RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 ERVK-24P63145 666 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 USP17L24Q0WX57 530 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 UBE3CQ15386 1083 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 ZYXQ15942 572 aaKnown RBP13.05□□□□□ -0.32
SRRT-205ENST00000449389 ZSCAN25Q6NSZ9 544 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 UBE2Q1Q7Z7E8 422 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 SDR42E1Q8WUS8 393 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 SOCS4Q8WXH5 440 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 HTATIP2Q9BUP3 242 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 TXNRD2Q9NNW7 524 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 PAK6Q9NQU5 681 aaPredicted RBP13.05□□□□□ -0.32
SRRT-205ENST00000449389 ATP8A2Q9NTI2 1148 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 VCAM1P19320 739 aa13.04□□□□□ -0.32
SRRT-205ENST00000449389 CCAR1Q8IX12 1150 aaKnown RBP13.04□□□□□ -0.32
SRRT-205ENST00000449389 ACER1Q8TDN7 264 aa13.04□□□□□ -0.32
SRRT-205ENST00000449389 DEFB118Q96PH6 123 aa13.04□□□□□ -0.32
SRRT-205ENST00000449389 NUDT12Q9BQG2 462 aa13.04□□□□□ -0.32
SRRT-205ENST00000449389 PAGR1Q9BTK6 254 aa13.04□□□□□ -0.32
SRRT-205ENST00000449389 SWAP70Q9UH65 585 aa13.04□□□□□ -0.32
SRRT-205ENST00000449389 RABGAP1Q9Y3P9 1069 aa13.04□□□□□ -0.32
SRRT-205ENST00000449389 MPHOSPH10O00566 681 aaKnown RBP13.03□□□□□ -0.32
SRRT-205ENST00000449389 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
SRRT-205ENST00000449389 PEX10O60683 326 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 TFRCP02786 760 aaKnown RBP13.03□□□□□ -0.32
SRRT-205ENST00000449389 XRCC5P13010 732 aaKnown RBP13.03□□□□□ -0.32
SRRT-205ENST00000449389 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 CCNA1P78396 465 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 SEPT2Q15019 361 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 HABP4Q5JVS0 413 aaKnown RBP13.03□□□□□ -0.32
SRRT-205ENST00000449389 CATSPERGQ6ZRH7 1159 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 AMOTL1Q8IY63 956 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 DPF3Q92784 378 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 GPATCH3Q96I76 525 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.32
SRRT-205ENST00000449389 DCTPP1Q9H773 170 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 ECHDC1Q9NTX5 307 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 DOCK3Q8IZD9 2030 aa13.03□□□□□ -0.32
SRRT-205ENST00000449389 H0YGN5 161 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 PRKAB2O43741 272 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 CYP2D6P10635 497 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 CYP2B6P20813 491 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 EVX2Q03828 476 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 Q3C1V9 767 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 SLFNL1Q499Z3 407 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 LBX2Q6XYB7 198 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 GPR142Q7Z601 462 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 TRMT44Q8IYL2 757 aaKnown RBP13.02□□□□□ -0.33
SRRT-205ENST00000449389 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 PORCNQ9H237 461 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 CWC22Q9HCG8 908 aaKnown RBP13.02□□□□□ -0.33
SRRT-205ENST00000449389 HMX1Q9NP08 348 aaPredicted RBP13.02□□□□□ -0.33
SRRT-205ENST00000449389 RPTORQ8N122 1335 aa13.02□□□□□ -0.33
SRRT-205ENST00000449389 GLRX3O76003 335 aaKnown RBP13.01□□□□□ -0.33
SRRT-205ENST00000449389 RGS2P41220 211 aa13.01□□□□□ -0.33
SRRT-205ENST00000449389 C12orf60Q5U649 245 aa13.01□□□□□ -0.33
SRRT-205ENST00000449389 POTEEQ6S8J3 1075 aa13.01□□□□□ -0.33
SRRT-205ENST00000449389 SLC44A5Q8NCS7 719 aa13.01□□□□□ -0.33
SRRT-205ENST00000449389 TRIB2Q92519 343 aa13.01□□□□□ -0.33
SRRT-205ENST00000449389 USP6NLQ92738 828 aa13.01□□□□□ -0.33
SRRT-205ENST00000449389 DYNLL2Q96FJ2 89 aa13.01□□□□□ -0.33
SRRT-205ENST00000449389 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
SRRT-205ENST00000449389 RPAP3Q9H6T3 665 aaPredicted RBP13.01□□□□□ -0.33
SRRT-205ENST00000449389 SH2D4AQ9H788 454 aa13.01□□□□□ -0.33
SRRT-205ENST00000449389 A0A1W2PRG0 241 aa13□□□□□ -0.33
SRRT-205ENST00000449389 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
SRRT-205ENST00000449389 USP17L12C9JPN9 530 aa13□□□□□ -0.33
SRRT-205ENST00000449389 USP17L21D6R901 530 aa13□□□□□ -0.33
SRRT-205ENST00000449389 CNMDO75829 334 aa13□□□□□ -0.33
SRRT-205ENST00000449389 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
SRRT-205ENST00000449389 TRIM32Q13049 653 aa13□□□□□ -0.33
SRRT-205ENST00000449389 MORN1Q5T089 497 aa13□□□□□ -0.33
SRRT-205ENST00000449389 MAP3K21Q5TCX8 1036 aa13□□□□□ -0.33
SRRT-205ENST00000449389 ANKLE1Q8NAG6 615 aa13□□□□□ -0.33
SRRT-205ENST00000449389 APBA2Q99767 749 aa13□□□□□ -0.33
SRRT-205ENST00000449389 NR2E3Q9Y5X4 410 aa13□□□□□ -0.33
SRRT-205ENST00000449389 SLC4A4Q9Y6R1 1079 aa13□□□□□ -0.33
SRRT-205ENST00000449389 PLXNB2O15031 1838 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 CHGBP05060 677 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
SRRT-205ENST00000449389 AKR1B1P15121 316 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 CDK8P49336 464 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 ICA1Q05084 483 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 C16orf86Q6ZW13 317 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 KBTBD3Q8NAB2 608 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 LPAR1Q92633 364 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 PUS7LQ9H0K6 701 aaKnown RBP12.99□□□□□ -0.33
SRRT-205ENST00000449389 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 HOXC10Q9NYD6 342 aa12.99□□□□□ -0.33
SRRT-205ENST00000449389 ARPP21Q9UBL0 812 aaPredicted RBP12.99□□□□□ -0.33
SRRT-205ENST00000449389 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
SRRT-205ENST00000449389 CYP2D7A0A087X1C5 515 aa12.98□□□□□ -0.33
SRRT-205ENST00000449389 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
SRRT-205ENST00000449389 ZFYP08048 801 aaPredicted RBP12.98□□□□□ -0.33
SRRT-205ENST00000449389 MAP2K5Q13163 448 aa12.98□□□□□ -0.33
SRRT-205ENST00000449389 COG2Q14746 738 aa12.98□□□□□ -0.33
SRRT-205ENST00000449389 WDR78Q5VTH9 848 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms