RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 MTMR2Q13614 643 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 MOGSQ13724 837 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 SEPT2Q15019 361 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 USP17L2Q6R6M4 530 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 FAM43AQ8N2R8 423 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 ARHGEF10LQ9HCE6 1279 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 PNMA3Q9UL41 463 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 AGTPBP1Q9UPW5 1226 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 GREB1LQ9C091 1923 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-211ENST00000443563 ZNF213O14771 459 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 RASA1P20936 1047 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 HMGCS2P54868 508 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 ICA1Q05084 483 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 CRHR2Q13324 411 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 IMMTQ16891 758 aaKnown RBP12.86□□□□□ -0.35
HDAC6-211ENST00000443563 SHROOM1Q2M3G4 852 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-211ENST00000443563 PPP4R3BQ5MIZ7 849 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 GPAT2Q6NUI2 795 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 STK11IPQ8N1F8 1099 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 PARK7Q99497 189 aaKnown RBP12.86□□□□□ -0.35
HDAC6-211ENST00000443563 KIAA1683Q9H0B3 1180 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 RNF41Q9H4P4 317 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-211ENST00000443563 TSKSQ9UJT2 592 aa12.86□□□□□ -0.35
HDAC6-211ENST00000443563 SMIM22K7EJ46 135 aa12.85□□□□□ -0.35
HDAC6-211ENST00000443563 SGSM2O43147 1006 aa12.85□□□□□ -0.35
HDAC6-211ENST00000443563 TSPY3P0CV98 308 aa12.85□□□□□ -0.35
HDAC6-211ENST00000443563 TSPY8P0CW00 308 aa12.85□□□□□ -0.35
HDAC6-211ENST00000443563 OSBPP22059 807 aa12.85□□□□□ -0.35
HDAC6-211ENST00000443563 GUCY1A2P33402 732 aa12.85□□□□□ -0.35
HDAC6-211ENST00000443563 CTDSPL2Q05D32 466 aa12.85□□□□□ -0.35
HDAC6-211ENST00000443563 KIAA1211Q6ZU35 1233 aa12.85□□□□□ -0.35
HDAC6-211ENST00000443563 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
HDAC6-211ENST00000443563 PLIN4Q96Q06 1357 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 MYH4Q9Y623 1939 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 TSPY2A6NKD2 308 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 GPR25O00155 361 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 ORC4O43929 436 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 TLR2O60603 784 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 FKTNO75072 461 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 CDC45O75419 566 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 PRDM1O75626 825 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 SKAP1Q86WV1 359 aa12.84□□□□□ -0.35
HDAC6-211ENST00000443563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC6-211ENST00000443563 FGRP09769 529 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 HOXA7P31268 230 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-211ENST00000443563 IRX3P78415 501 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-211ENST00000443563 TFAP4Q01664 338 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 ARHGEF6Q15052 776 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.36
HDAC6-211ENST00000443563 AKNAD1Q5T1N1 836 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 TREML2Q5T2D2 321 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 NEDD1Q8NHV4 660 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 ACER1Q8TDN7 264 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 SMCR8Q8TEV9 937 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-211ENST00000443563 STAG1Q8WVM7 1258 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 LPAR1Q92633 364 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 ESYT1Q9BSJ8 1104 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 TOMM22Q9NS69 142 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 NYAP2Q9P242 653 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 SYNPO2Q9UMS6 1093 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 TMX2Q9Y320 296 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-211ENST00000443563 CASP8AP2Q9UKL3 1982 aa12.83□□□□□ -0.36
HDAC6-211ENST00000443563 USP17L15C9J2P7 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 USP17L13C9JLJ4 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 USP17L11C9JVI0 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 USP17L18D6R9N7 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 USP17L22D6RA61 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 USP17L17D6RBQ6 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 USP17L19D6RCP7 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 USP17L20D6RJB6 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 RANBP6O60518 1105 aaKnown RBP12.82□□□□□ -0.36
HDAC6-211ENST00000443563 EEF2P13639 858 aaKnown RBP12.82□□□□□ -0.36
HDAC6-211ENST00000443563 HAND2P61296 217 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 ATP2B2Q01814 1243 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 SP3Q02447 781 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 USP17L24Q0WX57 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 KIF22Q14807 665 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 GTF3C2Q8WUA4 911 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-211ENST00000443563 ZNF296Q8WUU4 475 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-211ENST00000443563 ESR2Q92731 530 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 ERO1AQ96HE7 468 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 IL25Q9H293 177 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 CNNM2Q9H8M5 875 aa12.82□□□□□ -0.36
HDAC6-211ENST00000443563 IGKV6D-41A0A0C4DH26 115 aa12.81□□□□□ -0.36
HDAC6-211ENST00000443563 A0A1W2PRG0 241 aa12.81□□□□□ -0.36
HDAC6-211ENST00000443563 TTLL1O95922 423 aa12.81□□□□□ -0.36
HDAC6-211ENST00000443563 GCLCP48506 637 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-211ENST00000443563 FAM47AQ5JRC9 791 aa12.81□□□□□ -0.36
HDAC6-211ENST00000443563 RRP12Q5JTH9 1297 aaKnown RBP12.81□□□□□ -0.36
HDAC6-211ENST00000443563 C17orf99Q6UX52 265 aa12.81□□□□□ -0.36
HDAC6-211ENST00000443563 MAP4K1Q92918 833 aa12.81□□□□□ -0.36
HDAC6-211ENST00000443563 MKL1Q969V6 931 aa12.81□□□□□ -0.36
HDAC6-211ENST00000443563 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC6-211ENST00000443563 ASCC2Q9H1I8 757 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-211ENST00000443563 R3HDMLQ9H3Y0 253 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms