RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 DDAH1O94760 285 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 PLEKHA8P1O95397 391 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 IFNAR1P17181 557 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 SSRP1Q08945 709 aaKnown RBP13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 NBPF9Q3BBW0 867 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 CCDC178Q5BJE1 867 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 FAM173BQ6P4H8 233 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 DGKHQ86XP1 1220 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 CLEC10AQ8IUN9 316 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 MTMR14Q8NCE2 650 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 CEP95Q96GE4 821 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 TMEM47Q9BQJ4 181 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 CNTNAP1P78357 1384 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 PLIN4Q96Q06 1357 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 GOLGA6L22H0YM25 854 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 FMNL1O95466 1100 aaPredicted RBP13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 EGFRP00533 1210 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 CALM1P0DP23 149 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 CALM2P0DP24 149 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 CALM3P0DP25 149 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 RESTQ13127 1097 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 NBPF11Q86T75 865 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 ANKS1AQ92625 1134 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 ZBED3Q96IU2 234 aaPredicted RBP13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 C8orf76Q96K31 380 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 ALG1Q9BT22 464 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 GDPD2Q9HCC8 539 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 CNPY2Q9Y2B0 182 aa13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 STK36Q9NRP7 1315 aa13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 CCDC196A0A1B0GTZ2 297 aa13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 MPHOSPH10O00566 681 aaKnown RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 WNT10BO00744 389 aa13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 PDIA4P13667 645 aaKnown RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 YBX3P16989 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 NCLP19338 710 aaKnown RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 RPS12P25398 132 aaKnown RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 GUCY1A2P33402 732 aa13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 DNM1Q05193 864 aaKnown RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 SHROOM1Q2M3G4 852 aaPredicted RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 CTCFLQ8NI51 663 aaPredicted RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 SCAF8Q9UPN6 1271 aaKnown RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
SMPD4P2-201ENST00000440167 hCG_1642624A0A1W2PR95 340 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 PRPF40AO75400 957 aaKnown RBP13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 LMNB1P20700 586 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 ZNF280AP59817 542 aaPredicted RBP13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 TBC1D10BQ4KMP7 808 aaPredicted RBP13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 SAMD7Q7Z3H4 446 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 FAM151AQ8WW52 585 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 CSRNP1Q96S65 589 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 LMBRD1Q9NUN5 540 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 CNOT7Q9UIV1 285 aaKnown RBP13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 ATP6V1DQ9Y5K8 247 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 CNTNAP5Q8WYK1 1306 aa13.33□□□□□ -0.28
SMPD4P2-201ENST00000440167 IGKV6D-41A0A0C4DH26 115 aa13.32□□□□□ -0.28
SMPD4P2-201ENST00000440167 MYO1BO43795 1136 aa13.32□□□□□ -0.28
SMPD4P2-201ENST00000440167 GDF11O95390 407 aa13.32□□□□□ -0.28
SMPD4P2-201ENST00000440167 TRIM22Q8IYM9 498 aa13.32□□□□□ -0.28
SMPD4P2-201ENST00000440167 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
SMPD4P2-201ENST00000440167 ASTN2O75129 1339 aaPredicted RBP13.32□□□□□ -0.28
SMPD4P2-201ENST00000440167 FIBPO43427 364 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 TRAK2O60296 914 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 FUT2Q10981 343 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 GRM4Q14833 912 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 PPP2R5BQ15173 497 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 CERKLQ49MI3 558 aaPredicted RBP13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 FOXP4Q8IVH2 680 aaPredicted RBP13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 LRRC47Q8N1G4 583 aaKnown RBP13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 STAG2Q8N3U4 1231 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 SRBD1Q8N5C6 995 aaKnown RBP13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 FBXO18Q8NFZ0 1043 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 MTMR4Q9NYA4 1195 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 DEXIO95424 95 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 TOP1P11387 765 aaKnown RBP13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 PTMSP20962 102 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 KRT40Q6A162 431 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 TATDN1Q6P1N9 297 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 USP48Q86UV5 1035 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 PIBF1Q8WXW3 757 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 DPF2Q92785 391 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 RNF26Q9BY78 433 aaPredicted RBP13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 MAD2L2Q9UI95 211 aa13.31□□□□□ -0.28
SMPD4P2-201ENST00000440167 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 GOLGA8HP0CJ92 632 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 KIF5BP33176 963 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 NOVP48745 357 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms