RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 TATDN1Q6P1N9 297 aa25.22■■□□□ 1.63
TRIM39-210ENST00000440271 ZNF512BQ96KM6 892 aaPredicted RBP25.22■■□□□ 1.63
TRIM39-210ENST00000440271 FEZ1Q99689 392 aa25.22■■□□□ 1.63
TRIM39-210ENST00000440271 PIH1D3Q9NQM4 214 aaKnown RBP25.22■■□□□ 1.63
TRIM39-210ENST00000440271 TNNQ9UQP3 1299 aa25.22■■□□□ 1.63
TRIM39-210ENST00000440271 CDK5RAP2Q96SN8 1893 aa25.21■■□□□ 1.63
TRIM39-210ENST00000440271 SLC15A5A6NIM6 579 aa25.21■■□□□ 1.63
TRIM39-210ENST00000440271 PTPREP23469 700 aa25.21■■□□□ 1.63
TRIM39-210ENST00000440271 WDR78Q5VTH9 848 aa25.21■■□□□ 1.63
TRIM39-210ENST00000440271 CATSPERGQ6ZRH7 1159 aa25.21■■□□□ 1.63
TRIM39-210ENST00000440271 LBHD1Q9BQE6 289 aaPredicted RBP25.21■■□□□ 1.63
TRIM39-210ENST00000440271 DDX20Q9UHI6 824 aaKnown RBP25.21■■□□□ 1.63
TRIM39-210ENST00000440271 MAST2Q6P0Q8 1798 aa25.21■■□□□ 1.63
TRIM39-210ENST00000440271 CYP7A1P22680 504 aa25.2■■□□□ 1.62
TRIM39-210ENST00000440271 GUCD1Q96NT3 240 aa25.2■■□□□ 1.62
TRIM39-210ENST00000440271 FOCADQ5VW36 1801 aa25.2■■□□□ 1.62
TRIM39-210ENST00000440271 CNGA1P29973 690 aa25.19■■□□□ 1.62
TRIM39-210ENST00000440271 USP14P54578 494 aa25.19■■□□□ 1.62
TRIM39-210ENST00000440271 ATP2B2Q01814 1243 aa25.19■■□□□ 1.62
TRIM39-210ENST00000440271 OS9Q13438 667 aaPredicted RBP25.19■■□□□ 1.62
TRIM39-210ENST00000440271 POLA2Q14181 598 aa25.19■■□□□ 1.62
TRIM39-210ENST00000440271 LPAR1Q92633 364 aa25.19■■□□□ 1.62
TRIM39-210ENST00000440271 COL25A1Q9BXS0 654 aaPredicted RBP25.19■■□□□ 1.62
TRIM39-210ENST00000440271 KIAA1683Q9H0B3 1180 aa25.19■■□□□ 1.62
TRIM39-210ENST00000440271 MSCO60682 206 aa25.18■■□□□ 1.62
TRIM39-210ENST00000440271 HOXC6P09630 235 aa25.18■■□□□ 1.62
TRIM39-210ENST00000440271 ATN1P54259 1190 aaPredicted RBP25.18■■□□□ 1.62
TRIM39-210ENST00000440271 RAB3GAP1Q15042 981 aa25.18■■□□□ 1.62
TRIM39-210ENST00000440271 LBX2Q6XYB7 198 aa25.18■■□□□ 1.62
TRIM39-210ENST00000440271 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.18■■□□□ 1.62
TRIM39-210ENST00000440271 FRAT1Q92837 279 aaPredicted RBP25.18■■□□□ 1.62
TRIM39-210ENST00000440271 CLUAP1Q96AJ1 413 aa25.18■■□□□ 1.62
TRIM39-210ENST00000440271 BTBD7Q9P203 1132 aa25.18■■□□□ 1.62
TRIM39-210ENST00000440271 SERPINB13Q9UIV8 391 aa25.18■■□□□ 1.62
TRIM39-210ENST00000440271 IVNS1ABPQ9Y6Y0 642 aa25.18■■□□□ 1.62
TRIM39-210ENST00000440271 VCAM1P19320 739 aa25.17■■□□□ 1.62
TRIM39-210ENST00000440271 USP5P45974 858 aa25.17■■□□□ 1.62
TRIM39-210ENST00000440271 GRB14Q14449 540 aa25.17■■□□□ 1.62
TRIM39-210ENST00000440271 MIGA1Q8NAN2 632 aa25.17■■□□□ 1.62
TRIM39-210ENST00000440271 NPLOC4Q8TAT6 608 aa25.17■■□□□ 1.62
TRIM39-210ENST00000440271 ACER1Q8TDN7 264 aa25.17■■□□□ 1.62
TRIM39-210ENST00000440271 EHD4Q9H223 541 aa25.17■■□□□ 1.62
TRIM39-210ENST00000440271 DNM1LO00429 736 aa25.16■■□□□ 1.62
TRIM39-210ENST00000440271 SURF6O75683 361 aaKnown RBP25.16■■□□□ 1.62
TRIM39-210ENST00000440271 CYP2C19P33261 490 aa25.16■■□□□ 1.62
TRIM39-210ENST00000440271 ABCB5Q2M3G0 1257 aa25.16■■□□□ 1.62
TRIM39-210ENST00000440271 CERKLQ49MI3 558 aaPredicted RBP25.16■■□□□ 1.62
TRIM39-210ENST00000440271 SSH3Q8TE77 659 aa25.16■■□□□ 1.62
TRIM39-210ENST00000440271 FAM161BQ96MY7 647 aa25.16■■□□□ 1.62
TRIM39-210ENST00000440271 DNAH12Q6ZR08 3092 aa25.16■■□□□ 1.62
TRIM39-210ENST00000440271 UNC80Q8N2C7 3258 aa25.15■■□□□ 1.62
TRIM39-210ENST00000440271 MYO5AQ9Y4I1 1855 aaKnown RBP25.15■■□□□ 1.62
TRIM39-210ENST00000440271 BCAR3O75815 825 aa25.15■■□□□ 1.62
TRIM39-210ENST00000440271 IDH1O75874 414 aaKnown RBP25.15■■□□□ 1.62
TRIM39-210ENST00000440271 ATP8B2P98198 1209 aa25.15■■□□□ 1.62
TRIM39-210ENST00000440271 TTC6Q86TZ1 520 aa25.15■■□□□ 1.62
TRIM39-210ENST00000440271 CERS3Q8IU89 383 aa25.15■■□□□ 1.62
TRIM39-210ENST00000440271 TRPV1Q8NER1 839 aa25.15■■□□□ 1.62
TRIM39-210ENST00000440271 PRKAG2Q9UGJ0 569 aa25.15■■□□□ 1.62
TRIM39-210ENST00000440271 DBNLQ9UJU6 430 aaKnown RBP25.15■■□□□ 1.62
TRIM39-210ENST00000440271 FRMPD3Q5JV73 1810 aa25.14■■□□□ 1.62
TRIM39-210ENST00000440271 IGHA2P01877 340 aa25.14■■□□□ 1.62
TRIM39-210ENST00000440271 RTP1P59025 263 aa25.14■■□□□ 1.62
TRIM39-210ENST00000440271 RPAP3Q9H6T3 665 aaPredicted RBP25.14■■□□□ 1.62
TRIM39-210ENST00000440271 CABP5Q9NP86 173 aa25.14■■□□□ 1.62
TRIM39-210ENST00000440271 SPDYE16A6NNV3 312 aaPredicted RBP25.13■■□□□ 1.61
TRIM39-210ENST00000440271 MAGEB6Q8N7X4 407 aa25.13■■□□□ 1.61
TRIM39-210ENST00000440271 CCDC8Q9H0W5 538 aaPredicted RBP25.13■■□□□ 1.61
TRIM39-210ENST00000440271 TLR7Q9NYK1 1049 aaKnown RBP25.13■■□□□ 1.61
TRIM39-210ENST00000440271 CYBAP13498 195 aa25.12■■□□□ 1.61
TRIM39-210ENST00000440271 GJC2Q5T442 439 aaPredicted RBP25.12■■□□□ 1.61
TRIM39-210ENST00000440271 ZNF697Q5TEC3 545 aa25.12■■□□□ 1.61
TRIM39-210ENST00000440271 TMEM57Q8N5G2 664 aa25.12■■□□□ 1.61
TRIM39-210ENST00000440271 MYH1P12882 1939 aa25.12■■□□□ 1.61
TRIM39-210ENST00000440271 SHMT1P34896 483 aa25.11■■□□□ 1.61
TRIM39-210ENST00000440271 DPP9Q86TI2 863 aa25.11■■□□□ 1.61
TRIM39-210ENST00000440271 ARRDC4Q8NCT1 418 aa25.11■■□□□ 1.61
TRIM39-210ENST00000440271 ATP11BQ9Y2G3 1177 aa25.11■■□□□ 1.61
TRIM39-210ENST00000440271 LAMA2P24043 3122 aaKnown RBP25.11■■□□□ 1.61
TRIM39-210ENST00000440271 GUCY1A2P33402 732 aa25.1■■□□□ 1.61
TRIM39-210ENST00000440271 PLCD1P51178 756 aa25.1■■□□□ 1.61
TRIM39-210ENST00000440271 SLC39A5Q6ZMH5 540 aa25.1■■□□□ 1.61
TRIM39-210ENST00000440271 EAF2Q96CJ1 260 aaPredicted RBP25.1■■□□□ 1.61
TRIM39-210ENST00000440271 NOP58Q9Y2X3 529 aaKnown RBP25.1■■□□□ 1.61
TRIM39-210ENST00000440271 STRNO43815 780 aa25.09■■□□□ 1.61
TRIM39-210ENST00000440271 ADORA2AP29274 412 aa25.09■■□□□ 1.61
TRIM39-210ENST00000440271 COG2Q14746 738 aa25.09■■□□□ 1.61
TRIM39-210ENST00000440271 SHHQ15465 462 aa25.09■■□□□ 1.61
TRIM39-210ENST00000440271 OLFML2BQ68BL8 750 aa25.09■■□□□ 1.61
TRIM39-210ENST00000440271 MOV10L1Q9BXT6 1211 aaKnown RBP25.09■■□□□ 1.61
TRIM39-210ENST00000440271 ANTXR1Q9H6X2 564 aa25.09■■□□□ 1.61
TRIM39-210ENST00000440271 HOXC10Q9NYD6 342 aa25.09■■□□□ 1.61
TRIM39-210ENST00000440271 MAP3K12Q12852 859 aa25.08■■□□□ 1.61
TRIM39-210ENST00000440271 SEPT2Q15019 361 aa25.08■■□□□ 1.61
TRIM39-210ENST00000440271 CDX2Q99626 313 aaPredicted RBP25.08■■□□□ 1.61
TRIM39-210ENST00000440271 KBTBD13C9JR72 458 aa25.07■■□□□ 1.6
TRIM39-210ENST00000440271 ANO1Q5XXA6 986 aa25.07■■□□□ 1.6
TRIM39-210ENST00000440271 TMED8Q6PL24 325 aaPredicted RBP25.07■■□□□ 1.6
TRIM39-210ENST00000440271 C1orf115Q9H7X2 142 aa25.07■■□□□ 1.6
TRIM39-210ENST00000440271 A0A1W2PRG0 241 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms