RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 USP14P54578 494 aa17.9■□□□□ 0.46
CSNK1E-210ENST00000442216 MTMR2Q13614 643 aa17.9■□□□□ 0.46
CSNK1E-210ENST00000442216 SEPT2Q15019 361 aa17.9■□□□□ 0.46
CSNK1E-210ENST00000442216 GADL1Q6ZQY3 521 aa17.9■□□□□ 0.46
CSNK1E-210ENST00000442216 DSCC1Q9BVC3 393 aa17.9■□□□□ 0.46
CSNK1E-210ENST00000442216 MYH4Q9Y623 1939 aa17.9■□□□□ 0.46
CSNK1E-210ENST00000442216 TLR2O60603 784 aa17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 RASA1P20936 1047 aa17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 HMGCS2P54868 508 aa17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 PABPC4Q13310 644 aaKnown RBP eCLIP17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 USP17L2Q6R6M4 530 aa17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 C12orf42Q96LP6 360 aa17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 PARK7Q99497 189 aaKnown RBP17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 KIAA1683Q9H0B3 1180 aa17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 R3HDMLQ9H3Y0 253 aa17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 TMOD4Q9NZQ9 345 aa17.89■□□□□ 0.45
CSNK1E-210ENST00000442216 FKTNO75072 461 aa17.88■□□□□ 0.45
CSNK1E-210ENST00000442216 ZNF444Q8N0Y2 327 aaPredicted RBP17.88■□□□□ 0.45
CSNK1E-210ENST00000442216 KANSL2Q9H9L4 492 aa17.88■□□□□ 0.45
CSNK1E-210ENST00000442216 PNMA3Q9UL41 463 aa17.88■□□□□ 0.45
CSNK1E-210ENST00000442216 FGRP09769 529 aa17.87■□□□□ 0.45
CSNK1E-210ENST00000442216 PCP11498 1178 aaKnown RBP17.87■□□□□ 0.45
CSNK1E-210ENST00000442216 HOXA7P31268 230 aaPredicted RBP17.87■□□□□ 0.45
CSNK1E-210ENST00000442216 ZNF296Q8WUU4 475 aaPredicted RBP17.87■□□□□ 0.45
CSNK1E-210ENST00000442216 FEZ1Q99689 392 aa17.87■□□□□ 0.45
CSNK1E-210ENST00000442216 SH2D4AQ9H788 454 aa17.87■□□□□ 0.45
CSNK1E-210ENST00000442216 ARHGEF10LQ9HCE6 1279 aa17.87■□□□□ 0.45
CSNK1E-210ENST00000442216 PLIN4Q96Q06 1357 aa17.87■□□□□ 0.45
CSNK1E-210ENST00000442216 NT5C2P49902 561 aa17.86■□□□□ 0.45
CSNK1E-210ENST00000442216 ICA1Q05084 483 aa17.86■□□□□ 0.45
CSNK1E-210ENST00000442216 TREML2Q5T2D2 321 aa17.86■□□□□ 0.45
CSNK1E-210ENST00000442216 EMILIN3Q9NT22 766 aa17.86■□□□□ 0.45
CSNK1E-210ENST00000442216 CTNNA3Q9UI47 895 aa17.86■□□□□ 0.45
CSNK1E-210ENST00000442216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.86■□□□□ 0.45
CSNK1E-210ENST00000442216 ADGRA2Q96PE1 1338 aa17.86■□□□□ 0.45
CSNK1E-210ENST00000442216 SGSM2O43147 1006 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 MGAMO43451 1857 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 ORC4O43929 436 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 OSBPP22059 807 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 SP3Q02447 781 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 COL13A1Q5TAT6 717 aaPredicted RBP17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 C17orf99Q6UX52 265 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 STK11IPQ8N1F8 1099 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 NEDD1Q8NHV4 660 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 ACER1Q8TDN7 264 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 TMX2Q9Y320 296 aa17.85■□□□□ 0.45
CSNK1E-210ENST00000442216 IGKV6D-41A0A0C4DH26 115 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 A0A1W2PRG0 241 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 PRDM1O75626 825 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 PPP4R3BQ5MIZ7 849 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 SKAP1Q86WV1 359 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 SIAH1Q8IUQ4 282 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 LPAR1Q92633 364 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 ERO1AQ96HE7 468 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 IL25Q9H293 177 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 NYAP2Q9P242 653 aa17.84■□□□□ 0.45
CSNK1E-210ENST00000442216 ZNF213O14771 459 aa17.83■□□□□ 0.44
CSNK1E-210ENST00000442216 TSPY3P0CV98 308 aa17.83■□□□□ 0.44
CSNK1E-210ENST00000442216 TSPY8P0CW00 308 aa17.83■□□□□ 0.44
CSNK1E-210ENST00000442216 CYP2C8P10632 490 aa17.83■□□□□ 0.44
CSNK1E-210ENST00000442216 EEF2P13639 858 aaKnown RBP17.83■□□□□ 0.44
CSNK1E-210ENST00000442216 STAG1Q8WVM7 1258 aa17.83■□□□□ 0.44
CSNK1E-210ENST00000442216 RNF41Q9H4P4 317 aaPredicted RBP17.83■□□□□ 0.44
CSNK1E-210ENST00000442216 SYNPO2Q9UMS6 1093 aa17.83■□□□□ 0.44
CSNK1E-210ENST00000442216 PARP14Q460N5 1801 aa17.83■□□□□ 0.44
CSNK1E-210ENST00000442216 USP17L15C9J2P7 530 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 USP17L13C9JLJ4 530 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 USP17L11C9JVI0 530 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 USP17L18D6R9N7 530 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 USP17L22D6RA61 530 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 USP17L17D6RBQ6 530 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 USP17L19D6RCP7 530 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 USP17L20D6RJB6 530 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 GCLCP48506 637 aaPredicted RBP17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 IRX3P78415 501 aaPredicted RBP17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 TFAP4Q01664 338 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 USP17L24Q0WX57 530 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 DGKZQ13574 1117 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 ARHGEF6Q15052 776 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 ZYXQ15942 572 aaKnown RBP17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 IMMTQ16891 758 aaKnown RBP17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 AKNAD1Q5T1N1 836 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 MFSD6Q6ZSS7 791 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 SMCR8Q8TEV9 937 aaPredicted RBP17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 GTF3C2Q8WUA4 911 aaPredicted RBP17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 MKL1Q969V6 931 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 ASCC2Q9H1I8 757 aaPredicted RBP17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 VCPKMTQ9H867 229 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 MTMR4Q9NYA4 1195 aa17.82■□□□□ 0.44
CSNK1E-210ENST00000442216 RLFQ13129 1914 aa17.81■□□□□ 0.44
CSNK1E-210ENST00000442216 TSPY2A6NKD2 308 aa17.81■□□□□ 0.44
CSNK1E-210ENST00000442216 BCRP11274 1271 aa17.81■□□□□ 0.44
CSNK1E-210ENST00000442216 VCAM1P19320 739 aa17.81■□□□□ 0.44
CSNK1E-210ENST00000442216 CATSPERGQ6ZRH7 1159 aa17.81■□□□□ 0.44
CSNK1E-210ENST00000442216 CTU1Q7Z7A3 348 aaKnown RBP17.81■□□□□ 0.44
CSNK1E-210ENST00000442216 CLEC10AQ8IUN9 316 aa17.81■□□□□ 0.44
CSNK1E-210ENST00000442216 GOPCQ9HD26 462 aa17.81■□□□□ 0.44
CSNK1E-210ENST00000442216 TTLL1O95922 423 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms