RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 NRBP1Q9UHY1 535 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 GGA1Q9UJY5 639 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 BIN1O00499 593 aa19.19■□□□□ 0.66
LIMK1-203ENST00000435201 IKBKBO14920 756 aa19.19■□□□□ 0.66
LIMK1-203ENST00000435201 BBOX1O75936 387 aa19.19■□□□□ 0.66
LIMK1-203ENST00000435201 UFL1O94874 794 aa19.19■□□□□ 0.66
LIMK1-203ENST00000435201 BMP15O95972 392 aa19.19■□□□□ 0.66
LIMK1-203ENST00000435201 HSPA1LP34931 641 aa19.19■□□□□ 0.66
LIMK1-203ENST00000435201 SH3RF3Q8TEJ3 882 aaPredicted RBP19.19■□□□□ 0.66
LIMK1-203ENST00000435201 SHISA4Q96DD7 197 aa19.19■□□□□ 0.66
LIMK1-203ENST00000435201 TRIM75PA6NK02 468 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 NMT2O60551 498 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 IL1R1P14778 569 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 DGKHQ86XP1 1220 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 C17orf53Q8N3J3 647 aaPredicted RBP19.18■□□□□ 0.66
LIMK1-203ENST00000435201 ANKS1AQ92625 1134 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 CD209Q9NNX6 404 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 LRRC37AA6NMS7 1700 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 HOXA10P31260 410 aaPredicted RBP19.18■□□□□ 0.66
LIMK1-203ENST00000435201 LONRF3Q496Y0 759 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 METTL16Q86W50 562 aaKnown RBP19.18■□□□□ 0.66
LIMK1-203ENST00000435201 SRBD1Q8N5C6 995 aaKnown RBP19.18■□□□□ 0.66
LIMK1-203ENST00000435201 KAT14Q9H8E8 782 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 PODXL2Q9NZ53 605 aa19.18■□□□□ 0.66
LIMK1-203ENST00000435201 PNOCQ13519 176 aa19.17■□□□□ 0.66
LIMK1-203ENST00000435201 DIXDC1Q155Q3 683 aa19.17■□□□□ 0.66
LIMK1-203ENST00000435201 CCDC144BQ3MJ40 725 aa19.17■□□□□ 0.66
LIMK1-203ENST00000435201 RCSD1Q6JBY9 416 aa19.17■□□□□ 0.66
LIMK1-203ENST00000435201 SLC51AQ86UW1 340 aa19.17■□□□□ 0.66
LIMK1-203ENST00000435201 PRIMPOLQ96LW4 560 aa19.17■□□□□ 0.66
LIMK1-203ENST00000435201 CDK5RAP2Q96SN8 1893 aa19.17■□□□□ 0.66
LIMK1-203ENST00000435201 TFAP4Q01664 338 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 KANK3Q6NY19 840 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 TMC4Q7Z404 712 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 GPR101Q96P66 508 aaPredicted RBP19.16■□□□□ 0.66
LIMK1-203ENST00000435201 CRAMP1Q96RY5 1269 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 RTFDC1Q9BY42 306 aaPredicted RBP19.16■□□□□ 0.66
LIMK1-203ENST00000435201 QTRT2Q9H974 415 aaKnown RBP19.16■□□□□ 0.66
LIMK1-203ENST00000435201 TCP11L1Q9NUJ3 509 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 SCG2P13521 617 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 NCAPHQ15003 741 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 PFKFB3Q16875 520 aaPredicted RBP19.16■□□□□ 0.66
LIMK1-203ENST00000435201 OLFM4Q6UX06 510 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 TNFRSF25Q93038 417 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 MKNK2Q9HBH9 465 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 ZNF287Q9HBT7 754 aa19.16■□□□□ 0.66
LIMK1-203ENST00000435201 BRWD3Q6RI45 1802 aa19.15■□□□□ 0.66
LIMK1-203ENST00000435201 LTBP1Q14766 1721 aa19.15■□□□□ 0.66
LIMK1-203ENST00000435201 DDX60LQ5H9U9 1706 aaKnown RBP19.15■□□□□ 0.66
LIMK1-203ENST00000435201 hCG_1642624A0A1W2PR95 340 aa19.15■□□□□ 0.66
LIMK1-203ENST00000435201 PLCG2P16885 1265 aa19.15■□□□□ 0.66
LIMK1-203ENST00000435201 LRMPQ12912 555 aa19.15■□□□□ 0.66
LIMK1-203ENST00000435201 GRIK5Q16478 980 aa19.15■□□□□ 0.66
LIMK1-203ENST00000435201 SLF2Q8IX21 1173 aa19.15■□□□□ 0.66
LIMK1-203ENST00000435201 CACTINQ8WUQ7 758 aaKnown RBP19.15■□□□□ 0.66
LIMK1-203ENST00000435201 FERMT2Q96AC1 680 aa19.15■□□□□ 0.66
LIMK1-203ENST00000435201 IMPACTQ9P2X3 320 aa19.15■□□□□ 0.66
LIMK1-203ENST00000435201 UQCRHLA0A096LP55 91 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 KLRG2A4D1S0 409 aaPredicted RBP19.14■□□□□ 0.65
LIMK1-203ENST00000435201 MYO1BO43795 1136 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 UQCRHP07919 91 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 ATP2B1P20020 1258 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 GSDMDP57764 484 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 MDM2Q00987 491 aaPredicted RBP19.14■□□□□ 0.65
LIMK1-203ENST00000435201 GRIN1Q05586 938 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 SPECC1Q5M775 1068 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 KRT27Q7Z3Y8 459 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 LRRC8AQ8IWT6 810 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 TBC1D22AQ8WUA7 517 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 TGFBRAP1Q8WUH2 860 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 CCDC34Q96HJ3 373 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 GPR75-ASB3A0A0A6YYF3 556 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 POLRMTO00411 1230 aaKnown RBP19.14■□□□□ 0.65
LIMK1-203ENST00000435201 POLR2DO15514 142 aaKnown RBP19.14■□□□□ 0.65
LIMK1-203ENST00000435201 BTDP43251 543 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 TRAPPC10P48553 1259 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 GNAQP50148 359 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 MYL5Q02045 173 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 DDR1Q08345 913 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 DHX8Q14562 1220 aaKnown RBP19.14■□□□□ 0.65
LIMK1-203ENST00000435201 POSTNQ15063 836 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 NPY5RQ15761 445 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 ZNF444Q8N0Y2 327 aaPredicted RBP19.14■□□□□ 0.65
LIMK1-203ENST00000435201 PNMA1Q8ND90 353 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 CSRNP2Q9H175 543 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 IL17RBQ9NRM6 502 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 PCDHA5Q9Y5H7 936 aa19.14■□□□□ 0.65
LIMK1-203ENST00000435201 FAM205CA6NFA0 338 aa19.13■□□□□ 0.65
LIMK1-203ENST00000435201 TSPY3P0CV98 308 aa19.13■□□□□ 0.65
LIMK1-203ENST00000435201 TSPY8P0CW00 308 aa19.13■□□□□ 0.65
LIMK1-203ENST00000435201 GRM4Q14833 912 aa19.13■□□□□ 0.65
LIMK1-203ENST00000435201 NT5DC1Q5TFE4 455 aa19.13■□□□□ 0.65
LIMK1-203ENST00000435201 TBC1D16Q8TBP0 767 aa19.13■□□□□ 0.65
LIMK1-203ENST00000435201 DYNLL2Q96FJ2 89 aa19.13■□□□□ 0.65
LIMK1-203ENST00000435201 SH3GLB2Q9NR46 395 aa19.13■□□□□ 0.65
LIMK1-203ENST00000435201 CALML3P27482 149 aa19.12■□□□□ 0.65
LIMK1-203ENST00000435201 NLRP5P59047 1200 aa19.12■□□□□ 0.65
LIMK1-203ENST00000435201 SLC4A8Q2Y0W8 1093 aa19.12■□□□□ 0.65
LIMK1-203ENST00000435201 EARS2Q5JPH6 523 aaKnown RBP19.12■□□□□ 0.65
LIMK1-203ENST00000435201 TTC38Q5R3I4 469 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms