RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
PCOTH-203ENST00000435039 ADARB2Q9NS39 739 aaKnown RBP13.27□□□□□ -0.29
PCOTH-203ENST00000435039 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
PCOTH-203ENST00000435039 CHMP5Q9NZZ3 219 aa13.27□□□□□ -0.29
PCOTH-203ENST00000435039 NAP1L2Q9ULW6 460 aaPredicted RBP13.27□□□□□ -0.29
PCOTH-203ENST00000435039 HPS5Q9UPZ3 1129 aa13.27□□□□□ -0.29
PCOTH-203ENST00000435039 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.29
PCOTH-203ENST00000435039 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
PCOTH-203ENST00000435039 ATAD5Q96QE3 1844 aa13.27□□□□□ -0.29
PCOTH-203ENST00000435039 IGKV6D-41A0A0C4DH26 115 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 GOLGA8AA7E2F4 631 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 FOXN1O15353 648 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 CALM1P0DP23 149 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 CALM2P0DP24 149 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 CALM3P0DP25 149 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 NOVP48745 357 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 HMGN5P82970 282 aaKnown RBP13.26□□□□□ -0.29
PCOTH-203ENST00000435039 TATDN1Q6P1N9 297 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 CATIPQ7Z7H3 387 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 MICU3Q86XE3 530 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 TRPM7Q96QT4 1865 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 SENP2Q9HC62 589 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 PPP2R3BQ9Y5P8 575 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 MYH4Q9Y623 1939 aa13.26□□□□□ -0.29
PCOTH-203ENST00000435039 TBC1D12O60347 775 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 CDKL5O76039 1030 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 AKR1B1P15121 316 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 VEGFBP49765 207 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 RBM26Q5T8P6 1007 aaKnown RBP13.25□□□□□ -0.29
PCOTH-203ENST00000435039 MAP1SQ66K74 1059 aaPredicted RBP13.25□□□□□ -0.29
PCOTH-203ENST00000435039 RCSD1Q6JBY9 416 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 NSUN7Q8NE18 718 aaKnown RBP13.25□□□□□ -0.29
PCOTH-203ENST00000435039 SMARCC2Q8TAQ2 1214 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 TMEM39BQ9GZU3 492 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 PGAP2Q9UHJ9 254 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 DOCK1Q14185 1865 aa13.25□□□□□ -0.29
PCOTH-203ENST00000435039 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 PTPDC1A2A3K4 754 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 NMT2O60551 498 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
PCOTH-203ENST00000435039 GJB2P29033 226 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 EPS15P42566 896 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 CCT2P78371 535 aaKnown RBP13.24□□□□□ -0.29
PCOTH-203ENST00000435039 NUCB2P80303 420 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 RASA3Q14644 834 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 RTN1Q16799 776 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
PCOTH-203ENST00000435039 CEP95Q96GE4 821 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 MAP3K14Q99558 947 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCOTH-203ENST00000435039 KAT14Q9H8E8 782 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 NCOA5Q9HCD5 579 aaKnown RBP13.24□□□□□ -0.29
PCOTH-203ENST00000435039 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
PCOTH-203ENST00000435039 GGA3Q9NZ52 723 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 KIF3AQ9Y496 699 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 PAPPA2Q9BXP8 1791 aa13.24□□□□□ -0.29
PCOTH-203ENST00000435039 ASTN2O75129 1339 aaPredicted RBP13.23□□□□□ -0.29
PCOTH-203ENST00000435039 CPLX1O14810 134 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 PDCP20941 246 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 MAP3K10Q02779 954 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 TROAPQ12815 778 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 CERKLQ49MI3 558 aaPredicted RBP13.23□□□□□ -0.29
PCOTH-203ENST00000435039 ANGEL2Q5VTE6 544 aaKnown RBP13.23□□□□□ -0.29
PCOTH-203ENST00000435039 TMEM179Q6ZVK1 233 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 PNMA1Q8ND90 353 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 HOOK2Q96ED9 719 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 TEPSINQ96N21 525 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.23□□□□□ -0.29
PCOTH-203ENST00000435039 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
PCOTH-203ENST00000435039 MYH6P13533 1939 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 RASSF10A6NK89 507 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 FAM196BA6NMK8 535 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 JAK2O60674 1132 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 CTDNEP1O95476 244 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 TTLL1O95922 423 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
PCOTH-203ENST00000435039 RAB3GAP1Q15042 981 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 USP50Q70EL3 339 aaPredicted RBP13.22□□□□□ -0.29
PCOTH-203ENST00000435039 CDAN1Q8IWY9 1227 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 MYL10Q9BUA6 226 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 DEFB129Q9H1M3 183 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 PRDM10Q9NQV6 1147 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 WBP1LQ9NX94 342 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 SSC5DA1L4H1 1573 aa13.22□□□□□ -0.29
PCOTH-203ENST00000435039 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 MPHOSPH10O00566 681 aaKnown RBP13.21□□□□□ -0.29
PCOTH-203ENST00000435039 IFNAR1P17181 557 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 RXRAP19793 462 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 CDC27P30260 824 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 KIF5BP33176 963 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 HIRAP54198 1017 aaPredicted RBP13.21□□□□□ -0.29
PCOTH-203ENST00000435039 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 DEFB115Q30KQ5 88 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 FANCBQ8NB91 859 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms