RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 USP17L19D6RCP7 530 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 USP17L20D6RJB6 530 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 HOXC6P09630 235 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 FOSL2P15408 326 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 CYP2C19P33261 490 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 SMAD3P84022 425 aaKnown RBP16.84■□□□□ 0.29
CPSF7-207ENST00000449811 USP17L24Q0WX57 530 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 GRB14Q14449 540 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
CPSF7-207ENST00000449811 SYMPKQ92797 1274 aaKnown RBP16.84■□□□□ 0.29
CPSF7-207ENST00000449811 FEZ1Q99689 392 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 TTYH1Q9H313 450 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-207ENST00000449811 MUC3AQ02505 3323 aa16.84■□□□□ 0.29
CPSF7-207ENST00000449811 PPP4CP60510 307 aa16.83■□□□□ 0.28
CPSF7-207ENST00000449811 GJC2Q5T442 439 aaPredicted RBP16.83■□□□□ 0.28
CPSF7-207ENST00000449811 SLC39A5Q6ZMH5 540 aa16.83■□□□□ 0.28
CPSF7-207ENST00000449811 ARRDC4Q8NCT1 418 aa16.83■□□□□ 0.28
CPSF7-207ENST00000449811 TRPV1Q8NER1 839 aa16.83■□□□□ 0.28
CPSF7-207ENST00000449811 NPLOC4Q8TAT6 608 aa16.83■□□□□ 0.28
CPSF7-207ENST00000449811 BADQ92934 168 aa16.83■□□□□ 0.28
CPSF7-207ENST00000449811 C12orf42Q96LP6 360 aa16.83■□□□□ 0.28
CPSF7-207ENST00000449811 KBTBD13C9JR72 458 aa16.82■□□□□ 0.28
CPSF7-207ENST00000449811 GH2P01242 217 aa16.82■□□□□ 0.28
CPSF7-207ENST00000449811 HLA-DOAP06340 250 aa16.82■□□□□ 0.28
CPSF7-207ENST00000449811 UQCRFS1P1P0C7P4 283 aa16.82■□□□□ 0.28
CPSF7-207ENST00000449811 CYBAP13498 195 aa16.82■□□□□ 0.28
CPSF7-207ENST00000449811 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
CPSF7-207ENST00000449811 SAP30BPQ9UHR5 308 aaKnown RBP16.82■□□□□ 0.28
CPSF7-207ENST00000449811 NOB1Q9ULX3 412 aaKnown RBP16.82■□□□□ 0.28
CPSF7-207ENST00000449811 USP14P54578 494 aa16.81■□□□□ 0.28
CPSF7-207ENST00000449811 MTX1Q13505 466 aa16.81■□□□□ 0.28
CPSF7-207ENST00000449811 TRIM60Q495X7 471 aa16.81■□□□□ 0.28
CPSF7-207ENST00000449811 CATSPERGQ6ZRH7 1159 aa16.81■□□□□ 0.28
CPSF7-207ENST00000449811 ADGRA1Q86SQ6 560 aa16.81■□□□□ 0.28
CPSF7-207ENST00000449811 API5Q9BZZ5 524 aaKnown RBP16.81■□□□□ 0.28
CPSF7-207ENST00000449811 PDLIM7Q9NR12 457 aa16.81■□□□□ 0.28
CPSF7-207ENST00000449811 BTBD7Q9P203 1132 aa16.81■□□□□ 0.28
CPSF7-207ENST00000449811 IGHA2P01877 340 aa16.8■□□□□ 0.28
CPSF7-207ENST00000449811 SLFN5Q08AF3 891 aa16.8■□□□□ 0.28
CPSF7-207ENST00000449811 SNX17Q15036 470 aa16.8■□□□□ 0.28
CPSF7-207ENST00000449811 LBX2Q6XYB7 198 aa16.8■□□□□ 0.28
CPSF7-207ENST00000449811 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
CPSF7-207ENST00000449811 RLFQ13129 1914 aa16.8■□□□□ 0.28
CPSF7-207ENST00000449811 TMEM265A0A087WTH1 108 aa16.79■□□□□ 0.28
CPSF7-207ENST00000449811 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
CPSF7-207ENST00000449811 VCAM1P19320 739 aa16.79■□□□□ 0.28
CPSF7-207ENST00000449811 ANO1Q5XXA6 986 aa16.79■□□□□ 0.28
CPSF7-207ENST00000449811 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
CPSF7-207ENST00000449811 DPP9Q86TI2 863 aa16.79■□□□□ 0.28
CPSF7-207ENST00000449811 FOCADQ5VW36 1801 aa16.78■□□□□ 0.28
CPSF7-207ENST00000449811 TRIM43BA6NCK2 446 aa16.78■□□□□ 0.28
CPSF7-207ENST00000449811 SPDYE16A6NNV3 312 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-207ENST00000449811 SEPT4O43236 478 aa16.78■□□□□ 0.28
CPSF7-207ENST00000449811 GNAI3P08754 354 aa16.78■□□□□ 0.28
CPSF7-207ENST00000449811 RAB3GAP1Q15042 981 aa16.78■□□□□ 0.28
CPSF7-207ENST00000449811 OLFML2BQ68BL8 750 aa16.78■□□□□ 0.28
CPSF7-207ENST00000449811 TATDN1Q6P1N9 297 aa16.78■□□□□ 0.28
CPSF7-207ENST00000449811 TRIM43Q96BQ3 446 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-207ENST00000449811 KIAA1683Q9H0B3 1180 aa16.78■□□□□ 0.28
CPSF7-207ENST00000449811 CDK5RAP2Q96SN8 1893 aa16.78■□□□□ 0.28
CPSF7-207ENST00000449811 COL9A1P20849 921 aa16.77■□□□□ 0.28
CPSF7-207ENST00000449811 ADORA2AP29274 412 aa16.77■□□□□ 0.28
CPSF7-207ENST00000449811 ADCYAP1R1P41586 468 aa16.77■□□□□ 0.28
CPSF7-207ENST00000449811 G3BP1Q13283 466 aaKnown RBP eCLIP16.77■□□□□ 0.28
CPSF7-207ENST00000449811 TJAP1Q5JTD0 557 aa16.77■□□□□ 0.28
CPSF7-207ENST00000449811 TTC39AQ5SRH9 613 aa16.77■□□□□ 0.28
CPSF7-207ENST00000449811 C1orf53Q5VUE5 145 aa16.77■□□□□ 0.28
CPSF7-207ENST00000449811 ACER1Q8TDN7 264 aa16.77■□□□□ 0.28
CPSF7-207ENST00000449811 FERMT2Q96AC1 680 aa16.77■□□□□ 0.28
CPSF7-207ENST00000449811 RNPC3Q96LT9 517 aaKnown RBP16.77■□□□□ 0.28
CPSF7-207ENST00000449811 RPAP3Q9H6T3 665 aaPredicted RBP16.77■□□□□ 0.28
CPSF7-207ENST00000449811 DYNLL1P63167 89 aaKnown RBP16.76■□□□□ 0.27
CPSF7-207ENST00000449811 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
CPSF7-207ENST00000449811 TNFRSF10AO00220 468 aa16.75■□□□□ 0.27
CPSF7-207ENST00000449811 STRNO43815 780 aa16.75■□□□□ 0.27
CPSF7-207ENST00000449811 CYP2E1P05181 493 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-207ENST00000449811 LRRC41Q15345 812 aa16.75■□□□□ 0.27
CPSF7-207ENST00000449811 ABCB5Q2M3G0 1257 aa16.75■□□□□ 0.27
CPSF7-207ENST00000449811 CERKLQ49MI3 558 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-207ENST00000449811 CCDC158Q5M9N0 1113 aa16.75■□□□□ 0.27
CPSF7-207ENST00000449811 USP38Q8NB14 1042 aa16.75■□□□□ 0.27
CPSF7-207ENST00000449811 CDCA7LQ96GN5 454 aa16.75■□□□□ 0.27
CPSF7-207ENST00000449811 MOV10L1Q9BXT6 1211 aaKnown RBP16.75■□□□□ 0.27
CPSF7-207ENST00000449811 EHD4Q9H223 541 aa16.75■□□□□ 0.27
CPSF7-207ENST00000449811 TACC3Q9Y6A5 838 aa16.75■□□□□ 0.27
CPSF7-207ENST00000449811 TTC28Q96AY4 2481 aa16.74■□□□□ 0.27
CPSF7-207ENST00000449811 IGSF3O75054 1194 aa16.74■□□□□ 0.27
CPSF7-207ENST00000449811 ITGB8P26012 769 aa16.74■□□□□ 0.27
CPSF7-207ENST00000449811 USP5P45974 858 aa16.74■□□□□ 0.27
CPSF7-207ENST00000449811 TLE2Q04725 743 aa16.74■□□□□ 0.27
CPSF7-207ENST00000449811 GRIN2CQ14957 1233 aa16.74■□□□□ 0.27
CPSF7-207ENST00000449811 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
CPSF7-207ENST00000449811 ZNF236Q9UL36 1845 aa16.74■□□□□ 0.27
CPSF7-207ENST00000449811 COBLO75128 1261 aa16.73■□□□□ 0.27
CPSF7-207ENST00000449811 CLTBP09497 229 aa16.73■□□□□ 0.27
CPSF7-207ENST00000449811 CT47B1P0C2W7 299 aaPredicted RBP16.73■□□□□ 0.27
CPSF7-207ENST00000449811 ERCC3P19447 782 aa16.73■□□□□ 0.27
CPSF7-207ENST00000449811 CYP7A1P22680 504 aa16.73■□□□□ 0.27
CPSF7-207ENST00000449811 EPHB4P54760 987 aa16.73■□□□□ 0.27
CPSF7-207ENST00000449811 FAM47AQ5JRC9 791 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms