RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 CDC37L1Q7L3B6 337 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 RAB11FIP4Q86YS3 637 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 ZNF274Q96GC6 653 aaPredicted RBP25.02■■□□□ 1.6
YBX1-203ENST00000436427 ANP32EQ9BTT0 268 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 ZNF341Q9BYN7 854 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 SLKQ9H2G2 1235 aaPredicted RBP25.02■■□□□ 1.6
YBX1-203ENST00000436427 SSC5DA1L4H1 1573 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 PDIA3P30101 505 aaKnown RBP25.02■■□□□ 1.6
YBX1-203ENST00000436427 RAB3GAP1Q15042 981 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 APOA5Q6Q788 366 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 CLEC10AQ8IUN9 316 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 NECAB1Q8N987 351 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 KAT14Q9H8E8 782 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 MTMR4Q9NYA4 1195 aa25.02■■□□□ 1.6
YBX1-203ENST00000436427 IGKV6D-41A0A0C4DH26 115 aa25.01■■□□□ 1.59
YBX1-203ENST00000436427 CAP2P40123 477 aa25.01■■□□□ 1.59
YBX1-203ENST00000436427 MAP1SQ66K74 1059 aaPredicted RBP25.01■■□□□ 1.59
YBX1-203ENST00000436427 MICU3Q86XE3 530 aa25.01■■□□□ 1.59
YBX1-203ENST00000436427 CCDC83Q8IWF9 413 aa25.01■■□□□ 1.59
YBX1-203ENST00000436427 MYL10Q9BUA6 226 aa25.01■■□□□ 1.59
YBX1-203ENST00000436427 FOXD4L1Q9NU39 408 aa25.01■■□□□ 1.59
YBX1-203ENST00000436427 GREB1LQ9C091 1923 aaPredicted RBP25■■□□□ 1.59
YBX1-203ENST00000436427 PHF20L1A8MW92 1017 aa25■■□□□ 1.59
YBX1-203ENST00000436427 ZBTB43O43298 467 aa25■■□□□ 1.59
YBX1-203ENST00000436427 JAG1P78504 1218 aa25■■□□□ 1.59
YBX1-203ENST00000436427 ATP2B2Q01814 1243 aa25■■□□□ 1.59
YBX1-203ENST00000436427 PRKG1Q13976 671 aa25■■□□□ 1.59
YBX1-203ENST00000436427 SEPT2Q15019 361 aa25■■□□□ 1.59
YBX1-203ENST00000436427 CATIPQ7Z7H3 387 aa25■■□□□ 1.59
YBX1-203ENST00000436427 LDHDQ86WU2 507 aa25■■□□□ 1.59
YBX1-203ENST00000436427 ZNF654Q8IZM8 581 aa25■■□□□ 1.59
YBX1-203ENST00000436427 ANKS1AQ92625 1134 aa25■■□□□ 1.59
YBX1-203ENST00000436427 CDCA5Q96FF9 252 aa25■■□□□ 1.59
YBX1-203ENST00000436427 FZD1Q9UP38 647 aa25■■□□□ 1.59
YBX1-203ENST00000436427 PFKFB2O60825 505 aa24.99■■□□□ 1.59
YBX1-203ENST00000436427 RXRAP19793 462 aa24.99■■□□□ 1.59
YBX1-203ENST00000436427 CCT2P78371 535 aaKnown RBP24.99■■□□□ 1.59
YBX1-203ENST00000436427 PPP4R3BQ5MIZ7 849 aa24.99■■□□□ 1.59
YBX1-203ENST00000436427 TMEM47Q9BQJ4 181 aa24.99■■□□□ 1.59
YBX1-203ENST00000436427 KANSL2Q9H9L4 492 aa24.99■■□□□ 1.59
YBX1-203ENST00000436427 ZBTB21Q9ULJ3 1066 aa24.99■■□□□ 1.59
YBX1-203ENST00000436427 TTLL1O95922 423 aa24.98■■□□□ 1.59
YBX1-203ENST00000436427 GUCY1A2P33402 732 aa24.98■■□□□ 1.59
YBX1-203ENST00000436427 NF2P35240 595 aa24.98■■□□□ 1.59
YBX1-203ENST00000436427 METAP2P50579 478 aaKnown RBP eCLIP24.98■■□□□ 1.592e-34■■■■□ 21.1
YBX1-203ENST00000436427 ICA1Q05084 483 aa24.98■■□□□ 1.59
YBX1-203ENST00000436427 CCDC144CPQ8IYA2 1237 aa24.98■■□□□ 1.59
YBX1-203ENST00000436427 NUP133Q8WUM0 1156 aa24.98■■□□□ 1.59
YBX1-203ENST00000436427 GTF3C6Q969F1 213 aa24.98■■□□□ 1.59
YBX1-203ENST00000436427 WRNIP1Q96S55 665 aa24.98■■□□□ 1.59
YBX1-203ENST00000436427 CLIP2Q9UDT6 1046 aa24.98■■□□□ 1.59
YBX1-203ENST00000436427 SCRN1Q12765 414 aa24.97■■□□□ 1.59
YBX1-203ENST00000436427 CUL4AQ13619 759 aa24.97■■□□□ 1.59
YBX1-203ENST00000436427 PNMA1Q8ND90 353 aa24.97■■□□□ 1.59
YBX1-203ENST00000436427 HPS5Q9UPZ3 1129 aa24.97■■□□□ 1.59
YBX1-203ENST00000436427 GOLGA8AA7E2F4 631 aa24.96■■□□□ 1.59
YBX1-203ENST00000436427 CTNND1O60716 968 aaKnown RBP24.96■■□□□ 1.59
YBX1-203ENST00000436427 TOP1P11387 765 aaKnown RBP24.96■■□□□ 1.59
YBX1-203ENST00000436427 NOVP48745 357 aa24.96■■□□□ 1.59
YBX1-203ENST00000436427 NCOA5Q9HCD5 579 aaKnown RBP24.96■■□□□ 1.59
YBX1-203ENST00000436427 PPP1R12BO60237 982 aaPredicted RBP24.96■■□□□ 1.59
YBX1-203ENST00000436427 DDAH1O94760 285 aa24.96■■□□□ 1.59
YBX1-203ENST00000436427 ASNSP08243 561 aa24.96■■□□□ 1.59
YBX1-203ENST00000436427 INPP5BP32019 993 aa24.96■■□□□ 1.59
YBX1-203ENST00000436427 ST3GAL1Q11201 340 aa24.96■■□□□ 1.59
YBX1-203ENST00000436427 LRRC47Q8N1G4 583 aaKnown RBP24.96■■□□□ 1.59
YBX1-203ENST00000436427 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.96■■□□□ 1.59
YBX1-203ENST00000436427 ZNF112Q9UJU3 913 aa24.96■■□□□ 1.59
YBX1-203ENST00000436427 MTMR7Q9Y216 660 aa24.96■■□□□ 1.59
YBX1-203ENST00000436427 EEF2P13639 858 aaKnown RBP24.95■■□□□ 1.58
YBX1-203ENST00000436427 KLRG1Q96E93 195 aa24.95■■□□□ 1.58
YBX1-203ENST00000436427 GPBP1L1Q9HC44 474 aaPredicted RBP24.95■■□□□ 1.58
YBX1-203ENST00000436427 NYAP2Q9P242 653 aa24.95■■□□□ 1.58
YBX1-203ENST00000436427 ATAD5Q96QE3 1844 aa24.95■■□□□ 1.58
YBX1-203ENST00000436427 CALM1P0DP23 149 aa24.94■■□□□ 1.58
YBX1-203ENST00000436427 CALM2P0DP24 149 aa24.94■■□□□ 1.58
YBX1-203ENST00000436427 CALM3P0DP25 149 aa24.94■■□□□ 1.58
YBX1-203ENST00000436427 RCAN1P53805 252 aa24.94■■□□□ 1.58
YBX1-203ENST00000436427 TROAPQ12815 778 aa24.94■■□□□ 1.58
YBX1-203ENST00000436427 ZKSCAN4Q969J2 545 aaPredicted RBP24.94■■□□□ 1.58
YBX1-203ENST00000436427 TRAF5O00463 557 aa24.93■■□□□ 1.58
YBX1-203ENST00000436427 USP2O75604 605 aaPredicted RBP24.93■■□□□ 1.58
YBX1-203ENST00000436427 TTLL12Q14166 644 aaPredicted RBP24.93■■□□□ 1.58
YBX1-203ENST00000436427 CHMP4CQ96CF2 233 aa24.93■■□□□ 1.58
YBX1-203ENST00000436427 INTS4Q96HW7 963 aaKnown RBP24.93■■□□□ 1.58
YBX1-203ENST00000436427 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.93■■□□□ 1.58
YBX1-203ENST00000436427 DHX16O60231 1041 aaKnown RBP24.92■■□□□ 1.58
YBX1-203ENST00000436427 RTN1Q16799 776 aa24.92■■□□□ 1.58
YBX1-203ENST00000436427 SCYL3Q8IZE3 742 aa24.92■■□□□ 1.58
YBX1-203ENST00000436427 FANCBQ8NB91 859 aa24.92■■□□□ 1.58
YBX1-203ENST00000436427 ARHGEF10LQ9HCE6 1279 aa24.92■■□□□ 1.58
YBX1-203ENST00000436427 GINM1Q9NU53 330 aa24.92■■□□□ 1.58
YBX1-203ENST00000436427 MYH4Q9Y623 1939 aa24.92■■□□□ 1.58
YBX1-203ENST00000436427 CPLX1O14810 134 aa24.91■■□□□ 1.58
YBX1-203ENST00000436427 IREB2P48200 963 aaKnown RBP24.91■■□□□ 1.58
YBX1-203ENST00000436427 SIAH1Q8IUQ4 282 aa24.91■■□□□ 1.58
YBX1-203ENST00000436427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.91■■□□□ 1.58
YBX1-203ENST00000436427 CTCFLQ8NI51 663 aaPredicted RBP24.91■■□□□ 1.58
YBX1-203ENST00000436427 ZNF408Q9H9D4 720 aa24.91■■□□□ 1.58
YBX1-203ENST00000436427 PICK1Q9NRD5 415 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms