RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 USP17L18D6R9N7 530 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 USP17L22D6RA61 530 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 USP17L17D6RBQ6 530 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 USP17L19D6RCP7 530 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 USP17L20D6RJB6 530 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 USP17L24Q0WX57 530 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 ZYXQ15942 572 aaKnown RBP19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 UBE2Q1Q7Z7E8 422 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 ACER1Q8TDN7 264 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 RBPJLQ9UBG7 517 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 MYH7P12883 1935 aa19.62■□□□□ 0.73
SNRPD3-204ENST00000439775 PRKAB2O43741 272 aa19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 CYP2D6P10635 497 aa19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 VCAM1P19320 739 aa19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 MAPK4P31152 587 aa19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 ERVK-9P63128 1117 aa19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 ERVK-24P63145 666 aa19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 U2AF1L4Q8WU68 220 aaKnown RBP19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 SOCS4Q8WXH5 440 aa19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 GCC1Q96CN9 775 aa19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 PAK6Q9NQU5 681 aaPredicted RBP19.61■□□□□ 0.73
SNRPD3-204ENST00000439775 HMGCRP04035 888 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 CHGBP05060 677 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 RRP1P56182 461 aaKnown RBP19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 SEPT2Q15019 361 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 C12orf60Q5U649 245 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 POTEEQ6S8J3 1075 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 LBX2Q6XYB7 198 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 CATSPERGQ6ZRH7 1159 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 TMEM179Q6ZVK1 233 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 AMOTL1Q8IY63 956 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 DDRGK1Q96HY6 314 aa19.6■□□□□ 0.73
SNRPD3-204ENST00000439775 MPHOSPH10O00566 681 aaKnown RBP19.59■□□□□ 0.73
SNRPD3-204ENST00000439775 PEX10O60683 326 aa19.59■□□□□ 0.73
SNRPD3-204ENST00000439775 SGPL1O95470 568 aa19.59■□□□□ 0.73
SNRPD3-204ENST00000439775 KBTBD3Q8NAB2 608 aa19.59■□□□□ 0.73
SNRPD3-204ENST00000439775 SLC44A5Q8NCS7 719 aa19.59■□□□□ 0.73
SNRPD3-204ENST00000439775 PAGR1Q9BTK6 254 aa19.59■□□□□ 0.73
SNRPD3-204ENST00000439775 PUS7LQ9H0K6 701 aaKnown RBP19.59■□□□□ 0.73
SNRPD3-204ENST00000439775 RABGAP1Q9Y3P9 1069 aa19.59■□□□□ 0.73
SNRPD3-204ENST00000439775 PLXNB2O15031 1838 aa19.59■□□□□ 0.73
SNRPD3-204ENST00000439775 DOCK3Q8IZD9 2030 aa19.58■□□□□ 0.73
SNRPD3-204ENST00000439775 XRCC5P13010 732 aaKnown RBP19.58■□□□□ 0.72
SNRPD3-204ENST00000439775 DYNLL2Q96FJ2 89 aa19.58■□□□□ 0.72
SNRPD3-204ENST00000439775 NUDT12Q9BQG2 462 aa19.58■□□□□ 0.72
SNRPD3-204ENST00000439775 PORCNQ9H237 461 aa19.58■□□□□ 0.72
SNRPD3-204ENST00000439775 PCDHB15Q9Y5E8 787 aa19.58■□□□□ 0.72
SNRPD3-204ENST00000439775 SLC4A4Q9Y6R1 1079 aa19.58■□□□□ 0.72
SNRPD3-204ENST00000439775 A0A1W2PRG0 241 aa19.57■□□□□ 0.72
SNRPD3-204ENST00000439775 USP17L12C9JPN9 530 aa19.57■□□□□ 0.72
SNRPD3-204ENST00000439775 USP17L21D6R901 530 aa19.57■□□□□ 0.72
SNRPD3-204ENST00000439775 Q3C1V9 767 aa19.57■□□□□ 0.72
SNRPD3-204ENST00000439775 C16orf86Q6ZW13 317 aa19.57■□□□□ 0.72
SNRPD3-204ENST00000439775 CCDC17Q96LX7 622 aa19.57■□□□□ 0.72
SNRPD3-204ENST00000439775 DEFB118Q96PH6 123 aa19.57■□□□□ 0.72
SNRPD3-204ENST00000439775 RPAP3Q9H6T3 665 aaPredicted RBP19.57■□□□□ 0.72
SNRPD3-204ENST00000439775 ARPP21Q9UBL0 812 aaPredicted RBP19.57■□□□□ 0.72
SNRPD3-204ENST00000439775 TTC41PQ6P2S7 1318 aa19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 CNMDO75829 334 aa19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 FARP2O94887 1054 aaPredicted RBP19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 ZFYP08048 801 aaPredicted RBP19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 CCNA1P78396 465 aa19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 TSHZ3Q63HK5 1081 aa19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 GPR142Q7Z601 462 aa19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 CCAR1Q8IX12 1150 aaKnown RBP19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 TRMT44Q8IYL2 757 aaKnown RBP19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 TRIB2Q92519 343 aa19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 APPBP2Q92624 585 aa19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 USP6NLQ92738 828 aa19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 CRISPLD2Q9H0B8 497 aa19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 BAZ2AQ9UIF9 1905 aaKnown RBP19.56■□□□□ 0.72
SNRPD3-204ENST00000439775 RPTORQ8N122 1335 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 CYP2D7A0A087X1C5 515 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 SPDYE16A6NNV3 312 aaPredicted RBP19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 AKR1B1P15121 316 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 CDK8P49336 464 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 ICA1Q05084 483 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 MORN1Q5T089 497 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 GIMAP6Q6P9H5 292 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 CTR9Q6PD62 1173 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 PLEKHH3Q7Z736 793 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 LPAR1Q92633 364 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 STRBPQ96SI9 672 aaKnown RBP19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 HTATIP2Q9BUP3 242 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 SH2D4AQ9H788 454 aa19.55■□□□□ 0.72
SNRPD3-204ENST00000439775 SMIM22K7EJ46 135 aa19.54■□□□□ 0.72
SNRPD3-204ENST00000439775 ERC2O15083 957 aa19.54■□□□□ 0.72
SNRPD3-204ENST00000439775 CYP2B6P20813 491 aa19.54■□□□□ 0.72
SNRPD3-204ENST00000439775 MAP3K21Q5TCX8 1036 aa19.54■□□□□ 0.72
SNRPD3-204ENST00000439775 APBA2Q99767 749 aa19.54■□□□□ 0.72
SNRPD3-204ENST00000439775 ARHGEF10LQ9HCE6 1279 aa19.54■□□□□ 0.72
SNRPD3-204ENST00000439775 HMX1Q9NP08 348 aaPredicted RBP19.54■□□□□ 0.72
SNRPD3-204ENST00000439775 MYH8P13535 1937 aa19.54■□□□□ 0.72
SNRPD3-204ENST00000439775 RNF113AO15541 343 aaKnown RBP19.53■□□□□ 0.72
SNRPD3-204ENST00000439775 TFRCP02786 760 aaKnown RBP19.53■□□□□ 0.72
SNRPD3-204ENST00000439775 RGS2P41220 211 aa19.53■□□□□ 0.72
SNRPD3-204ENST00000439775 LRRFIP1Q32MZ4 808 aaKnown RBP19.53■□□□□ 0.72
SNRPD3-204ENST00000439775 SBK1Q52WX2 424 aa19.53■□□□□ 0.72
SNRPD3-204ENST00000439775 SIAH1Q8IUQ4 282 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms