RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 TMEM179Q6ZVK1 233 aa24.45■■□□□ 1.5
PTX4-203ENST00000447419 CD99L2Q8TCZ2 262 aa24.45■■□□□ 1.5
PTX4-203ENST00000447419 TBC1D2Q9BYX2 928 aa24.45■■□□□ 1.5
PTX4-203ENST00000447419 HIP1O00291 1037 aa24.44■■□□□ 1.5
PTX4-203ENST00000447419 TLR2O60603 784 aa24.44■■□□□ 1.5
PTX4-203ENST00000447419 SH3D19Q5HYK7 790 aa24.44■■□□□ 1.5
PTX4-203ENST00000447419 TACC3Q9Y6A5 838 aa24.44■■□□□ 1.5
PTX4-203ENST00000447419 ROBO3Q96MS0 1386 aa24.44■■□□□ 1.5
PTX4-203ENST00000447419 ICA1Q05084 483 aa24.43■■□□□ 1.5
PTX4-203ENST00000447419 FAM47AQ5JRC9 791 aa24.43■■□□□ 1.5
PTX4-203ENST00000447419 PROCA1Q8NCQ7 364 aaPredicted RBP24.43■■□□□ 1.5
PTX4-203ENST00000447419 PARK7Q99497 189 aaKnown RBP24.43■■□□□ 1.5
PTX4-203ENST00000447419 CHMLP26374 656 aa24.42■■□□□ 1.5
PTX4-203ENST00000447419 SP3Q02447 781 aa24.42■■□□□ 1.5
PTX4-203ENST00000447419 SIAH1Q8IUQ4 282 aa24.42■■□□□ 1.5
PTX4-203ENST00000447419 SMCR8Q8TEV9 937 aaPredicted RBP24.42■■□□□ 1.5
PTX4-203ENST00000447419 CCDC17Q96LX7 622 aa24.42■■□□□ 1.5
PTX4-203ENST00000447419 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.42■■□□□ 1.5
PTX4-203ENST00000447419 ZCCHC17Q9NP64 241 aaKnown RBP24.42■■□□□ 1.5
PTX4-203ENST00000447419 PEX10O60683 326 aa24.41■■□□□ 1.5
PTX4-203ENST00000447419 USP17L2Q6R6M4 530 aa24.41■■□□□ 1.5
PTX4-203ENST00000447419 TICAM2Q86XR7 235 aa24.41■■□□□ 1.5
PTX4-203ENST00000447419 ARHGAP39Q9C0H5 1083 aa24.41■■□□□ 1.5
PTX4-203ENST00000447419 C19orf81C9J6K1 198 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 RAD21O60216 631 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 EEF2P13639 858 aaKnown RBP24.4■■□□□ 1.5
PTX4-203ENST00000447419 KIAA1755Q5JYT7 1200 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 ZNF444Q8N0Y2 327 aaPredicted RBP24.4■■□□□ 1.5
PTX4-203ENST00000447419 MCOLN1Q9GZU1 580 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 ASCC2Q9H1I8 757 aaPredicted RBP24.4■■□□□ 1.5
PTX4-203ENST00000447419 PTPRFP10586 1907 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 MFAP1P55081 439 aaKnown RBP24.4■■□□□ 1.5
PTX4-203ENST00000447419 C17orf99Q6UX52 265 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 SPICE1Q8N0Z3 855 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 KIAA1683Q9H0B3 1180 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 TOMM22Q9NS69 142 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 PPP4R2Q9NY27 417 aa24.4■■□□□ 1.5
PTX4-203ENST00000447419 ADGRA2Q96PE1 1338 aa24.39■■□□□ 1.5
PTX4-203ENST00000447419 SLC3A2P08195 630 aaKnown RBP24.39■■□□□ 1.49
PTX4-203ENST00000447419 PDE4BQ07343 736 aa24.39■■□□□ 1.49
PTX4-203ENST00000447419 ALX1Q15699 326 aa24.39■■□□□ 1.49
PTX4-203ENST00000447419 RRP12Q5JTH9 1297 aaKnown RBP24.39■■□□□ 1.49
PTX4-203ENST00000447419 VCAM1P19320 739 aa24.38■■□□□ 1.49
PTX4-203ENST00000447419 IRX3P78415 501 aaPredicted RBP24.38■■□□□ 1.49
PTX4-203ENST00000447419 NOM1Q5C9Z4 860 aaKnown RBP24.38■■□□□ 1.49
PTX4-203ENST00000447419 CTU1Q7Z7A3 348 aaKnown RBP24.38■■□□□ 1.49
PTX4-203ENST00000447419 ANKRD13CQ8N6S4 541 aa24.38■■□□□ 1.49
PTX4-203ENST00000447419 CHMP4CQ96CF2 233 aa24.38■■□□□ 1.49
PTX4-203ENST00000447419 TRIM17Q9Y577 477 aa24.38■■□□□ 1.49
PTX4-203ENST00000447419 OSBPP22059 807 aa24.37■■□□□ 1.49
PTX4-203ENST00000447419 TFAP4Q01664 338 aa24.37■■□□□ 1.49
PTX4-203ENST00000447419 P2RX7Q99572 595 aaKnown RBP24.37■■□□□ 1.49
PTX4-203ENST00000447419 NBPF3Q9H094 633 aa24.37■■□□□ 1.49
PTX4-203ENST00000447419 ARHGEF10LQ9HCE6 1279 aa24.37■■□□□ 1.49
PTX4-203ENST00000447419 SLC45A1Q9Y2W3 748 aa24.37■■□□□ 1.49
PTX4-203ENST00000447419 CAPN15O75808 1086 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 TSPY3P0CV98 308 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 TSPY8P0CW00 308 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 CTGFP29279 349 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 USP14P54578 494 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 SAMD1Q6SPF0 538 aaPredicted RBP24.36■■□□□ 1.49
PTX4-203ENST00000447419 TBC1D10CQ8IV04 446 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 NKX2-3Q8TAU0 364 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 ERO1AQ96HE7 468 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 RPAP3Q9H6T3 665 aaPredicted RBP24.36■■□□□ 1.49
PTX4-203ENST00000447419 KANSL2Q9H9L4 492 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 ZNF287Q9HBT7 754 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 PNMA3Q9UL41 463 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 TAOK2Q9UL54 1235 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.36■■□□□ 1.49
PTX4-203ENST00000447419 LOC285556D6RIA3 1793 aa24.36■■□□□ 1.49
PTX4-203ENST00000447419 RANBP6O60518 1105 aaKnown RBP24.35■■□□□ 1.49
PTX4-203ENST00000447419 NMT2O60551 498 aa24.35■■□□□ 1.49
PTX4-203ENST00000447419 PABPC4Q13310 644 aaKnown RBP eCLIP24.35■■□□□ 1.49
PTX4-203ENST00000447419 CEP95Q96GE4 821 aa24.35■■□□□ 1.49
PTX4-203ENST00000447419 ANAPC4Q9UJX5 808 aa24.35■■□□□ 1.49
PTX4-203ENST00000447419 LACTBP83111 547 aaPredicted RBP24.35■■□□□ 1.49
PTX4-203ENST00000447419 PTH1RQ03431 593 aa24.35■■□□□ 1.49
PTX4-203ENST00000447419 OTOP1Q7RTM1 612 aa24.35■■□□□ 1.49
PTX4-203ENST00000447419 C12orf42Q96LP6 360 aa24.35■■□□□ 1.49
PTX4-203ENST00000447419 CLIP2Q9UDT6 1046 aa24.35■■□□□ 1.49
PTX4-203ENST00000447419 TSPY2A6NKD2 308 aa24.34■■□□□ 1.49
PTX4-203ENST00000447419 BCRP11274 1271 aa24.34■■□□□ 1.49
PTX4-203ENST00000447419 RUFY2Q8WXA3 655 aa24.34■■□□□ 1.49
PTX4-203ENST00000447419 TANGO6Q9C0B7 1094 aa24.34■■□□□ 1.49
PTX4-203ENST00000447419 TMX2Q9Y320 296 aa24.34■■□□□ 1.49
PTX4-203ENST00000447419 MYH8P13535 1937 aa24.33■■□□□ 1.49
PTX4-203ENST00000447419 HOXA7P31268 230 aaPredicted RBP24.33■■□□□ 1.49
PTX4-203ENST00000447419 BMP2KLQ5H9B9 411 aa24.33■■□□□ 1.49
PTX4-203ENST00000447419 LRRC47Q8N1G4 583 aaKnown RBP24.33■■□□□ 1.49
PTX4-203ENST00000447419 PAGR1Q9BTK6 254 aa24.33■■□□□ 1.49
PTX4-203ENST00000447419 DSCC1Q9BVC3 393 aa24.33■■□□□ 1.49
PTX4-203ENST00000447419 EFCC1Q9HA90 598 aa24.33■■□□□ 1.49
PTX4-203ENST00000447419 ZSWIM8A7E2V4 1837 aa24.33■■□□□ 1.49
PTX4-203ENST00000447419 IGKV6D-41A0A0C4DH26 115 aa24.32■■□□□ 1.48
PTX4-203ENST00000447419 ZNF213O14771 459 aa24.32■■□□□ 1.48
PTX4-203ENST00000447419 SGSM2O43147 1006 aa24.32■■□□□ 1.48
PTX4-203ENST00000447419 PSMC4P43686 418 aa24.32■■□□□ 1.48
PTX4-203ENST00000447419 HERVK_113P62684 666 aa24.32■■□□□ 1.48
PTX4-203ENST00000447419 NUP88Q99567 741 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms