RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 WDR18Q9BV38 432 aa21.16■□□□□ 0.98
CIRBP-203ENST00000444172 USP26Q9BXU7 913 aa21.16■□□□□ 0.98
CIRBP-203ENST00000444172 KANSL2Q9H9L4 492 aa21.16■□□□□ 0.98
CIRBP-203ENST00000444172 MANSC4A6NHS7 340 aaPredicted RBP21.15■□□□□ 0.98
CIRBP-203ENST00000444172 USP17L10C9JJH3 530 aa21.15■□□□□ 0.98
CIRBP-203ENST00000444172 SEC24BO95487 1268 aa21.15■□□□□ 0.98
CIRBP-203ENST00000444172 ZKSCAN1P17029 563 aaPredicted RBP21.15■□□□□ 0.98
CIRBP-203ENST00000444172 MAP2K2P36507 400 aa21.15■□□□□ 0.98
CIRBP-203ENST00000444172 ZYXQ15942 572 aaKnown RBP21.15■□□□□ 0.98
CIRBP-203ENST00000444172 RALYLQ86SE5 291 aaKnown RBP21.15■□□□□ 0.98
CIRBP-203ENST00000444172 NCOA7Q8NI08 942 aa21.15■□□□□ 0.98
CIRBP-203ENST00000444172 ACER1Q8TDN7 264 aa21.15■□□□□ 0.98
CIRBP-203ENST00000444172 FEZ1Q99689 392 aa21.15■□□□□ 0.98
CIRBP-203ENST00000444172 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.15■□□□□ 0.98
CIRBP-203ENST00000444172 ARHGEF10LQ9HCE6 1279 aa21.15■□□□□ 0.98
CIRBP-203ENST00000444172 KCNH4Q9UQ05 1017 aa21.15■□□□□ 0.98
CIRBP-203ENST00000444172 CCL15-CCL14A0A0B4J2E2 113 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 NMT2O60551 498 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 CETPP11597 493 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 EEF2P13639 858 aaKnown RBP21.14■□□□□ 0.97
CIRBP-203ENST00000444172 MCCP23508 829 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 HSPA4P34932 840 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 MTMR2Q13614 643 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 CCL15Q16663 113 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 GADL1Q6ZQY3 521 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 STOX1Q6ZVD7 989 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 NKX2-3Q8TAU0 364 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 CEP95Q96GE4 821 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 MS4A4AQ96JQ5 239 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 ZKSCAN3Q9BRR0 538 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 CLIP2Q9UDT6 1046 aa21.14■□□□□ 0.97
CIRBP-203ENST00000444172 EPB41L2O43491 1005 aaKnown RBP21.13■□□□□ 0.97
CIRBP-203ENST00000444172 HMGCS2P54868 508 aa21.13■□□□□ 0.97
CIRBP-203ENST00000444172 BACE1P56817 501 aa21.13■□□□□ 0.97
CIRBP-203ENST00000444172 SREBF2Q12772 1141 aa21.13■□□□□ 0.97
CIRBP-203ENST00000444172 ZSWIM5Q9P217 1185 aa21.13■□□□□ 0.97
CIRBP-203ENST00000444172 GREB1LQ9C091 1923 aaPredicted RBP21.13■□□□□ 0.97
CIRBP-203ENST00000444172 IGKV6D-41A0A0C4DH26 115 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 A0A1W2PRG0 241 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 C19orf81C9J6K1 198 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 RAD21O60216 631 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 INHBEP58166 350 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 DGKZQ13574 1117 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 SIAH1Q8IUQ4 282 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 RASEFQ8IZ41 740 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 IL17RBQ9NRM6 502 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 MTMR4Q9NYA4 1195 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 TMOD4Q9NZQ9 345 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 STX8Q9UNK0 236 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 MYH4Q9Y623 1939 aa21.12■□□□□ 0.97
CIRBP-203ENST00000444172 PLIN4Q96Q06 1357 aa21.11■□□□□ 0.97
CIRBP-203ENST00000444172 A0A0G2JLL6 359 aaPredicted RBP21.11■□□□□ 0.97
CIRBP-203ENST00000444172 TTLL1O95922 423 aa21.11■□□□□ 0.97
CIRBP-203ENST00000444172 NT5C2P49902 561 aa21.11■□□□□ 0.97
CIRBP-203ENST00000444172 USP17L2Q6R6M4 530 aa21.11■□□□□ 0.97
CIRBP-203ENST00000444172 FASTKD5Q7L8L6 764 aaKnown RBP21.11■□□□□ 0.97
CIRBP-203ENST00000444172 PRRT2Q7Z6L0 340 aaPredicted RBP21.11■□□□□ 0.97
CIRBP-203ENST00000444172 IQCA1Q86XH1 822 aa21.11■□□□□ 0.97
CIRBP-203ENST00000444172 REM2Q8IYK8 340 aaPredicted RBP21.11■□□□□ 0.97
CIRBP-203ENST00000444172 BRI3BPQ8WY22 251 aa21.11■□□□□ 0.97
CIRBP-203ENST00000444172 NYAP2Q9P242 653 aa21.11■□□□□ 0.97
CIRBP-203ENST00000444172 PTPRFP10586 1907 aa21.11■□□□□ 0.97
CIRBP-203ENST00000444172 TM4SF4P48230 202 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 USP14P54578 494 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 KRT32Q14532 448 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 TSGA10IPQ3SY00 556 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 PPP4R3BQ5MIZ7 849 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 CYB5R4Q7L1T6 521 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 CHST3Q7LGC8 479 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 SH2D4AQ9H788 454 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 TCP11L1Q9NUJ3 509 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 SNX14Q9Y5W7 946 aa21.1■□□□□ 0.97
CIRBP-203ENST00000444172 TESPA1A2RU30 521 aaPredicted RBP21.09■□□□□ 0.97
CIRBP-203ENST00000444172 SH3D19Q5HYK7 790 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 OTUD7BQ6GQQ9 843 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 IFNL1Q8IU54 200 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 KCNB2Q92953 911 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 NEK1Q96PY6 1258 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 PTPN18Q99952 460 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 UBAC1Q9BSL1 405 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 KIAA1683Q9H0B3 1180 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 EMILIN3Q9NT22 766 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 TMX2Q9Y320 296 aa21.09■□□□□ 0.97
CIRBP-203ENST00000444172 BTBD19C9JJ37 291 aa21.08■□□□□ 0.97
CIRBP-203ENST00000444172 ADCK5Q3MIX3 580 aa21.08■□□□□ 0.97
CIRBP-203ENST00000444172 CCDC178Q5BJE1 867 aa21.08■□□□□ 0.97
CIRBP-203ENST00000444172 ZSCAN10Q96SZ4 725 aaPredicted RBP21.08■□□□□ 0.97
CIRBP-203ENST00000444172 IGF2BP3O00425 579 aaKnown RBP eCLIP21.07■□□□□ 0.96
CIRBP-203ENST00000444172 MAP2K1Q02750 393 aaPredicted RBP21.07■□□□□ 0.96
CIRBP-203ENST00000444172 MOGSQ13724 837 aa21.07■□□□□ 0.96
CIRBP-203ENST00000444172 MB21D2Q8IYB1 491 aaPredicted RBP21.07■□□□□ 0.96
CIRBP-203ENST00000444172 SPICE1Q8N0Z3 855 aa21.07■□□□□ 0.96
CIRBP-203ENST00000444172 LRRC47Q8N1G4 583 aaKnown RBP21.07■□□□□ 0.96
CIRBP-203ENST00000444172 PROCA1Q8NCQ7 364 aaPredicted RBP21.07■□□□□ 0.96
CIRBP-203ENST00000444172 MKL1Q969V6 931 aa21.07■□□□□ 0.96
CIRBP-203ENST00000444172 CHMP4CQ96CF2 233 aa21.07■□□□□ 0.96
CIRBP-203ENST00000444172 JAKMIP1Q96N16 626 aaKnown RBP21.07■□□□□ 0.96
CIRBP-203ENST00000444172 GOPCQ9HD26 462 aa21.07■□□□□ 0.96
CIRBP-203ENST00000444172 TNKSO95271 1327 aa21.06■□□□□ 0.96
CIRBP-203ENST00000444172 ERICH2A1L162 156 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms