaPredicted RBP13.19□□□□□ -0.3
RPE-214ENST00000452025 PDLIM7Q9NR12 457 aa13.19□□□□□ -0.3
RPE-214ENST00000452025 ZNFX1Q9P2E3 1918 aaKnown RBP13.19□□□□□ -0.3
RPE-214ENST00000452025 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
RPE-214ENST00000452025 CYP2E1P05181 493 aaPredicted RBP13.18□□□□□ -0.3
RPE-214ENST00000452025 HOXC6P09630 235 aa13.18□□□□□ -0.3
RPE-214ENST00000452025 USP14P54578 494 aa13.18□□□□□ -0.3
RPE-214ENST00000452025 PPP4CP60510 307 aa13.18□□□□□ -0.3
RPE-214ENST00000452025 G3BP1Q13283 466 aaKnown RBP eCLIP13.18□□□□□ -0.3
RPE-214ENST00000452025 ACER1Q8TDN7 264 aa13.18□□□□□ -0.3
RPE-214ENST00000452025 DBNDD2Q9BQY9 259 aa13.18□□□□□ -0.3
RPE-214ENST00000452025 SEMA6BQ9H3T3 888 aa13.18□□□□□ -0.3
RPE-214ENST00000452025 RPAP3Q9H6T3 665 aaPredicted RBP13.18□□□□□ -0.3
RPE-214ENST00000452025 PRDM6Q9NQX0 595 aa13.18□□□□□ -0.3
RPE-214ENST00000452025 ADORA2AP29274 412 aa13.17□□□□□ -0.3
RPE-214ENST00000452025 ZAP70P43403 619 aa13.17□□□□□ -0.3
RPE-214ENST00000452025 USP5P45974 858 aa13.17□□□□□ -0.3
RPE-214ENST00000452025 SMAD3P84022 425 aaKnown RBP13.17□□□□□ -0.3
RPE-214ENST00000452025 SLC39A5Q6ZMH5 540 aa13.17□□□□□ -0.3
RPE-214ENST00000452025 CATSPERGQ6ZRH7 1159 aa13.17□□□□□ -0.3
RPE-214ENST00000452025 MIGA1Q8NAN2 632 aa13.17□□□□□ -0.3
RPE-214ENST00000452025 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
RPE-214ENST00000452025 PIH1D3Q9NQM4 214 aaKnown RBP13.17□□□□□ -0.3
RPE-214ENST00000452025 SMCHD1A6NHR9 2005 aa13.17□□□□□ -0.3
RPE-214ENST00000452025 CYP7A1P22680 504 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 OS9Q13438 667 aaPredicted RBP13.16□□□□□ -0.3
RPE-214ENST00000452025 SNX17Q15036 470 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 ABCB5Q2M3G0 1257 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 CCDC158Q5M9N0 1113 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 LBX2Q6XYB7 198 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 SH3RF1Q7Z6J0 888 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 ARRDC4Q8NCT1 418 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 FERMT2Q96AC1 680 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 RNPC3Q96LT9 517 aaKnown RBP13.16□□□□□ -0.3
RPE-214ENST00000452025 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
RPE-214ENST00000452025 TRIM43BA6NCK2 446 aa13.15□□□□□ -0.3
RPE-214ENST00000452025 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
RPE-214ENST00000452025 GNAI2P04899 355 aa13.15□□□□□ -0.3
RPE-214ENST00000452025 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
RPE-214ENST00000452025 ADCYAP1R1P41586 468 aa13.15□□□□□ -0.3
RPE-214ENST00000452025 CERKLQ49MI3 558 aaPredicted RBP13.15□□□□□ -0.3
RPE-214ENST00000452025 FAM47AQ5JRC9 791 aa13.15□□□□□ -0.3
RPE-214ENST00000452025 OLFML2BQ68BL8 750 aa13.15□□□□□ -0.3
RPE-214ENST00000452025 TATDN1Q6P1N9 297 aa13.15□□□□□ -0.3
RPE-214ENST00000452025 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
RPE-214ENST00000452025 MOV10L1Q9BXT6 1211 aaKnown RBP13.15□□□□□ -0.3
RPE-214ENST00000452025 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
RPE-214ENST00000452025 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
RPE-214ENST00000452025 BAZ2AQ9UIF9 1905 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms