RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 USP17L12C9JPN9 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 USP17L11C9JVI0 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 USP17L21D6R901 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 USP17L18D6R9N7 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 USP17L22D6RA61 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 USP17L17D6RBQ6 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 USP17L19D6RCP7 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 USP17L20D6RJB6 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 USP17L24Q0WX57 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 SEPT2Q15019 361 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 LRRFIP1Q32MZ4 808 aaKnown RBP18.36■□□□□ 0.53
CHD3-205ENST00000449744 CCAR1Q8IX12 1150 aaKnown RBP18.36■□□□□ 0.53
CHD3-205ENST00000449744 SLC44A5Q8NCS7 719 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 GPRC5AQ8NFJ5 357 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 ACER1Q8TDN7 264 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 PXYLP1Q8TE99 480 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 DYNLL2Q96FJ2 89 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 ZFYP08048 801 aaPredicted RBP18.35■□□□□ 0.53
CHD3-205ENST00000449744 CCL5P13501 91 aa18.35■□□□□ 0.53
CHD3-205ENST00000449744 ELNP15502 786 aa18.35■□□□□ 0.53
CHD3-205ENST00000449744 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
CHD3-205ENST00000449744 C12orf60Q5U649 245 aa18.35■□□□□ 0.53
CHD3-205ENST00000449744 TMEM179Q6ZVK1 233 aa18.35■□□□□ 0.53
CHD3-205ENST00000449744 NKX2-3Q8TAU0 364 aa18.35■□□□□ 0.53
CHD3-205ENST00000449744 APPBP2Q92624 585 aa18.35■□□□□ 0.53
CHD3-205ENST00000449744 PAGR1Q9BTK6 254 aa18.35■□□□□ 0.53
CHD3-205ENST00000449744 RNF208Q9H0X6 261 aa18.35■□□□□ 0.53
CHD3-205ENST00000449744 RNF113AO15541 343 aaKnown RBP18.34■□□□□ 0.53
CHD3-205ENST00000449744 VCAM1P19320 739 aa18.34■□□□□ 0.53
CHD3-205ENST00000449744 CYP2D7A0A087X1C5 515 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 GLRX3O76003 335 aaKnown RBP18.33■□□□□ 0.52
CHD3-205ENST00000449744 INHAP05111 366 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 GJB1P08034 283 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 CDK8P49336 464 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 ANKRD45Q5TZF3 282 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 CATSPERGQ6ZRH7 1159 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 GCC1Q96CN9 775 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 CCDC17Q96LX7 622 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 STRBPQ96SI9 672 aaKnown RBP18.33■□□□□ 0.52
CHD3-205ENST00000449744 CWC22Q9HCG8 908 aaKnown RBP18.33■□□□□ 0.52
CHD3-205ENST00000449744 TXNRD2Q9NNW7 524 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 RBPJLQ9UBG7 517 aa18.33■□□□□ 0.52
CHD3-205ENST00000449744 ARPP21Q9UBL0 812 aaPredicted RBP18.33■□□□□ 0.52
CHD3-205ENST00000449744 BAZ2AQ9UIF9 1905 aaKnown RBP18.33■□□□□ 0.52
CHD3-205ENST00000449744 PEX10O60683 326 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 AKR1B1P15121 316 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 MX1P20591 662 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 MAPK4P31152 587 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 ERVK-9P63128 1117 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 ERVK-24P63145 666 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 CTR9Q6PD62 1173 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 C16orf86Q6ZW13 317 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 OSBP2Q969R2 916 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 RPAP3Q9H6T3 665 aaPredicted RBP18.32■□□□□ 0.52
CHD3-205ENST00000449744 ARHGEF10LQ9HCE6 1279 aa18.32■□□□□ 0.52
CHD3-205ENST00000449744 GNAT2P19087 354 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 GJA8P48165 433 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 ICA1Q05084 483 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 Q3C1V9 767 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 PI4K2BQ8TCG2 481 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
CHD3-205ENST00000449744 NUDT12Q9BQG2 462 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 FSD1Q9BTV5 496 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 SH2D4AQ9H788 454 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 RABGAP1Q9Y3P9 1069 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 MYH8P13535 1937 aa18.31■□□□□ 0.52
CHD3-205ENST00000449744 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
CHD3-205ENST00000449744 GPAA1O43292 621 aa18.3■□□□□ 0.52
CHD3-205ENST00000449744 APPP05067 770 aa18.3■□□□□ 0.52
CHD3-205ENST00000449744 CCNA1P78396 465 aa18.3■□□□□ 0.52
CHD3-205ENST00000449744 HDAC1Q13547 482 aaPredicted RBP18.3■□□□□ 0.52
CHD3-205ENST00000449744 AAMPQ13685 434 aa18.3■□□□□ 0.52
CHD3-205ENST00000449744 GIMAP6Q6P9H5 292 aa18.3■□□□□ 0.52
CHD3-205ENST00000449744 SOCS4Q8WXH5 440 aa18.3■□□□□ 0.52
CHD3-205ENST00000449744 GJD2Q9UKL4 321 aa18.3■□□□□ 0.52
CHD3-205ENST00000449744 DOCK3Q8IZD9 2030 aa18.3■□□□□ 0.52
CHD3-205ENST00000449744 HTTP42858 3142 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 GSG1L2A8MUP6 293 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 MINDY4BA8MYZ0 360 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 SMIM22K7EJ46 135 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 HMGCRP04035 888 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 CYP2B6P20813 491 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 TDO2P48775 406 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 SBK1Q52WX2 424 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 U2AF1L4Q8WU68 220 aaKnown RBP18.29■□□□□ 0.52
CHD3-205ENST00000449744 SHISA4Q96DD7 197 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 TANGO6Q9C0B7 1094 aa18.29■□□□□ 0.52
CHD3-205ENST00000449744 M0R2C6 588 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 ATP2B2Q01814 1243 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 COG2Q14746 738 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 WDR78Q5VTH9 848 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 GPR142Q7Z601 462 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 PLEKHH3Q7Z736 793 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 LPAR1Q92633 364 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 PORCNQ9H237 461 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 MKNK2Q9HBH9 465 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 TMX2Q9Y320 296 aa18.28■□□□□ 0.52
CHD3-205ENST00000449744 SPDYE16A6NNV3 312 aaPredicted RBP18.27■□□□□ 0.52
CHD3-205ENST00000449744 SGPL1O95470 568 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms