RNA–Protein interactions for RNA: ENST00000447132.5

NIFK-203, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-203ENST00000447132 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
NIFK-203ENST00000447132 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
NIFK-203ENST00000447132 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
NIFK-203ENST00000447132 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
NIFK-203ENST00000447132 FOXD1Q16676 465 aa19.34■□□□□ 0.69
NIFK-203ENST00000447132 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
NIFK-203ENST00000447132 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
NIFK-203ENST00000447132 ADRA2BP18089 450 aa18.4■□□□□ 0.54
NIFK-203ENST00000447132 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
NIFK-203ENST00000447132 MSH5O43196 834 aa17.96■□□□□ 0.47
NIFK-203ENST00000447132 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
NIFK-203ENST00000447132 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
NIFK-203ENST00000447132 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
NIFK-203ENST00000447132 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
NIFK-203ENST00000447132 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
NIFK-203ENST00000447132 CNKSR2Q8WXI2 1034 aa16.48■□□□□ 0.23
NIFK-203ENST00000447132 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
NIFK-203ENST00000447132 KCNA4P22459 653 aa16.21■□□□□ 0.19
NIFK-203ENST00000447132 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
NIFK-203ENST00000447132 HOXD11P31277 338 aaPredicted RBP16.2■□□□□ 0.18
NIFK-203ENST00000447132 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
NIFK-203ENST00000447132 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
NIFK-203ENST00000447132 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
NIFK-203ENST00000447132 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
NIFK-203ENST00000447132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.067e-11■□□□□ 10.2
NIFK-203ENST00000447132 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
NIFK-203ENST00000447132 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
NIFK-203ENST00000447132 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
NIFK-203ENST00000447132 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
NIFK-203ENST00000447132 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
NIFK-203ENST00000447132 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
NIFK-203ENST00000447132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
NIFK-203ENST00000447132 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
NIFK-203ENST00000447132 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
NIFK-203ENST00000447132 ZBTB22O15209 634 aa14.89□□□□□ -0.03
NIFK-203ENST00000447132 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
NIFK-203ENST00000447132 APLP2Q06481 763 aa14.82□□□□□ -0.04
NIFK-203ENST00000447132 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
NIFK-203ENST00000447132 CAPN15O75808 1086 aa14.69□□□□□ -0.06
NIFK-203ENST00000447132 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
NIFK-203ENST00000447132 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
NIFK-203ENST00000447132 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
NIFK-203ENST00000447132 ATXN8OSP0DMR3 200 aa14.57□□□□□ -0.08
NIFK-203ENST00000447132 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
NIFK-203ENST00000447132 DSG3P32926 999 aa14.53□□□□□ -0.08
NIFK-203ENST00000447132 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
NIFK-203ENST00000447132 ABCB7O75027 752 aa14.36□□□□□ -0.11
NIFK-203ENST00000447132 POLA2Q14181 598 aa14.32□□□□□ -0.12
NIFK-203ENST00000447132 ZBTB12Q9Y330 459 aaPredicted RBP14.1□□□□□ -0.15
NIFK-203ENST00000447132 FBLN2P98095 1184 aa13.94□□□□□ -0.18
NIFK-203ENST00000447132 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
NIFK-203ENST00000447132 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
NIFK-203ENST00000447132 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
NIFK-203ENST00000447132 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
NIFK-203ENST00000447132 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
NIFK-203ENST00000447132 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
NIFK-203ENST00000447132 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
NIFK-203ENST00000447132 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
NIFK-203ENST00000447132 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
NIFK-203ENST00000447132 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
NIFK-203ENST00000447132 SPDYE4A6NLX3 237 aa13.46□□□□□ -0.25
NIFK-203ENST00000447132 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
NIFK-203ENST00000447132 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
NIFK-203ENST00000447132 SPDYE1Q8NFV5 336 aaPredicted RBP13.34□□□□□ -0.27
NIFK-203ENST00000447132 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
NIFK-203ENST00000447132 FKBP8Q14318 412 aa13.25□□□□□ -0.29
NIFK-203ENST00000447132 PROM2Q8N271 834 aa13.25□□□□□ -0.29
NIFK-203ENST00000447132 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
NIFK-203ENST00000447132 STAG3Q9UJ98 1225 aa13.2□□□□□ -0.3
NIFK-203ENST00000447132 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
NIFK-203ENST00000447132 POTEHQ6S545 545 aa13.16□□□□□ -0.3
NIFK-203ENST00000447132 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
NIFK-203ENST00000447132 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
NIFK-203ENST00000447132 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
NIFK-203ENST00000447132 CHADLQ6NUI6 762 aa12.92□□□□□ -0.34
NIFK-203ENST00000447132 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
NIFK-203ENST00000447132 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
NIFK-203ENST00000447132 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
NIFK-203ENST00000447132 MIER1Q8N108 512 aa12.81□□□□□ -0.36
NIFK-203ENST00000447132 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
NIFK-203ENST00000447132 HAX1O00165 279 aa12.77□□□□□ -0.37
NIFK-203ENST00000447132 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
NIFK-203ENST00000447132 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
NIFK-203ENST00000447132 NPM1P06748 294 aaKnown RBP eCLIP12.73□□□□□ -0.37
NIFK-203ENST00000447132 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
NIFK-203ENST00000447132 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
NIFK-203ENST00000447132 ZBTB47Q9UFB7 747 aaPredicted RBP12.67□□□□□ -0.38
NIFK-203ENST00000447132 EVX2Q03828 476 aa12.63□□□□□ -0.39
NIFK-203ENST00000447132 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
NIFK-203ENST00000447132 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
NIFK-203ENST00000447132 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
NIFK-203ENST00000447132 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
NIFK-203ENST00000447132 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
NIFK-203ENST00000447132 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
NIFK-203ENST00000447132 NUBP1P53384 320 aa12.5□□□□□ -0.41
NIFK-203ENST00000447132 CLCN6P51797 869 aa12.48□□□□□ -0.41
NIFK-203ENST00000447132 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
NIFK-203ENST00000447132 ZNF579Q8NAF0 562 aaKnown RBP12.46□□□□□ -0.41
NIFK-203ENST00000447132 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
NIFK-203ENST00000447132 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms