RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CTCFP49711 727 aaPredicted RBP14.63□□□□□ -0.07
USP1-203ENST00000442679 HMGCS2P54868 508 aa14.63□□□□□ -0.07
USP1-203ENST00000442679 MTMR2Q13614 643 aa14.63□□□□□ -0.07
USP1-203ENST00000442679 IMMTQ16891 758 aaKnown RBP14.63□□□□□ -0.07
USP1-203ENST00000442679 GPAT2Q6NUI2 795 aa14.63□□□□□ -0.07
USP1-203ENST00000442679 ANKRD23Q86SG2 305 aa14.63□□□□□ -0.07
USP1-203ENST00000442679 ACER1Q8TDN7 264 aa14.63□□□□□ -0.07
USP1-203ENST00000442679 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.63□□□□□ -0.07
USP1-203ENST00000442679 TACC3Q9Y6A5 838 aa14.63□□□□□ -0.07
USP1-203ENST00000442679 PDHXO00330 501 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 ORC4O43929 436 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 FGRP09769 529 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 TSPY3P0CV98 308 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 TSPY8P0CW00 308 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 TFAP4Q01664 338 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 DGKZQ13574 1117 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 SH3D19Q5HYK7 790 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 FAM47AQ5JRC9 791 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 MFSD6Q6ZSS7 791 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 PROCA1Q8NCQ7 364 aaPredicted RBP14.62□□□□□ -0.07
USP1-203ENST00000442679 FEZ1Q99689 392 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.62□□□□□ -0.07
USP1-203ENST00000442679 NBPF3Q9H094 633 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 KANSL2Q9H9L4 492 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 ZCCHC17Q9NP64 241 aaKnown RBP14.62□□□□□ -0.07
USP1-203ENST00000442679 TOMM22Q9NS69 142 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 TMOD4Q9NZQ9 345 aa14.62□□□□□ -0.07
USP1-203ENST00000442679 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
USP1-203ENST00000442679 RANBP6O60518 1105 aaKnown RBP14.61□□□□□ -0.07
USP1-203ENST00000442679 HSPA8P11142 646 aaKnown RBP14.61□□□□□ -0.07
USP1-203ENST00000442679 USP14P54578 494 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 ATP2B2Q01814 1243 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 ICA1Q05084 483 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 TAF1CQ15572 869 aaPredicted RBP14.61□□□□□ -0.07
USP1-203ENST00000442679 ZYXQ15942 572 aaKnown RBP14.61□□□□□ -0.07
USP1-203ENST00000442679 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
USP1-203ENST00000442679 AKNAD1Q5T1N1 836 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 TREML2Q5T2D2 321 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 USP17L2Q6R6M4 530 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 CLEC10AQ8IUN9 316 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 TBC1D10CQ8IV04 446 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 NEDD1Q8NHV4 660 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 STAG1Q8WVM7 1258 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 MAP4K1Q92918 833 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 LSG1Q9H089 658 aaKnown RBP14.61□□□□□ -0.07
USP1-203ENST00000442679 KIAA1683Q9H0B3 1180 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 RNF41Q9H4P4 317 aaPredicted RBP14.61□□□□□ -0.07
USP1-203ENST00000442679 ARHGEF10LQ9HCE6 1279 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 EMILIN3Q9NT22 766 aa14.61□□□□□ -0.07
USP1-203ENST00000442679 IGKV6D-41A0A0C4DH26 115 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 A0A1W2PRG0 241 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 TSPY2A6NKD2 308 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 PCP11498 1178 aaKnown RBP14.6□□□□□ -0.07
USP1-203ENST00000442679 EEF2P13639 858 aaKnown RBP14.6□□□□□ -0.07
USP1-203ENST00000442679 LBX1P52954 281 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 CRHR2Q13324 411 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 CFHR5Q9BXR6 569 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 R3HDMLQ9H3Y0 253 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 SH2D4AQ9H788 454 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 ZFYVE28Q9HCC9 887 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 ANO2Q9NQ90 1003 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 AGTPBP1Q9UPW5 1226 aa14.6□□□□□ -0.07
USP1-203ENST00000442679 ATAD5Q96QE3 1844 aa14.59□□□□□ -0.07
USP1-203ENST00000442679 PABPC4Q13310 644 aaKnown RBP eCLIP14.59□□□□□ -0.07
USP1-203ENST00000442679 NYAP2Q9P242 653 aa14.59□□□□□ -0.07
USP1-203ENST00000442679 CLIP2Q9UDT6 1046 aa14.59□□□□□ -0.07
USP1-203ENST00000442679 SLC45A1Q9Y2W3 748 aa14.59□□□□□ -0.07
USP1-203ENST00000442679 TMX2Q9Y320 296 aa14.59□□□□□ -0.07
USP1-203ENST00000442679 RBM8AQ9Y5S9 174 aaKnown RBP14.59□□□□□ -0.07
USP1-203ENST00000442679 LAMB1P07942 1786 aa14.59□□□□□ -0.07
USP1-203ENST00000442679 PHIPQ8WWQ0 1821 aa14.59□□□□□ -0.07
USP1-203ENST00000442679 CEP95Q96GE4 821 aa14.58□□□□□ -0.08
USP1-203ENST00000442679 C12orf42Q96LP6 360 aa14.58□□□□□ -0.08
USP1-203ENST00000442679 MTMR4Q9NYA4 1195 aa14.58□□□□□ -0.08
USP1-203ENST00000442679 GPR25O00155 361 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 TTLL1O95922 423 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 CYP21A2P08686 494 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 CYP2C8P10632 490 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 OSBPP22059 807 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 HOXA7P31268 230 aaPredicted RBP14.57□□□□□ -0.08
USP1-203ENST00000442679 PPP4R3BQ5MIZ7 849 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 ESR2Q92731 530 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 PARK7Q99497 189 aaKnown RBP14.57□□□□□ -0.08
USP1-203ENST00000442679 IL17RBQ9NRM6 502 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 PNMA3Q9UL41 463 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 NEDD4P46934 1319 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 PLIN4Q96Q06 1357 aa14.57□□□□□ -0.08
USP1-203ENST00000442679 RAD21O60216 631 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 NMT2O60551 498 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 TLR2O60603 784 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 VCAM1P19320 739 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 NT5C2P49902 561 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 KIAA1755Q5JYT7 1200 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 NKX2-3Q8TAU0 364 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 MKL1Q969V6 931 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 KRT23Q9C075 422 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 ASCC2Q9H1I8 757 aaPredicted RBP14.56□□□□□ -0.08
USP1-203ENST00000442679 VCPKMTQ9H867 229 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms