RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 BCL9LQ86UU0 1499 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 POTEB2H3BUK9 544 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 TDO2P48775 406 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 CORO7P57737 925 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 CHMP4BP1P59074 171 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 PTPAQ15257 358 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 SRGAP1Q7Z6B7 1085 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 STAG1Q8WVM7 1258 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 NACAP1Q9BZK3 213 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 THRAP3Q9Y2W1 955 aaKnown RBP21.52■■□□□ 1.04
PMPCB-204ENST00000444457 SLC4A4Q9Y6R1 1079 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 TOM1O60784 492 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 CHRNDQ07001 517 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 TOGARAM2Q6ZUX3 1019 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 JMYQ8N9B5 988 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 MSANTD4Q8NCY6 345 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 PPM1EQ8WY54 764 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 SLC26A6Q9BXS9 759 aa21.52■■□□□ 1.04
PMPCB-204ENST00000444457 COL4A1P02462 1669 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 SSRP1Q08945 709 aaKnown RBP21.51■■□□□ 1.03
PMPCB-204ENST00000444457 MCM6Q14566 821 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 MAP3K14Q99558 947 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 NCAPGQ9BPX3 1015 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 INTS13Q9NVM9 706 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 A0A1B0GUL6 1792 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 UBE2Q2LH0YL09 131 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 CUTAO60888 179 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 FMNL1O95466 1100 aaPredicted RBP21.51■■□□□ 1.03
PMPCB-204ENST00000444457 MARCH10Q8NA82 808 aaPredicted RBP21.51■■□□□ 1.03
PMPCB-204ENST00000444457 L1RE1Q9UN81 338 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 HPSEQ9Y251 543 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 FAN1Q9Y2M0 1017 aa21.51■■□□□ 1.03
PMPCB-204ENST00000444457 IFNAR1P17181 557 aa21.5■■□□□ 1.03
PMPCB-204ENST00000444457 SYKP43405 635 aa21.5■■□□□ 1.03
PMPCB-204ENST00000444457 RRP12Q5JTH9 1297 aaKnown RBP21.5■■□□□ 1.03
PMPCB-204ENST00000444457 CCDC12Q8WUD4 166 aaPredicted RBP21.5■■□□□ 1.03
PMPCB-204ENST00000444457 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.5■■□□□ 1.03
PMPCB-204ENST00000444457 ERLIN1O75477 346 aa21.5■■□□□ 1.03
PMPCB-204ENST00000444457 ATP2B1P20020 1258 aa21.5■■□□□ 1.03
PMPCB-204ENST00000444457 ISM2Q6H9L7 571 aa21.5■■□□□ 1.03
PMPCB-204ENST00000444457 LRP2BPQ9P2M1 347 aa21.5■■□□□ 1.03
PMPCB-204ENST00000444457 SHC4Q6S5L8 630 aa21.49■■□□□ 1.03
PMPCB-204ENST00000444457 TC2NQ8N9U0 490 aa21.49■■□□□ 1.03
PMPCB-204ENST00000444457 MIGA1Q8NAN2 632 aa21.49■■□□□ 1.03
PMPCB-204ENST00000444457 MYCBPQ99417 103 aaPredicted RBP21.49■■□□□ 1.03
PMPCB-204ENST00000444457 TOMM22Q9NS69 142 aa21.49■■□□□ 1.03
PMPCB-204ENST00000444457 CASZ1Q86V15 1759 aa21.49■■□□□ 1.03
PMPCB-204ENST00000444457 N4BP1O75113 896 aaKnown RBP21.48■■□□□ 1.03
PMPCB-204ENST00000444457 CPP00450 1065 aa21.48■■□□□ 1.03
PMPCB-204ENST00000444457 SART3Q15020 963 aaKnown RBP21.48■■□□□ 1.03
PMPCB-204ENST00000444457 WASF1Q92558 559 aa21.48■■□□□ 1.03
PMPCB-204ENST00000444457 COL5A3P25940 1745 aaPredicted RBP21.48■■□□□ 1.03
PMPCB-204ENST00000444457 FAM237AA0A1B0GTK4 181 aa21.48■■□□□ 1.03
PMPCB-204ENST00000444457 ADAMTS2O95450 1211 aa21.48■■□□□ 1.03
PMPCB-204ENST00000444457 WTAPQ15007 396 aa21.48■■□□□ 1.03
PMPCB-204ENST00000444457 PNKPQ96T60 521 aa21.48■■□□□ 1.03
PMPCB-204ENST00000444457 ZKSCAN3Q9BRR0 538 aa21.48■■□□□ 1.03
PMPCB-204ENST00000444457 PTPN21Q16825 1174 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 LRRC31Q6UY01 552 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 CEP112Q8N8E3 955 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 FAM71BQ8TC56 605 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 MTA3Q9BTC8 594 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.47■■□□□ 1.03
PMPCB-204ENST00000444457 TUBB4BP68371 445 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 RTN1Q16799 776 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 RESP18Q5W5W9 173 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 CDC5LQ99459 802 aaKnown RBP21.47■■□□□ 1.03
PMPCB-204ENST00000444457 FANCLQ9NW38 375 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 MYH6P13533 1939 aa21.47■■□□□ 1.03
PMPCB-204ENST00000444457 GUCY1A2P33402 732 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 SUGP1Q8IWZ8 645 aaKnown RBP21.46■■□□□ 1.03
PMPCB-204ENST00000444457 RNF41Q9H4P4 317 aaPredicted RBP21.46■■□□□ 1.03
PMPCB-204ENST00000444457 IQSEC3Q9UPP2 1182 aaPredicted RBP21.46■■□□□ 1.03
PMPCB-204ENST00000444457 TAF1P21675 1872 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 ZNF804BA4D1E1 1349 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 ERICH2A1L162 156 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 CYP7A1P22680 504 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 MMP14P50281 582 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 ADGRA1Q86SQ6 560 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 NOSTRINQ8IVI9 506 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 CLIC6Q96NY7 704 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 ZSWIM4Q9H7M6 989 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 ABCB6Q9NP58 842 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 ZNF652Q9Y2D9 606 aa21.46■■□□□ 1.03
PMPCB-204ENST00000444457 MMP1P03956 469 aa21.45■■□□□ 1.02
PMPCB-204ENST00000444457 PPARAQ07869 468 aa21.45■■□□□ 1.02
PMPCB-204ENST00000444457 TRIM22Q8IYM9 498 aa21.45■■□□□ 1.02
PMPCB-204ENST00000444457 STK11IPQ8N1F8 1099 aa21.45■■□□□ 1.02
PMPCB-204ENST00000444457 MRPL44Q9H9J2 332 aaKnown RBP21.45■■□□□ 1.02
PMPCB-204ENST00000444457 CDC23Q9UJX2 597 aa21.45■■□□□ 1.02
PMPCB-204ENST00000444457 LOC102724159A0A0B4J2E5 919 aa21.45■■□□□ 1.02
PMPCB-204ENST00000444457 CACNA1SQ13698 1873 aa21.45■■□□□ 1.02
PMPCB-204ENST00000444457 KARSQ15046 597 aaKnown RBP21.45■■□□□ 1.02
PMPCB-204ENST00000444457 PWP2Q15269 919 aaKnown RBP21.45■■□□□ 1.02
PMPCB-204ENST00000444457 TMTC2Q8N394 836 aa21.45■■□□□ 1.02
PMPCB-204ENST00000444457 SPECC1LQ69YQ0 1117 aa21.44■■□□□ 1.02
PMPCB-204ENST00000444457 EFCAB13Q8IY85 973 aa21.44■■□□□ 1.02
PMPCB-204ENST00000444457 PDILTQ8N807 584 aa21.44■■□□□ 1.02
PMPCB-204ENST00000444457 DRC1Q96MC2 740 aa21.44■■□□□ 1.02
PMPCB-204ENST00000444457 DESI2Q9BSY9 194 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms