RNA–Protein interactions for RNA: ENST00000445998.1

UBQLN3-202, Transcript of ubiquilin 3, humanhuman

TSL 3

Gene UBQLN3, Length 817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-202ENST00000445998 ALDH1A1P00352 501 aa16.27■□□□□ 0.2
UBQLN3-202ENST00000445998 CYP21A2P08686 494 aa16.27■□□□□ 0.2
UBQLN3-202ENST00000445998 ZKSCAN1P17029 563 aaPredicted RBP16.27■□□□□ 0.2
UBQLN3-202ENST00000445998 BACE1P56817 501 aa16.27■□□□□ 0.2
UBQLN3-202ENST00000445998 RRP12Q5JTH9 1297 aaKnown RBP16.27■□□□□ 0.2
UBQLN3-202ENST00000445998 MS4A4AQ96JQ5 239 aa16.27■□□□□ 0.2
UBQLN3-202ENST00000445998 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.2
UBQLN3-202ENST00000445998 NYAP2Q9P242 653 aa16.27■□□□□ 0.2
UBQLN3-202ENST00000445998 GREB1LQ9C091 1923 aaPredicted RBP16.27■□□□□ 0.19
UBQLN3-202ENST00000445998 MYH4Q9Y623 1939 aa16.27■□□□□ 0.19
UBQLN3-202ENST00000445998 CCL15-CCL14A0A0B4J2E2 113 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 A0A0G2JLL6 359 aaPredicted RBP16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 TRIM75PA6NK02 468 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 MCCP23508 829 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 JAG1P78504 1218 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 ICA1Q05084 483 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 CCL15Q16663 113 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 SH3D19Q5HYK7 790 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 PRRT2Q7Z6L0 340 aaPredicted RBP16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 IQCA1Q86XH1 822 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 JMYQ8N9B5 988 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 NCOA7Q8NI08 942 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 FEZ1Q99689 392 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 TCP11L1Q9NUJ3 509 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 SYNPO2Q9UMS6 1093 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 THSD7BQ9C0I4 1608 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 PLIN4Q96Q06 1357 aa16.26■□□□□ 0.19
UBQLN3-202ENST00000445998 SLC27A2O14975 620 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 TTLL1O95922 423 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 PABPC4Q13310 644 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 KRT32Q14532 448 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 FAM47AQ5JRC9 791 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 CREB3L3Q68CJ9 461 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 RALYLQ86SE5 291 aaKnown RBP16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 TBC1D10CQ8IV04 446 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 TTC14Q96N46 770 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 NBPF3Q9H094 633 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 KIAA1683Q9H0B3 1180 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 MTMR4Q9NYA4 1195 aa16.25■□□□□ 0.19
UBQLN3-202ENST00000445998 E7EWF7 191 aa16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 CA12O43570 354 aa16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 TSGA10IPQ3SY00 556 aa16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 GADL1Q6ZQY3 521 aa16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 IFNL1Q8IU54 200 aa16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 MKL1Q969V6 931 aa16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 GOPCQ9HD26 462 aa16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 SLC45A1Q9Y2W3 748 aa16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 TMX2Q9Y320 296 aa16.24■□□□□ 0.19
UBQLN3-202ENST00000445998 IGKV6D-41A0A0C4DH26 115 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 B4E1Z4 1266 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 EEF2P13639 858 aaKnown RBP16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 ATP2B2Q01814 1243 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 MTMR2Q13614 643 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 SHROOM1Q2M3G4 852 aaPredicted RBP16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 ANKRD23Q86SG2 305 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 CCDC84Q86UT8 332 aaPredicted RBP16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 LPAR1Q92633 364 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 CEP95Q96GE4 821 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 USP26Q9BXU7 913 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 ZSWIM5Q9P217 1185 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 CLIP2Q9UDT6 1046 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 TACC3Q9Y6A5 838 aa16.23■□□□□ 0.19
UBQLN3-202ENST00000445998 KDM4AO75164 1064 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 HSPA4P34932 840 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 HMGCS2P54868 508 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 SART3Q15020 963 aaKnown RBP16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 DGKHQ86XP1 1220 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 C12orf42Q96LP6 360 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 ZIC5Q96T25 663 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 MTA3Q9BTC8 594 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 SAGE1Q9NXZ1 904 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 AGTPBP1Q9UPW5 1226 aa16.22■□□□□ 0.19
UBQLN3-202ENST00000445998 NEDD4P46934 1319 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 LOC285556D6RIA3 1793 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 ERICH2A1L162 156 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 HMGB1P09429 215 aaKnown RBP16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 SIAH1Q8IUQ4 282 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 ACER1Q8TDN7 264 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 KCNB2Q92953 911 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 VCPKMTQ9H867 229 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 WBP1LQ9NX94 342 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 PNMA3Q9UL41 463 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 STX8Q9UNK0 236 aa16.21■□□□□ 0.19
UBQLN3-202ENST00000445998 A0A1W2PRG0 241 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 BTBD19C9JJ37 291 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 OSBPP22059 807 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 PSMA5P28066 241 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 HOXA7P31268 230 aaPredicted RBP16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 MCM5P33992 734 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 NOVP48745 357 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 ZSCAN10Q96SZ4 725 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms