RNA–Protein interactions for RNA: ENST00000447132.5

NIFK-203, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-203ENST00000447132 PIWIL2Q8TC59 973 aaKnown RBP6.92□□□□□ -1.3
NIFK-203ENST00000447132 PPP1R13LQ8WUF5 828 aa6.92□□□□□ -1.3
NIFK-203ENST00000447132 CYB5D2Q8WUJ1 264 aa6.92□□□□□ -1.3
NIFK-203ENST00000447132 ZNF296Q8WUU4 475 aaPredicted RBP6.92□□□□□ -1.3
NIFK-203ENST00000447132 ZNF428Q96B54 188 aa6.92□□□□□ -1.3
NIFK-203ENST00000447132 ASIC4Q96FT7 647 aa6.92□□□□□ -1.3
NIFK-203ENST00000447132 DPH2Q9BQC3 489 aaPredicted RBP6.92□□□□□ -1.3
NIFK-203ENST00000447132 MBNL3Q9NUK0 354 aaKnown RBP6.92□□□□□ -1.3
NIFK-203ENST00000447132 REV1Q9UBZ9 1251 aa6.92□□□□□ -1.3
NIFK-203ENST00000447132 BIN1O00499 593 aa6.91□□□□□ -1.3
NIFK-203ENST00000447132 HTR3BO95264 441 aa6.91□□□□□ -1.3
NIFK-203ENST00000447132 TXKP42681 527 aa6.91□□□□□ -1.3
NIFK-203ENST00000447132 CWF19L2Q2TBE0 894 aaKnown RBP6.91□□□□□ -1.3
NIFK-203ENST00000447132 ATG4DQ86TL0 474 aaPredicted RBP6.91□□□□□ -1.3
NIFK-203ENST00000447132 FBXO27Q8NI29 283 aa6.91□□□□□ -1.3
NIFK-203ENST00000447132 CHURC1-FNTBB4DL54 471 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 GRIN3BO60391 1043 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 ATE1O95260 518 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 ZP2Q05996 745 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 TNK2Q07912 1038 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 IKZF1Q13422 519 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 MLECQ14165 292 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 CDKAL1Q5VV42 579 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 CCDC74BQ96LY2 380 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 BACH2Q9BYV9 841 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 ADAMTS6Q9UKP5 1117 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 RNF114Q9Y508 228 aa6.9□□□□□ -1.3
NIFK-203ENST00000447132 NT5C1AQ9BXI3 368 aa6.89□□□□□ -1.31
NIFK-203ENST00000447132 RC3H2Q9HBD1 1191 aaKnown RBP6.89□□□□□ -1.31
NIFK-203ENST00000447132 METTL5Q9NRN9 209 aaKnown RBP6.89□□□□□ -1.31
NIFK-203ENST00000447132 ADAMTS1Q9UHI8 967 aa6.89□□□□□ -1.31
NIFK-203ENST00000447132 SLC22A31A6NKX4 558 aa6.88□□□□□ -1.31
NIFK-203ENST00000447132 H3BS24 57 aa6.88□□□□□ -1.31
NIFK-203ENST00000447132 TLR3O15455 904 aaKnown RBP6.88□□□□□ -1.31
NIFK-203ENST00000447132 VAMP1P23763 118 aa6.88□□□□□ -1.31
NIFK-203ENST00000447132 REXO1Q8N1G1 1221 aaKnown RBP6.88□□□□□ -1.31
NIFK-203ENST00000447132 UBE2FQ969M7 185 aa6.88□□□□□ -1.31
NIFK-203ENST00000447132 Q96M66 194 aa6.88□□□□□ -1.31
NIFK-203ENST00000447132 EHMT1Q9H9B1 1298 aa6.88□□□□□ -1.31
NIFK-203ENST00000447132 BRMS1Q9HCU9 246 aa6.88□□□□□ -1.31
NIFK-203ENST00000447132 ATP13A1Q9HD20 1204 aa6.88□□□□□ -1.31
NIFK-203ENST00000447132 KCNH3Q9ULD8 1083 aa6.88□□□□□ -1.31
NIFK-203ENST00000447132 PAPLNO95428 1278 aa6.87□□□□□ -1.31
NIFK-203ENST00000447132 ZNF76P36508 570 aa6.87□□□□□ -1.31
NIFK-203ENST00000447132 LRRN4CLQ8ND94 238 aa6.87□□□□□ -1.31
NIFK-203ENST00000447132 RNF141Q8WVD5 230 aa6.87□□□□□ -1.31
NIFK-203ENST00000447132 DUSP15Q9H1R2 295 aaPredicted RBP6.87□□□□□ -1.31
NIFK-203ENST00000447132 ZSWIM5Q9P217 1185 aa6.87□□□□□ -1.31
NIFK-203ENST00000447132 PCDHB14Q9Y5E9 798 aa6.87□□□□□ -1.31
NIFK-203ENST00000447132 RGS13O14921 159 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 DNAJA2O60884 412 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 SRFP11831 508 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 CRKP46108 304 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 TMPRSS7Q7RTY8 843 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 SLITRK4Q8IW52 837 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 FLAD1Q8NFF5 587 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 BAHD1Q8TBE0 780 aaPredicted RBP6.86□□□□□ -1.31
NIFK-203ENST00000447132 KRTAP9-2Q9BYQ4 174 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 GPR62Q9BZJ7 368 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 TRIT1Q9H3H1 467 aaKnown RBP6.86□□□□□ -1.31
NIFK-203ENST00000447132 CARS2Q9HA77 564 aaKnown RBP6.86□□□□□ -1.31
NIFK-203ENST00000447132 KLHL3Q9UH77 587 aa6.86□□□□□ -1.31
NIFK-203ENST00000447132 SHROOM4Q9ULL8 1493 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 GBP1P32455 592 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 TNNI2P48788 182 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 RBM25P49756 843 aaKnown RBP6.85□□□□□ -1.31
NIFK-203ENST00000447132 ZNF165P49910 485 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 FANCCQ00597 558 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 CDCP2Q5VXM1 449 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 PHACTR4Q8IZ21 702 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 NKD1Q969G9 470 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 VWCEQ96DN2 955 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 CCDC120Q96HB5 630 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 KREMEN1Q96MU8 473 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 PRDM7Q9NQW5 492 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 UBP1Q9NZI7 540 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 GMIPQ9P107 970 aa6.85□□□□□ -1.31
NIFK-203ENST00000447132 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
NIFK-203ENST00000447132 APOBRQ0VD83 1088 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 LRRFIP1Q32MZ4 808 aaKnown RBP6.84□□□□□ -1.31
NIFK-203ENST00000447132 SEZ6Q53EL9 994 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 KIAA0825Q8IV33 1275 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 DTWD2Q8NBA8 298 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 RNF34Q969K3 372 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 EAF1Q96JC9 268 aaPredicted RBP6.84□□□□□ -1.31
NIFK-203ENST00000447132 KIF2CQ99661 725 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 SPON2Q9BUD6 331 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 ASPNQ9BXN1 380 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 GPATCH2Q9NW75 528 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 CTNND2Q9UQB3 1225 aa6.84□□□□□ -1.31
NIFK-203ENST00000447132 ESR1P03372 595 aa6.83□□□□□ -1.32
NIFK-203ENST00000447132 TPP2P29144 1249 aaPredicted RBP6.83□□□□□ -1.32
NIFK-203ENST00000447132 AFMP43652 599 aa6.83□□□□□ -1.32
NIFK-203ENST00000447132 CLCQ05315 142 aa6.83□□□□□ -1.32
NIFK-203ENST00000447132 ARSHQ5FYA8 562 aa6.83□□□□□ -1.32
NIFK-203ENST00000447132 USP48Q86UV5 1035 aa6.83□□□□□ -1.32
NIFK-203ENST00000447132 TMEM40Q8WWA1 233 aa6.83□□□□□ -1.32
NIFK-203ENST00000447132 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.83□□□□□ -1.32
NIFK-203ENST00000447132 CNNM2Q9H8M5 875 aa6.83□□□□□ -1.32
NIFK-203ENST00000447132 CARMIL2Q6F5E8 1435 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms