RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 RTEL1Q9NZ71 1219 aa17.29■□□□□ 0.36
IFT140-204ENST00000439987 ZBTB7AO95365 584 aa17.28■□□□□ 0.36
IFT140-204ENST00000439987 AKAP17AQ02040 695 aaKnown RBP17.28■□□□□ 0.36
IFT140-204ENST00000439987 U2AF2P26368 475 aaKnown RBP eCLIP17.28■□□□□ 0.366e-7■■■■□ 26.4
IFT140-204ENST00000439987 MYH6P13533 1939 aa17.27■□□□□ 0.36
IFT140-204ENST00000439987 YDJCA8MPS7 323 aa17.27■□□□□ 0.36
IFT140-204ENST00000439987 PRPF3O43395 683 aaKnown RBP17.27■□□□□ 0.36
IFT140-204ENST00000439987 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.36
IFT140-204ENST00000439987 LIG1P18858 919 aa17.27■□□□□ 0.36
IFT140-204ENST00000439987 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
IFT140-204ENST00000439987 PNMA1Q8ND90 353 aa17.27■□□□□ 0.36
IFT140-204ENST00000439987 POLR3EQ9NVU0 708 aa17.27■□□□□ 0.36
IFT140-204ENST00000439987 MMP1P03956 469 aa17.27■□□□□ 0.35
IFT140-204ENST00000439987 NEDD1Q8NHV4 660 aa17.27■□□□□ 0.35
IFT140-204ENST00000439987 OSBPL5Q9H0X9 879 aaPredicted RBP17.27■□□□□ 0.35
IFT140-204ENST00000439987 KIF5BP33176 963 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 GABPAQ06546 454 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 BICD2Q8TD16 824 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 MAP3K14Q99558 947 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 SERPINA10Q9UK55 444 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 TERF1P54274 439 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 CCDC173Q0VFZ6 552 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 SAFBQ15424 915 aaKnown RBP eCLIP17.26■□□□□ 0.35
IFT140-204ENST00000439987 PKN1Q16512 942 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 LINC00301Q8NCQ3 95 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.26■□□□□ 0.35
IFT140-204ENST00000439987 STX8Q9UNK0 236 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 CLIC4Q9Y696 253 aa17.26■□□□□ 0.35
IFT140-204ENST00000439987 V9GY48 417 aaPredicted RBP17.26■□□□□ 0.35
IFT140-204ENST00000439987 YEATS4O95619 227 aa17.25■□□□□ 0.35
IFT140-204ENST00000439987 NASPP49321 788 aaPredicted RBP17.25■□□□□ 0.35
IFT140-204ENST00000439987 RBM5P52756 815 aaKnown RBP eCLIP17.25■□□□□ 0.35
IFT140-204ENST00000439987 TGFB2P61812 414 aa17.25■□□□□ 0.35
IFT140-204ENST00000439987 SRBD1Q8N5C6 995 aaKnown RBP17.25■□□□□ 0.35
IFT140-204ENST00000439987 KCNJ14Q9UNX9 436 aa17.25■□□□□ 0.35
IFT140-204ENST00000439987 PCDHAC2Q9Y5I4 1007 aa17.25■□□□□ 0.35
IFT140-204ENST00000439987 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
IFT140-204ENST00000439987 POLD1P28340 1107 aa17.25■□□□□ 0.35
IFT140-204ENST00000439987 NFIAQ12857 509 aa17.25■□□□□ 0.35
IFT140-204ENST00000439987 TMEM47Q9BQJ4 181 aa17.25■□□□□ 0.35
IFT140-204ENST00000439987 MTFR1LQ9H019 292 aa17.25■□□□□ 0.35
IFT140-204ENST00000439987 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
IFT140-204ENST00000439987 XBP1P17861 261 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 ME1P48163 572 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 DIS3L2Q8IYB7 885 aaKnown RBP17.24■□□□□ 0.35
IFT140-204ENST00000439987 DACT1Q9NYF0 836 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 SERPINB13Q9UIV8 391 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 BTBD18B2RXH4 712 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 STK38Q15208 465 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 ANO1Q5XXA6 986 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 NOSTRINQ8IVI9 506 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 KCNG4Q8TDN1 519 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 FOXP1Q9H334 677 aaPredicted RBP17.24■□□□□ 0.35
IFT140-204ENST00000439987 PIM2Q9P1W9 311 aa17.24■□□□□ 0.35
IFT140-204ENST00000439987 PSME4Q14997 1843 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 hCG_1642624A0A1W2PR95 340 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 GRM4Q14833 912 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 ANP32BQ92688 251 aaKnown RBP17.23■□□□□ 0.35
IFT140-204ENST00000439987 RBSNQ9H1K0 784 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 ZNF277Q9NRM2 450 aaPredicted RBP17.23■□□□□ 0.35
IFT140-204ENST00000439987 DDX19AQ9NUU7 478 aaKnown RBP17.23■□□□□ 0.35
IFT140-204ENST00000439987 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 PLIN4Q96Q06 1357 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 HLA-DOAP06340 250 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 PPP1R9BQ96SB3 815 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 IDI2Q9BXS1 227 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 TSPY26PQ9H489 355 aa17.23■□□□□ 0.35
IFT140-204ENST00000439987 SPTLC2O15270 562 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 NR1I2O75469 434 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 SHISA4Q96DD7 197 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 NUP62CLQ9H1M0 184 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 VPS54Q9P1Q0 977 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 PCDHA7Q9UN72 937 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 MYO3BQ8WXR4 1341 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 BAZ2BQ9UIF8 2168 aaKnown RBP17.22■□□□□ 0.35
IFT140-204ENST00000439987 NOVP48745 357 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 GNAQP50148 359 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 CACNB3P54284 484 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
IFT140-204ENST00000439987 CCAR1Q8IX12 1150 aaKnown RBP17.22■□□□□ 0.35
IFT140-204ENST00000439987 MAD2L2Q9UI95 211 aa17.22■□□□□ 0.35
IFT140-204ENST00000439987 ADALQ6DHV7 355 aa17.21■□□□□ 0.35
IFT140-204ENST00000439987 STAG2Q8N3U4 1231 aa17.21■□□□□ 0.35
IFT140-204ENST00000439987 PHF20Q9BVI0 1012 aa17.21■□□□□ 0.35
IFT140-204ENST00000439987 EHD4Q9H223 541 aa17.21■□□□□ 0.35
IFT140-204ENST00000439987 MYH8P13535 1937 aa17.21■□□□□ 0.35
IFT140-204ENST00000439987 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
IFT140-204ENST00000439987 SLC39A14Q15043 492 aa17.21■□□□□ 0.35
IFT140-204ENST00000439987 ZSCAN30Q86W11 494 aa17.21■□□□□ 0.35
IFT140-204ENST00000439987 ZFPM1Q8IX07 1006 aa17.21■□□□□ 0.35
IFT140-204ENST00000439987 DHX36Q9H2U1 1008 aaKnown RBP17.21■□□□□ 0.35
IFT140-204ENST00000439987 FAM198AQ9UFP1 575 aa17.21■□□□□ 0.35
IFT140-204ENST00000439987 COL4A5P29400 1685 aa17.21■□□□□ 0.34
IFT140-204ENST00000439987 TOP1P11387 765 aaKnown RBP17.2■□□□□ 0.34
IFT140-204ENST00000439987 RSBN1LQ6PCB5 846 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms