RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 USP17L22D6RA61 530 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 USP17L17D6RBQ6 530 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 USP17L19D6RCP7 530 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 USP17L20D6RJB6 530 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 MPHOSPH10O00566 681 aaKnown RBP16.55■□□□□ 0.24
TOM1-211ENST00000449508 ERVK-9P63128 1117 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 ERVK-24P63145 666 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 EVX2Q03828 476 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 GABPAQ06546 454 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 USP17L24Q0WX57 530 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 ACER1Q8TDN7 264 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 GTF3C2Q8WUA4 911 aaPredicted RBP16.55■□□□□ 0.24
TOM1-211ENST00000449508 KIAA1683Q9H0B3 1180 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 DDX60LQ5H9U9 1706 aaKnown RBP16.54■□□□□ 0.24
TOM1-211ENST00000449508 PRKAB2O43741 272 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 FARP2O94887 1054 aaPredicted RBP16.54■□□□□ 0.24
TOM1-211ENST00000449508 MBD4O95243 580 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 HMGCRP04035 888 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 CYP2D6P10635 497 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 CAPN2P17655 700 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 CYP2B6P20813 491 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 MAPK4P31152 587 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 GUCY1A2P33402 732 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 SEPT2Q15019 361 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 HABP4Q5JVS0 413 aaKnown RBP16.54■□□□□ 0.24
TOM1-211ENST00000449508 CATSPERGQ6ZRH7 1159 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 UBE2Q1Q7Z7E8 422 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 NUDT12Q9BQG2 462 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 HTATIP2Q9BUP3 242 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 PAK6Q9NQU5 681 aaPredicted RBP16.54■□□□□ 0.24
TOM1-211ENST00000449508 MYH7P12883 1935 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 PLXNB2O15031 1838 aa16.54■□□□□ 0.24
TOM1-211ENST00000449508 BAZ2AQ9UIF9 1905 aaKnown RBP16.53■□□□□ 0.24
TOM1-211ENST00000449508 H0YGN5 161 aa16.53■□□□□ 0.24
TOM1-211ENST00000449508 UBE3CQ15386 1083 aa16.53■□□□□ 0.24
TOM1-211ENST00000449508 ZSCAN25Q6NSZ9 544 aa16.53■□□□□ 0.24
TOM1-211ENST00000449508 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.53■□□□□ 0.24
TOM1-211ENST00000449508 PORCNQ9H237 461 aa16.53■□□□□ 0.24
TOM1-211ENST00000449508 CWC22Q9HCG8 908 aaKnown RBP16.53■□□□□ 0.24
TOM1-211ENST00000449508 ATP8A2Q9NTI2 1148 aa16.53■□□□□ 0.24
TOM1-211ENST00000449508 RABGAP1Q9Y3P9 1069 aa16.53■□□□□ 0.24
TOM1-211ENST00000449508 MYH8P13535 1937 aa16.53■□□□□ 0.24
TOM1-211ENST00000449508 RPTORQ8N122 1335 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 CHGBP05060 677 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 VCAM1P19320 739 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 TRIM32Q13049 653 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 POTEEQ6S8J3 1075 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 DYNLL2Q96FJ2 89 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 DCTPP1Q9H773 170 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 HMX1Q9NP08 348 aaPredicted RBP16.52■□□□□ 0.24
TOM1-211ENST00000449508 ECHDC1Q9NTX5 307 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
TOM1-211ENST00000449508 CCNA1P78396 465 aa16.51■□□□□ 0.23
TOM1-211ENST00000449508 GPR142Q7Z601 462 aa16.51■□□□□ 0.23
TOM1-211ENST00000449508 PLEKHH3Q7Z736 793 aa16.51■□□□□ 0.23
TOM1-211ENST00000449508 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
TOM1-211ENST00000449508 SOCS4Q8WXH5 440 aa16.51■□□□□ 0.23
TOM1-211ENST00000449508 TRIB2Q92519 343 aa16.51■□□□□ 0.23
TOM1-211ENST00000449508 DDRGK1Q96HY6 314 aa16.51■□□□□ 0.23
TOM1-211ENST00000449508 CRISPLD2Q9H0B8 497 aa16.51■□□□□ 0.23
TOM1-211ENST00000449508 RPAP3Q9H6T3 665 aaPredicted RBP16.51■□□□□ 0.23
TOM1-211ENST00000449508 COLQQ9Y215 455 aaPredicted RBP16.51■□□□□ 0.23
TOM1-211ENST00000449508 SLC4A4Q9Y6R1 1079 aa16.51■□□□□ 0.23
TOM1-211ENST00000449508 A0A1W2PRG0 241 aa16.5■□□□□ 0.23
TOM1-211ENST00000449508 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
TOM1-211ENST00000449508 USP17L21D6R901 530 aa16.5■□□□□ 0.23
TOM1-211ENST00000449508 CNMDO75829 334 aa16.5■□□□□ 0.23
TOM1-211ENST00000449508 XRCC5P13010 732 aaKnown RBP16.5■□□□□ 0.23
TOM1-211ENST00000449508 C12orf60Q5U649 245 aa16.5■□□□□ 0.23
TOM1-211ENST00000449508 TMEM179Q6ZVK1 233 aa16.5■□□□□ 0.23
TOM1-211ENST00000449508 PUS7LQ9H0K6 701 aaKnown RBP16.5■□□□□ 0.23
TOM1-211ENST00000449508 CYP2D7A0A087X1C5 515 aa16.49■□□□□ 0.23
TOM1-211ENST00000449508 GLRX3O76003 335 aaKnown RBP16.49■□□□□ 0.23
TOM1-211ENST00000449508 RGS2P41220 211 aa16.49■□□□□ 0.23
TOM1-211ENST00000449508 CDK8P49336 464 aa16.49■□□□□ 0.23
TOM1-211ENST00000449508 MORN1Q5T089 497 aa16.49■□□□□ 0.23
TOM1-211ENST00000449508 WDR78Q5VTH9 848 aa16.49■□□□□ 0.23
TOM1-211ENST00000449508 TRMT44Q8IYL2 757 aaKnown RBP16.49■□□□□ 0.23
TOM1-211ENST00000449508 USP6NLQ92738 828 aa16.49■□□□□ 0.23
TOM1-211ENST00000449508 GPATCH3Q96I76 525 aa16.49■□□□□ 0.23
TOM1-211ENST00000449508 PAWRQ96IZ0 340 aaKnown RBP16.49■□□□□ 0.23
TOM1-211ENST00000449508 NR2E3Q9Y5X4 410 aa16.49■□□□□ 0.23
TOM1-211ENST00000449508 SMIM22K7EJ46 135 aa16.48■□□□□ 0.23
TOM1-211ENST00000449508 AKR1B1P15121 316 aa16.48■□□□□ 0.23
TOM1-211ENST00000449508 ZKSCAN1P17029 563 aaPredicted RBP16.48■□□□□ 0.23
TOM1-211ENST00000449508 COG2Q14746 738 aa16.48■□□□□ 0.23
TOM1-211ENST00000449508 LBX2Q6XYB7 198 aa16.48■□□□□ 0.23
TOM1-211ENST00000449508 CCDC17Q96LX7 622 aa16.48■□□□□ 0.23
TOM1-211ENST00000449508 ARHGEF10LQ9HCE6 1279 aa16.48■□□□□ 0.23
TOM1-211ENST00000449508 HOXC10Q9NYD6 342 aa16.48■□□□□ 0.23
TOM1-211ENST00000449508 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
TOM1-211ENST00000449508 SPDYE16A6NNV3 312 aaPredicted RBP16.47■□□□□ 0.23
TOM1-211ENST00000449508 EVI5O60447 810 aa16.47■□□□□ 0.23
TOM1-211ENST00000449508 PRKAR2AP13861 404 aaKnown RBP16.47■□□□□ 0.23
TOM1-211ENST00000449508 CCL14Q16627 93 aa16.47■□□□□ 0.23
TOM1-211ENST00000449508 MAP3K21Q5TCX8 1036 aa16.47■□□□□ 0.23
TOM1-211ENST00000449508 CTR9Q6PD62 1173 aa16.47■□□□□ 0.23
TOM1-211ENST00000449508 NECAB2Q7Z6G3 386 aa16.47■□□□□ 0.23
TOM1-211ENST00000449508 KBTBD3Q8NAB2 608 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms