RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 TUBB4AP04350 444 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 PRDX5P30044 214 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 GALNT17Q6IS24 598 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 METTL16Q86W50 562 aaKnown RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 MLKLQ8NB16 471 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 CCDC150Q8NCX0 1101 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 CTCFLQ8NI51 663 aaPredicted RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 NUP133Q8WUM0 1156 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 CACTINQ8WUQ7 758 aaKnown RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 CRAMP1Q96RY5 1269 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 LZTS2Q9BRK4 669 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 KCNJ14Q9UNX9 436 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 LTBP1Q14766 1721 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 NAV1Q8NEY1 1877 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 PLCG2P16885 1265 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 CALML3P27482 149 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 SMARCA1P28370 1054 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 NOVP48745 357 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 MYL5Q02045 173 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 SEMA3FQ13275 785 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 NPY5RQ15761 445 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 PFKFB3Q16875 520 aaPredicted RBP9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 CCDC144BQ3MJ40 725 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 LONRF3Q496Y0 759 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 RCSD1Q6JBY9 416 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 PRR5LQ6MZQ0 368 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 OLFM4Q6UX06 510 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 FAM196AQ6ZSG2 479 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 SH3RF1Q7Z6J0 888 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 AMIGO3Q86WK7 504 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 DZIP1Q86YF9 867 aaKnown RBP9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 SLF2Q8IX21 1173 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 CNNM3Q8NE01 707 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 SHISA4Q96DD7 197 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 RBM17Q96I25 401 aaKnown RBP9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 ZNF287Q9HBT7 754 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 TFCP2L1Q9NZI6 479 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 SUGT1Q9Y2Z0 365 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 C10orf71Q711Q0 1435 aa9.4□□□□□ -0.9
SPIRE1-204ENST00000440472 UQCRHLA0A096LP55 91 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 UQCRHP07919 91 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 KCNQ4P56696 695 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 ST5P78524 1137 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 GRM4Q14833 912 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 TXNRD3Q86VQ6 643 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 AMOTL1Q8IY63 956 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 DAGLBQ8NCG7 672 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 TBC1D22AQ8WUA7 517 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 CLIC6Q96NY7 704 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 HSD3B7Q9H2F3 369 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 NRBP1Q9UHY1 535 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 PCDHB6Q9Y5E3 794 aa9.4□□□□□ -0.91
SPIRE1-204ENST00000440472 FAM205AQ6ZU69 1335 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 CYP2D7A0A087X1C5 515 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 GPR75-ASB3A0A0A6YYF3 556 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 UBE2Q2LH0YL09 131 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 KIF2AO00139 706 aaPredicted RBP9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 ACTN4O43707 911 aaKnown RBP9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 SCG2P13521 617 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 GYS1P13807 737 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 ERCC5P28715 1186 aaPredicted RBP9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 NR5A1Q13285 461 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 MORC3Q14149 939 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 SYCP1Q15431 976 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 FOXP4Q8IVH2 680 aaPredicted RBP9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 SRBD1Q8N5C6 995 aaKnown RBP9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 ENOX1Q8TC92 643 aaKnown RBP9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 OXER1Q8TDS5 423 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 V9GY48 417 aaPredicted RBP9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 GAKO14976 1311 aa9.39□□□□□ -0.91
SPIRE1-204ENST00000440472 PLEKHA8P1O95397 391 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 CCZ1BP86790 482 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 CCZ1P86791 482 aaPredicted RBP9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 ATP2C1P98194 919 aaPredicted RBP9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 CHAF1AQ13111 956 aaPredicted RBP9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 POSTNQ15063 836 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 ARL6IP4Q66PJ3 421 aaKnown RBP9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 CABP5Q9NP86 173 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 ANKIB1Q9P2G1 1089 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 NRXN2Q9P2S2 1712 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 TAOK2Q9UL54 1235 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 PAXBP1Q9Y5B6 917 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 PCDHA5Q9Y5H7 936 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 FOCADQ5VW36 1801 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 CDK5RAP2Q96SN8 1893 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 QSER1Q2KHR3 1735 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 TSPY2A6NKD2 308 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 SMC2O95347 1197 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 SLFN14P0C7P3 912 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 FANCCQ00597 558 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 PNOCQ13519 176 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 DNTTIP2Q5QJE6 756 aaKnown RBP9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 RPGRQ92834 1020 aaKnown RBP9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 RTFDC1Q9BY42 306 aaPredicted RBP9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 CD209Q9NNX6 404 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 LRRC4BQ9NT99 713 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 MCM9Q9NXL9 1143 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 GGA1Q9UJY5 639 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms