RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 UQCRFS1P1P0C7P4 283 aa18.16■□□□□ 0.5
UBE2F-216ENST00000445676 PTPREP23469 700 aa18.16■□□□□ 0.5
UBE2F-216ENST00000445676 ZYXQ15942 572 aaKnown RBP18.16■□□□□ 0.5
UBE2F-216ENST00000445676 CDX2Q99626 313 aaPredicted RBP18.16■□□□□ 0.5
UBE2F-216ENST00000445676 MUC3AQ02505 3323 aa18.16■□□□□ 0.5
UBE2F-216ENST00000445676 MSCO60682 206 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 IGHA2P01877 340 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 GNAI3P08754 354 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 HOXC6P09630 235 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 CNGA1P29973 690 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 CCNA1P78396 465 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 GRB14Q14449 540 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 SHHQ15465 462 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 C9orf50Q5SZB4 431 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 WDR78Q5VTH9 848 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
UBE2F-216ENST00000445676 MAFAQ8NHW3 353 aaPredicted RBP18.15■□□□□ 0.5
UBE2F-216ENST00000445676 BTBD7Q9P203 1132 aa18.15■□□□□ 0.5
UBE2F-216ENST00000445676 USP17L15C9J2P7 530 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 USP17L13C9JLJ4 530 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 USP17L11C9JVI0 530 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 USP17L18D6R9N7 530 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 USP17L22D6RA61 530 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 USP17L17D6RBQ6 530 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 USP17L19D6RCP7 530 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 USP17L20D6RJB6 530 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 GLRX3O76003 335 aaKnown RBP18.14■□□□□ 0.49
UBE2F-216ENST00000445676 HLA-DOAP06340 250 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 CYBAP13498 195 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 CYP2C19P33261 490 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 USP17L24Q0WX57 530 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 CATSPERGQ6ZRH7 1159 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 FEZ1Q99689 392 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 PRKAG2Q9UGJ0 569 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 ATP11BQ9Y2G3 1177 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 NAV1Q8NEY1 1877 aa18.14■□□□□ 0.49
UBE2F-216ENST00000445676 PNMA6EA0A0J9YXQ4 647 aa18.13■□□□□ 0.49
UBE2F-216ENST00000445676 CYP2E1P05181 493 aaPredicted RBP18.13■□□□□ 0.49
UBE2F-216ENST00000445676 VCAM1P19320 739 aa18.13■□□□□ 0.49
UBE2F-216ENST00000445676 DYNLL1P63167 89 aaKnown RBP18.13■□□□□ 0.49
UBE2F-216ENST00000445676 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
UBE2F-216ENST00000445676 TTYH1Q9H313 450 aaPredicted RBP18.13■□□□□ 0.49
UBE2F-216ENST00000445676 SEMA6BQ9H3T3 888 aa18.13■□□□□ 0.49
UBE2F-216ENST00000445676 PARP14Q460N5 1801 aa18.13■□□□□ 0.49
UBE2F-216ENST00000445676 MYH8P13535 1937 aa18.12■□□□□ 0.49
UBE2F-216ENST00000445676 SPDYE16A6NNV3 312 aaPredicted RBP18.12■□□□□ 0.49
UBE2F-216ENST00000445676 CT47B1P0C2W7 299 aaPredicted RBP18.12■□□□□ 0.49
UBE2F-216ENST00000445676 TTC39AQ5SRH9 613 aa18.12■□□□□ 0.49
UBE2F-216ENST00000445676 GJC2Q5T442 439 aaPredicted RBP18.12■□□□□ 0.49
UBE2F-216ENST00000445676 LBX2Q6XYB7 198 aa18.12■□□□□ 0.49
UBE2F-216ENST00000445676 ACER1Q8TDN7 264 aa18.12■□□□□ 0.49
UBE2F-216ENST00000445676 MYLIPQ8WY64 445 aa18.12■□□□□ 0.49
UBE2F-216ENST00000445676 DBNDD2Q9BQY9 259 aa18.12■□□□□ 0.49
UBE2F-216ENST00000445676 IVNS1ABPQ9Y6Y0 642 aa18.12■□□□□ 0.49
UBE2F-216ENST00000445676 NCOR1O75376 2440 aa18.12■□□□□ 0.49
UBE2F-216ENST00000445676 G3BP1Q13283 466 aaKnown RBP eCLIP18.11■□□□□ 0.49
UBE2F-216ENST00000445676 TATDN1Q6P1N9 297 aa18.11■□□□□ 0.49
UBE2F-216ENST00000445676 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
UBE2F-216ENST00000445676 KIAA1683Q9H0B3 1180 aa18.11■□□□□ 0.49
UBE2F-216ENST00000445676 PIH1D3Q9NQM4 214 aaKnown RBP18.11■□□□□ 0.49
UBE2F-216ENST00000445676 PLXNA1Q9UIW2 1896 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 COL11A1P12107 1806 aaPredicted RBP18.1■□□□□ 0.49
UBE2F-216ENST00000445676 USP14P54578 494 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 SNX17Q15036 470 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 RAB3GAP1Q15042 981 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 TRIM60Q495X7 471 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 ANO1Q5XXA6 986 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 SLC39A5Q6ZMH5 540 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 BADQ92934 168 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 PRDM6Q9NQX0 595 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 PRDM5Q9NQX1 630 aaPredicted RBP18.1■□□□□ 0.49
UBE2F-216ENST00000445676 PDLIM7Q9NR12 457 aa18.1■□□□□ 0.49
UBE2F-216ENST00000445676 ZAP70P43403 619 aa18.09■□□□□ 0.49
UBE2F-216ENST00000445676 RARSP54136 660 aaKnown RBP18.09■□□□□ 0.49
UBE2F-216ENST00000445676 SMAD3P84022 425 aaKnown RBP18.09■□□□□ 0.49
UBE2F-216ENST00000445676 TNNI3KQ59H18 835 aa18.09■□□□□ 0.49
UBE2F-216ENST00000445676 SH3RF1Q7Z6J0 888 aa18.09■□□□□ 0.49
UBE2F-216ENST00000445676 RPAP3Q9H6T3 665 aaPredicted RBP18.09■□□□□ 0.49
UBE2F-216ENST00000445676 FPGT-TNNI3KV9GXZ4 949 aa18.09■□□□□ 0.49
UBE2F-216ENST00000445676 KBTBD13C9JR72 458 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 GNAI2P04899 355 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 CYP7A1P22680 504 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 ADORA2AP29274 412 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 OLFML2BQ68BL8 750 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 ARRDC4Q8NCT1 418 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 ARHGAP45Q92619 1136 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 EHD4Q9H223 541 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 GPR108Q9NPR9 543 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 SERPINB13Q9UIV8 391 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 TNNQ9UQP3 1299 aa18.08■□□□□ 0.48
UBE2F-216ENST00000445676 TRIM43BA6NCK2 446 aa18.07■□□□□ 0.48
UBE2F-216ENST00000445676 GUCY1A2P33402 732 aa18.07■□□□□ 0.48
UBE2F-216ENST00000445676 ABCB5Q2M3G0 1257 aa18.07■□□□□ 0.48
UBE2F-216ENST00000445676 CERKLQ49MI3 558 aaPredicted RBP18.07■□□□□ 0.48
UBE2F-216ENST00000445676 CCDC158Q5M9N0 1113 aa18.07■□□□□ 0.48
UBE2F-216ENST00000445676 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
UBE2F-216ENST00000445676 TRIM43Q96BQ3 446 aaPredicted RBP18.07■□□□□ 0.48
UBE2F-216ENST00000445676 MOV10L1Q9BXT6 1211 aaKnown RBP18.07■□□□□ 0.48
UBE2F-216ENST00000445676 SEPT4O43236 478 aa18.06■□□□□ 0.48
UBE2F-216ENST00000445676 IGSF3O75054 1194 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms