RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 GIMAP6Q6P9H5 292 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 CTR9Q6PD62 1173 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 LYPD8Q6UX82 237 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 STOX1Q6ZVD7 989 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 CERS3Q8IU89 383 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 ZNF687Q8N1G0 1237 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 TGFBRAP1Q8WUH2 860 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 PRMT6Q96LA8 375 aaPredicted RBP8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 NOL10Q9BSC4 688 aaKnown RBP8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 NACAP1Q9BZK3 213 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 DCP1AQ9NPI6 582 aaPredicted RBP8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 TFIP11Q9UBB9 837 aaKnown RBP8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 SLC27A5Q9Y2P5 690 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 TACC3Q9Y6A5 838 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 GJA3Q9Y6H8 435 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 FER1L6Q2WGJ9 1857 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 CYP2D7A0A087X1C5 515 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 USP17L12C9JPN9 530 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 USP17L21D6R901 530 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 E7EWF7 191 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 ZNF213O14771 459 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 WDHD1O75717 1129 aaPredicted RBP8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 ATG7O95352 703 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 CYP2D6P10635 497 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 ZKSCAN1P17029 563 aaPredicted RBP8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 USP5P45974 858 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 TDO2P48775 406 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 RBM5P52756 815 aaKnown RBP eCLIP8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 HAND2P61296 217 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 NR1H3Q13133 447 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 IMMTQ16891 758 aaKnown RBP8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 SBK1Q52WX2 424 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 TBC1D10CQ8IV04 446 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 MAPKAPK5Q8IW41 473 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 TEX11Q8IYF3 940 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 GPC2Q8N158 579 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 OGFOD1Q8N543 542 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 DPF2Q92785 391 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 LRCH3Q96II8 777 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 ZBED3Q96IU2 234 aaPredicted RBP8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 TM6SF1Q9BZW5 370 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 NAPBQ9H115 298 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 GZF1Q9H116 711 aaPredicted RBP8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 TDRD3Q9H7E2 651 aaKnown RBP8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 DDX4Q9NQI0 724 aaKnown RBP8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 INCENPQ9NQS7 918 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 HDAC9Q9UKV0 1011 aa8.35□□□□□ -1.07
LSM3P3-201ENST00000436601 FLT1P17948 1338 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 ARFGEF1Q9Y6D6 1849 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 SCN9AQ15858 1988 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 DDNO94850 711 aaPredicted RBP8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 EGFRP00533 1210 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 CPA1P15085 419 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 MMP14P50281 582 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 CACNB3P54284 484 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 PPARAQ07869 468 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 NFIAQ12857 509 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 RABEP1Q15276 862 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 DLGAP5Q15398 846 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 NKX2-3Q8TAU0 364 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 JAKMIP1Q96N16 626 aaKnown RBP8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 IDI2Q9BXS1 227 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 UPF3BQ9BZI7 483 aaKnown RBP8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 MYOZ2Q9NPC6 264 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 MCM9Q9NXL9 1143 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 CNOT7Q9UIV1 285 aaKnown RBP8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 ANAPC4Q9UJX5 808 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 MAFBQ9Y5Q3 323 aaPredicted RBP8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 MAST2Q6P0Q8 1798 aa8.34□□□□□ -1.07
LSM3P3-201ENST00000436601 ZNF646O15015 1829 aaPredicted RBP8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 ZC3H4Q9UPT8 1303 aaKnown RBP8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 CHD4Q14839 1912 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 MINDY4BA8MYZ0 360 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 CD2BP2O95400 341 aaKnown RBP8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 NEK4P51957 841 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 EMP3P54852 163 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 KRT32Q14532 448 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 C12orf60Q5U649 245 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 ZFPM1Q8IX07 1006 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 OTUD5Q96G74 571 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 NEK1Q96PY6 1258 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 GPRC5DQ9NZD1 345 aa8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 ARPP21Q9UBL0 812 aaPredicted RBP8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 ZNF70Q9UC06 446 aaPredicted RBP8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 SAP30BPQ9UHR5 308 aaKnown RBP8.33□□□□□ -1.08
LSM3P3-201ENST00000436601 CLRN2A0PK11 232 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 WNT10BO00744 389 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 ATP9BO43861 1147 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 FGRP09769 529 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 CASTP20810 708 aaKnown RBP8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 RPS6KB1P23443 525 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 PSMA5P28066 241 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 ANP32AP39687 249 aaKnown RBP8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 EPS15P42566 896 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 PLCD1P51178 756 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 EXOSC10Q01780 885 aaKnown RBP8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 PICALMQ13492 652 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 SLC4A8Q2Y0W8 1093 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 NBPF9Q3BBW0 867 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms