RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 MTMR4Q9NYA4 1195 aa16.5■□□□□ 0.23
SHMT2-203ENST00000449049 ZBTB21Q9ULJ3 1066 aa16.5■□□□□ 0.23
SHMT2-203ENST00000449049 LIMCH1Q9UPQ0 1083 aa16.5■□□□□ 0.23
SHMT2-203ENST00000449049 APOBRQ0VD83 1088 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 IFIT1BQ5T764 474 aaKnown RBP16.49■□□□□ 0.23
SHMT2-203ENST00000449049 HSCBQ8IWL3 235 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.49■□□□□ 0.234e-7■■□□□ 12.9
SHMT2-203ENST00000449049 WRNIP1Q96S55 665 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 KANSL2Q9H9L4 492 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 TPCN1Q9ULQ1 816 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 FZD1Q9UP38 647 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 TRAF5O00463 557 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 PPP1R12BO60237 982 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-203ENST00000449049 SEPT2Q15019 361 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 MAP3K11Q16584 847 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
SHMT2-203ENST00000449049 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
SHMT2-203ENST00000449049 BRPF3Q9ULD4 1205 aa16.49■□□□□ 0.23
SHMT2-203ENST00000449049 K7ELQ4 463 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-203ENST00000449049 ITGBL1O95965 494 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-203ENST00000449049 ASNSP08243 561 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 INPP5BP32019 993 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 NOL9Q5SY16 702 aaKnown RBP16.48■□□□□ 0.23
SHMT2-203ENST00000449049 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 TTLL1O95922 423 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 ICA1Q05084 483 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 CLEC10AQ8IUN9 316 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 SCYL3Q8IZE3 742 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 ZNF274Q96GC6 653 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-203ENST00000449049 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-203ENST00000449049 NYAP2Q9P242 653 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 STX8Q9UNK0 236 aa16.48■□□□□ 0.23
SHMT2-203ENST00000449049 KLF18A0A0U1RQI7 1052 aa16.47■□□□□ 0.23
SHMT2-203ENST00000449049 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
SHMT2-203ENST00000449049 APOA5Q6Q788 366 aa16.47■□□□□ 0.23
SHMT2-203ENST00000449049 TMEM47Q9BQJ4 181 aa16.47■□□□□ 0.23
SHMT2-203ENST00000449049 MYH4Q9Y623 1939 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 LARGE1O95461 756 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 TOP1P11387 765 aaKnown RBP16.46■□□□□ 0.23
SHMT2-203ENST00000449049 YY1P25490 414 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 IREB2P48200 963 aaKnown RBP16.46■□□□□ 0.23
SHMT2-203ENST00000449049 FMR1Q06787 632 aaKnown RBP eCLIP16.46■□□□□ 0.23
SHMT2-203ENST00000449049 PRKG1Q13976 671 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 BECN1Q14457 450 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 ME3Q16798 604 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 SIAH1Q8IUQ4 282 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 ZNF654Q8IZM8 581 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 MKL1Q969V6 931 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 TMX3Q96JJ7 454 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 KAT14Q9H8E8 782 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 SH2B1Q9NRF2 756 aaPredicted RBP16.46■□□□□ 0.23
SHMT2-203ENST00000449049 NID2Q14112 1375 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 EEF2P13639 858 aaKnown RBP16.46■□□□□ 0.23
SHMT2-203ENST00000449049 PDIA3P30101 505 aaKnown RBP16.46■□□□□ 0.23
SHMT2-203ENST00000449049 RCAN1P53805 252 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 MAP3K9P80192 1104 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.46■□□□□ 0.23
SHMT2-203ENST00000449049 ZKSCAN4Q969J2 545 aaPredicted RBP16.46■□□□□ 0.23
SHMT2-203ENST00000449049 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
SHMT2-203ENST00000449049 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-203ENST00000449049 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 SYNPO2Q9UMS6 1093 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 TRPM7Q96QT4 1865 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 GOLGA8BA8MQT2 603 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 PFKFB2O60825 505 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 DDAH1O94760 285 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 FKBP1BP68106 108 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 TROAPQ12815 778 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 ARMC9Q7Z3E5 817 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 PNMA1Q8ND90 353 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 HPS5Q9UPZ3 1129 aa16.45■□□□□ 0.22
SHMT2-203ENST00000449049 ZBTB43O43298 467 aa16.44■□□□□ 0.22
SHMT2-203ENST00000449049 PTPRAP18433 802 aa16.44■□□□□ 0.22
SHMT2-203ENST00000449049 VGLL4Q14135 290 aa16.44■□□□□ 0.22
SHMT2-203ENST00000449049 SYNE3Q6ZMZ3 975 aa16.44■□□□□ 0.22
SHMT2-203ENST00000449049 MOB2Q70IA6 237 aa16.44■□□□□ 0.22
SHMT2-203ENST00000449049 ARHGEF10LQ9HCE6 1279 aa16.44■□□□□ 0.22
SHMT2-203ENST00000449049 PICK1Q9NRD5 415 aa16.44■□□□□ 0.22
SHMT2-203ENST00000449049 SNCAIPQ9Y6H5 919 aa16.44■□□□□ 0.22
SHMT2-203ENST00000449049 UNCXA6NJT0 531 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 USP17L5A8MUK1 530 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 CALM1P0DP23 149 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 CALM2P0DP24 149 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 CALM3P0DP25 149 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 ST3GAL1Q11201 340 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 CUL4AQ13619 759 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 TTLL12Q14166 644 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-203ENST00000449049 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 LRRC47Q8N1G4 583 aaKnown RBP16.43■□□□□ 0.22
SHMT2-203ENST00000449049 ZNF784Q8NCA9 323 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-203ENST00000449049 SMC1BQ8NDV3 1235 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 MYL10Q9BUA6 226 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 ZNF408Q9H9D4 720 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 PASKQ96RG2 1323 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 A0A1W2PRG0 241 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 CELF2O95319 508 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms