RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 BLMP54132 1417 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-206ENST00000447024 SOX1O00570 391 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-206ENST00000447024 NOM1Q5C9Z4 860 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-206ENST00000447024 PMEPA1Q969W9 287 aa10.67□□□□□ -0.7
SMARCE1-206ENST00000447024 HSPA5P11021 654 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 MZF1P28698 734 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 FAM196AQ6ZSG2 479 aa10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 VN1R5Q7Z5H4 357 aa10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 BSNDQ8WZ55 320 aa10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 NXPE3Q969Y0 559 aa10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 OSMRQ99650 979 aa10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 ZKSCAN3Q9BRR0 538 aa10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 TMPRSS13Q9BYE2 586 aa10.66□□□□□ -0.7
SMARCE1-206ENST00000447024 KIF24Q5T7B8 1368 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 CCDC7Q96M83 1385 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 FYB1O15117 783 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 TIAF1O95411 115 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 F13BP05160 661 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 PDE3BQ13370 1112 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 IKBKEQ14164 716 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 TOM1L2Q6ZVM7 507 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 SMG8Q8ND04 991 aaKnown RBP10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 TTC16Q8NEE8 873 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 USP26Q9BXU7 913 aa10.65□□□□□ -0.7
SMARCE1-206ENST00000447024 CGNL1Q0VF96 1302 aa10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 LOC100289279A0A1B0GTE1 492 aa10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 MPSTP25325 297 aa10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 EIF1AXP47813 144 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 FBXL6Q8N531 539 aa10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 C12orf50Q8NA57 414 aaPredicted RBP10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 GIMAP7Q8NHV1 300 aa10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 IP6K1Q92551 441 aa10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 ATG3Q9NT62 314 aa10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 PARP4Q9UKK3 1724 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 RTL1A6NKG5 1358 aa10.64□□□□□ -0.71
SMARCE1-206ENST00000447024 MYOM1P52179 1685 aa10.63□□□□□ -0.71
SMARCE1-206ENST00000447024 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
SMARCE1-206ENST00000447024 EREGO14944 169 aa10.63□□□□□ -0.71
SMARCE1-206ENST00000447024 MSMPQ1L6U9 139 aa10.63□□□□□ -0.71
SMARCE1-206ENST00000447024 SUGCTQ9HAC7 445 aa10.63□□□□□ -0.71
SMARCE1-206ENST00000447024 CYP4F12Q9HCS2 524 aa10.63□□□□□ -0.71
SMARCE1-206ENST00000447024 USP35Q9P2H5 1018 aa10.63□□□□□ -0.71
SMARCE1-206ENST00000447024 LEMD3Q9Y2U8 911 aa10.63□□□□□ -0.71
SMARCE1-206ENST00000447024 DISP2A7MBM2 1401 aa10.62□□□□□ -0.71
SMARCE1-206ENST00000447024 BCL9O00512 1426 aa10.62□□□□□ -0.71
SMARCE1-206ENST00000447024 DLGAP3O95886 979 aa10.62□□□□□ -0.71
SMARCE1-206ENST00000447024 ABI1Q8IZP0 508 aa10.62□□□□□ -0.71
SMARCE1-206ENST00000447024 OSBPL1AQ9BXW6 950 aa10.62□□□□□ -0.71
SMARCE1-206ENST00000447024 LTN1O94822 1766 aa10.62□□□□□ -0.71
SMARCE1-206ENST00000447024 NSD3Q9BZ95 1437 aa10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 FAM208AQ9UK61 1670 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 AMPHP49418 695 aa10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 DDB1Q16531 1140 aa10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 SOX17Q9H6I2 414 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 POLIQ9UNA4 740 aa10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 ANGEL1Q9UNK9 670 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 RGPD5Q99666 1765 aa10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 NSD2O96028 1365 aa10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 KIF20BQ96Q89 1820 aa10.61□□□□□ -0.71
SMARCE1-206ENST00000447024 MAP3K19Q56UN5 1328 aa10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 PHACTR2O75167 634 aa10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 EDN3P14138 238 aa10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 FOSL1P15407 271 aa10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 CPSF6Q16630 551 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 SHISA5Q8N114 240 aa10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 ASAP3Q8TDY4 903 aa10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 ANKRD24Q8TF21 1146 aa10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 RGPD1P0DJD0 1748 aa10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 PARD3Q8TEW0 1356 aa10.6□□□□□ -0.71
SMARCE1-206ENST00000447024 OVOS2A0A0G2JMS6 1433 aa10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 FAM95CA0A1B0GW59 222 aa10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 EXOC5O00471 708 aa10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 TNFRSF21O75509 655 aa10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 DRD2P14416 443 aa10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 HOXC9P31274 260 aa10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 CDPF1Q6NVV7 123 aa10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 SNX29Q8TEQ0 813 aa10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 GTF3C2Q8WUA4 911 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 BHLHE41Q9C0J9 482 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 NLRP2Q9NX02 1062 aa10.59□□□□□ -0.71
SMARCE1-206ENST00000447024 INSRP06213 1382 aa10.58□□□□□ -0.72
SMARCE1-206ENST00000447024 FLT4P35916 1363 aa10.58□□□□□ -0.72
SMARCE1-206ENST00000447024 ESRRAP11474 423 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-206ENST00000447024 NFKBIBQ15653 356 aa10.58□□□□□ -0.72
SMARCE1-206ENST00000447024 FBLIM1Q8WUP2 373 aa10.58□□□□□ -0.72
SMARCE1-206ENST00000447024 CCDC39Q9UFE4 941 aa10.58□□□□□ -0.72
SMARCE1-206ENST00000447024 FOXD3Q9UJU5 478 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-206ENST00000447024 WNK3Q9BYP7 1800 aa10.58□□□□□ -0.72
SMARCE1-206ENST00000447024 SMG6Q86US8 1419 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-206ENST00000447024 IL2RBP14784 551 aa10.57□□□□□ -0.72
SMARCE1-206ENST00000447024 USP11P51784 963 aa10.57□□□□□ -0.72
SMARCE1-206ENST00000447024 MTMR3Q13615 1198 aa10.57□□□□□ -0.72
SMARCE1-206ENST00000447024 EXOSC6Q5RKV6 272 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-206ENST00000447024 ALKBH2Q6NS38 261 aa10.57□□□□□ -0.72
SMARCE1-206ENST00000447024 PAOXQ6QHF9 649 aa10.57□□□□□ -0.72
SMARCE1-206ENST00000447024 C2CD4AQ8NCU7 369 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-206ENST00000447024 CCDC97Q96F63 343 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-206ENST00000447024 LATS2Q9NRM7 1088 aa10.57□□□□□ -0.72
SMARCE1-206ENST00000447024 TNS2Q63HR2 1409 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms