RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 TRPA1O75762 1119 aa26.1■■□□□ 1.77
APOE-204ENST00000446996 SEPT2Q15019 361 aa26.1■■□□□ 1.77
APOE-204ENST00000446996 NOM1Q5C9Z4 860 aaKnown RBP26.1■■□□□ 1.77
APOE-204ENST00000446996 KANSL2Q9H9L4 492 aa26.1■■□□□ 1.77
APOE-204ENST00000446996 FOXN1O15353 648 aa26.09■■□□□ 1.77
APOE-204ENST00000446996 USP14P54578 494 aa26.09■■□□□ 1.77
APOE-204ENST00000446996 CTDSPL2Q05D32 466 aa26.09■■□□□ 1.77
APOE-204ENST00000446996 LOC285556D6RIA3 1793 aa26.08■■□□□ 1.77
APOE-204ENST00000446996 IMMTQ16891 758 aaKnown RBP26.08■■□□□ 1.77
APOE-204ENST00000446996 GPAT2Q6NUI2 795 aa26.08■■□□□ 1.77
APOE-204ENST00000446996 USP17L2Q6R6M4 530 aa26.08■■□□□ 1.77
APOE-204ENST00000446996 FAM43AQ8N2R8 423 aa26.08■■□□□ 1.77
APOE-204ENST00000446996 C12orf42Q96LP6 360 aa26.08■■□□□ 1.77
APOE-204ENST00000446996 KIAA1683Q9H0B3 1180 aa26.08■■□□□ 1.77
APOE-204ENST00000446996 RNF41Q9H4P4 317 aaPredicted RBP26.08■■□□□ 1.77
APOE-204ENST00000446996 PLIN4Q96Q06 1357 aa26.07■■□□□ 1.76
APOE-204ENST00000446996 AKNAD1Q5T1N1 836 aa26.07■■□□□ 1.76
APOE-204ENST00000446996 KIAA1211Q6ZU35 1233 aa26.07■■□□□ 1.76
APOE-204ENST00000446996 NEDD1Q8NHV4 660 aa26.07■■□□□ 1.76
APOE-204ENST00000446996 STAG1Q8WVM7 1258 aa26.07■■□□□ 1.76
APOE-204ENST00000446996 MAP4K1Q92918 833 aa26.07■■□□□ 1.76
APOE-204ENST00000446996 TMOD4Q9NZQ9 345 aa26.07■■□□□ 1.76
APOE-204ENST00000446996 AGTPBP1Q9UPW5 1226 aa26.07■■□□□ 1.76
APOE-204ENST00000446996 U3KPZ7 1027 aaPredicted RBP26.07■■□□□ 1.76
APOE-204ENST00000446996 PRDM1O75626 825 aa26.06■■□□□ 1.76
APOE-204ENST00000446996 HSPA8P11142 646 aaKnown RBP26.06■■□□□ 1.76
APOE-204ENST00000446996 HMGCS2P54868 508 aa26.06■■□□□ 1.76
APOE-204ENST00000446996 PABPC4Q13310 644 aaKnown RBP eCLIP26.06■■□□□ 1.761e-6■■■■■ 43.8
APOE-204ENST00000446996 MTMR2Q13614 643 aa26.06■■□□□ 1.76
APOE-204ENST00000446996 PPP4R3BQ5MIZ7 849 aa26.06■■□□□ 1.76
APOE-204ENST00000446996 STK11IPQ8N1F8 1099 aa26.06■■□□□ 1.76
APOE-204ENST00000446996 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.06■■□□□ 1.76
APOE-204ENST00000446996 SH2D4AQ9H788 454 aa26.06■■□□□ 1.76
APOE-204ENST00000446996 ARHGEF10LQ9HCE6 1279 aa26.06■■□□□ 1.76
APOE-204ENST00000446996 IGKV6D-41A0A0C4DH26 115 aa26.05■■□□□ 1.76
APOE-204ENST00000446996 PTH1RQ03431 593 aa26.05■■□□□ 1.76
APOE-204ENST00000446996 ICA1Q05084 483 aa26.05■■□□□ 1.76
APOE-204ENST00000446996 GADL1Q6ZQY3 521 aa26.05■■□□□ 1.76
APOE-204ENST00000446996 MFSD6Q6ZSS7 791 aa26.05■■□□□ 1.76
APOE-204ENST00000446996 ZFYVE28Q9HCC9 887 aa26.05■■□□□ 1.76
APOE-204ENST00000446996 NYAP2Q9P242 653 aa26.05■■□□□ 1.76
APOE-204ENST00000446996 PDHXO00330 501 aa26.04■■□□□ 1.76
APOE-204ENST00000446996 TSPY3P0CV98 308 aa26.04■■□□□ 1.76
APOE-204ENST00000446996 TSPY8P0CW00 308 aa26.04■■□□□ 1.76
APOE-204ENST00000446996 TAF1CQ15572 869 aaPredicted RBP26.04■■□□□ 1.76
APOE-204ENST00000446996 SIAH1Q8IUQ4 282 aa26.04■■□□□ 1.76
APOE-204ENST00000446996 ACER1Q8TDN7 264 aa26.04■■□□□ 1.76
APOE-204ENST00000446996 SYNPO2Q9UMS6 1093 aa26.04■■□□□ 1.76
APOE-204ENST00000446996 TMX2Q9Y320 296 aa26.04■■□□□ 1.76
APOE-204ENST00000446996 TACC3Q9Y6A5 838 aa26.04■■□□□ 1.76
APOE-204ENST00000446996 HOXA7P31268 230 aaPredicted RBP26.03■■□□□ 1.76
APOE-204ENST00000446996 HAND2P61296 217 aa26.03■■□□□ 1.76
APOE-204ENST00000446996 TFAP4Q01664 338 aa26.03■■□□□ 1.76
APOE-204ENST00000446996 FEZ1Q99689 392 aa26.03■■□□□ 1.76
APOE-204ENST00000446996 LSG1Q9H089 658 aaKnown RBP26.03■■□□□ 1.76
APOE-204ENST00000446996 NBPF3Q9H094 633 aa26.03■■□□□ 1.76
APOE-204ENST00000446996 PRDM10Q9NQV6 1147 aa26.03■■□□□ 1.76
APOE-204ENST00000446996 EMILIN3Q9NT22 766 aa26.03■■□□□ 1.76
APOE-204ENST00000446996 A0A1W2PRG0 241 aa26.02■■□□□ 1.76
APOE-204ENST00000446996 MKL1Q969V6 931 aa26.02■■□□□ 1.76
APOE-204ENST00000446996 TCP11L1Q9NUJ3 509 aa26.02■■□□□ 1.76
APOE-204ENST00000446996 PNMA3Q9UL41 463 aa26.02■■□□□ 1.76
APOE-204ENST00000446996 TSPY2A6NKD2 308 aa26.01■■□□□ 1.75
APOE-204ENST00000446996 TBC1D8O95759 1140 aa26.01■■□□□ 1.75
APOE-204ENST00000446996 EEF2P13639 858 aaKnown RBP26.01■■□□□ 1.75
APOE-204ENST00000446996 CRHR2Q13324 411 aa26.01■■□□□ 1.75
APOE-204ENST00000446996 TBC1D10CQ8IV04 446 aa26.01■■□□□ 1.75
APOE-204ENST00000446996 PARK7Q99497 189 aaKnown RBP26.01■■□□□ 1.75
APOE-204ENST00000446996 MTMR4Q9NYA4 1195 aa26.01■■□□□ 1.75
APOE-204ENST00000446996 RANBP6O60518 1105 aaKnown RBP26■■□□□ 1.75
APOE-204ENST00000446996 TLR2O60603 784 aa26■■□□□ 1.75
APOE-204ENST00000446996 FAM47AQ5JRC9 791 aa26■■□□□ 1.75
APOE-204ENST00000446996 TNS4Q8IZW8 715 aa26■■□□□ 1.75
APOE-204ENST00000446996 LPAR1Q92633 364 aa26■■□□□ 1.75
APOE-204ENST00000446996 CNNM2Q9H8M5 875 aa26■■□□□ 1.75
APOE-204ENST00000446996 INCENPQ9NQS7 918 aa26■■□□□ 1.75
APOE-204ENST00000446996 MYH4Q9Y623 1939 aa26■■□□□ 1.75
APOE-204ENST00000446996 GPR25O00155 361 aa25.99■■□□□ 1.75
APOE-204ENST00000446996 TTLL1O95922 423 aa25.99■■□□□ 1.75
APOE-204ENST00000446996 OSBPP22059 807 aa25.99■■□□□ 1.75
APOE-204ENST00000446996 NOVP48745 357 aa25.99■■□□□ 1.75
APOE-204ENST00000446996 LBX1P52954 281 aa25.99■■□□□ 1.75
APOE-204ENST00000446996 TREML2Q5T2D2 321 aa25.99■■□□□ 1.75
APOE-204ENST00000446996 ESR2Q92731 530 aa25.99■■□□□ 1.75
APOE-204ENST00000446996 VCPKMTQ9H867 229 aa25.99■■□□□ 1.75
APOE-204ENST00000446996 TOMM22Q9NS69 142 aa25.99■■□□□ 1.75
APOE-204ENST00000446996 RBM8AQ9Y5S9 174 aaKnown RBP25.99■■□□□ 1.75
APOE-204ENST00000446996 CYP21A2P08686 494 aa25.98■■□□□ 1.75
APOE-204ENST00000446996 CEP95Q96GE4 821 aa25.98■■□□□ 1.75
APOE-204ENST00000446996 KRT23Q9C075 422 aa25.98■■□□□ 1.75
APOE-204ENST00000446996 ANO2Q9NQ90 1003 aa25.98■■□□□ 1.75
APOE-204ENST00000446996 EPB41L2O43491 1005 aaKnown RBP25.97■■□□□ 1.75
APOE-204ENST00000446996 CCDC178Q5BJE1 867 aa25.97■■□□□ 1.75
APOE-204ENST00000446996 CLEC10AQ8IUN9 316 aa25.97■■□□□ 1.75
APOE-204ENST00000446996 R3HDMLQ9H3Y0 253 aa25.97■■□□□ 1.75
APOE-204ENST00000446996 GOPCQ9HD26 462 aa25.97■■□□□ 1.75
APOE-204ENST00000446996 TSKSQ9UJT2 592 aa25.97■■□□□ 1.75
APOE-204ENST00000446996 ADGRA2Q96PE1 1338 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 USP17L15C9J2P7 530 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 USP17L13C9JLJ4 530 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms