RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 TSPY3P0CV98 308 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 TSPY8P0CW00 308 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 GUCY1A2P33402 732 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 BACE1P56817 501 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 CCL15Q16663 113 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 SHROOM1Q2M3G4 852 aaPredicted RBP17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 SH3D19Q5HYK7 790 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 NEDD1Q8NHV4 660 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 BEGAINQ9BUH8 593 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 SH2D4AQ9H788 454 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 CNNM2Q9H8M5 875 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 ARHGEF10LQ9HCE6 1279 aa17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 ZCCHC17Q9NP64 241 aaKnown RBP17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 RBM8AQ9Y5S9 174 aaKnown RBP17.43■□□□□ 0.38
TNFAIP3-204ENST00000433680 TSPY2A6NKD2 308 aa17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 CA12O43570 354 aa17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 USP14P54578 494 aa17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 TFAP4Q01664 338 aa17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 CCDC84Q86UT8 332 aaPredicted RBP17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 PROCA1Q8NCQ7 364 aaPredicted RBP17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 BRI3BPQ8WY22 251 aa17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 NBPF3Q9H094 633 aa17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 KIAA1683Q9H0B3 1180 aa17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 TOMM22Q9NS69 142 aa17.42■□□□□ 0.38
TNFAIP3-204ENST00000433680 LOC285556D6RIA3 1793 aa17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 RANBP6O60518 1105 aaKnown RBP17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 CYP21A2P08686 494 aa17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 ICA1Q05084 483 aa17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 ANKRD23Q86SG2 305 aa17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 IFNL1Q8IU54 200 aa17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 ESR2Q92731 530 aa17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 KRT23Q9C075 422 aa17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 WBP1LQ9NX94 342 aa17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 SAGE1Q9NXZ1 904 aa17.41■□□□□ 0.38
TNFAIP3-204ENST00000433680 IGKV6D-41A0A0C4DH26 115 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 TRDNQ13061 729 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 MTMR2Q13614 643 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 NECTIN1Q15223 517 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 RRP12Q5JTH9 1297 aaKnown RBP17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 USP17L2Q6R6M4 530 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 FEZ1Q99689 392 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 PTPN18Q99952 460 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 INCENPQ9NQS7 918 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 TMOD4Q9NZQ9 345 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 NYAP2Q9P242 653 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 SYNPO2Q9UMS6 1093 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 SLC45A1Q9Y2W3 748 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 TMX2Q9Y320 296 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 TACC3Q9Y6A5 838 aa17.4■□□□□ 0.38
TNFAIP3-204ENST00000433680 IGF2BP3O00425 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
TNFAIP3-204ENST00000433680 PABPC4Q13310 644 aaKnown RBP eCLIP17.39■□□□□ 0.37
TNFAIP3-204ENST00000433680 MOGSQ13724 837 aa17.39■□□□□ 0.37
TNFAIP3-204ENST00000433680 FAM47AQ5JRC9 791 aa17.39■□□□□ 0.37
TNFAIP3-204ENST00000433680 GADL1Q6ZQY3 521 aa17.39■□□□□ 0.37
TNFAIP3-204ENST00000433680 C12orf42Q96LP6 360 aa17.39■□□□□ 0.37
TNFAIP3-204ENST00000433680 CFHR5Q9BXR6 569 aa17.39■□□□□ 0.37
TNFAIP3-204ENST00000433680 TCP11L1Q9NUJ3 509 aa17.39■□□□□ 0.37
TNFAIP3-204ENST00000433680 MTMR4Q9NYA4 1195 aa17.39■□□□□ 0.37
TNFAIP3-204ENST00000433680 BTBD19C9JJ37 291 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 TTLL1O95922 423 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 EEF2P13639 858 aaKnown RBP17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 HMGCS2P54868 508 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 CCDC178Q5BJE1 867 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 CREB3L3Q68CJ9 461 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 SIAH1Q8IUQ4 282 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 ACER1Q8TDN7 264 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 MKL1Q969V6 931 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 CEP95Q96GE4 821 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 RNF186Q9NXI6 227 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 AGTPBP1Q9UPW5 1226 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 NEDD4P46934 1319 aa17.38■□□□□ 0.37
TNFAIP3-204ENST00000433680 A0A1W2PRG0 241 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 E7EWF7 191 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 SLC27A2O14975 620 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 GPAT2Q6NUI2 795 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 IQCA1Q86XH1 822 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 FAM43AQ8N2R8 423 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 NCOA7Q8NI08 942 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 LPAR1Q92633 364 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 TTC14Q96N46 770 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 GOPCQ9HD26 462 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 MYH4Q9Y623 1939 aa17.37■□□□□ 0.37
TNFAIP3-204ENST00000433680 PCNTO95613 3336 aa17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 PDHXO00330 501 aa17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 KDM4AO75164 1064 aa17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 ZKSCAN1P17029 563 aaPredicted RBP17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 NOVP48745 357 aa17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 ATP2B2Q01814 1243 aa17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 RALYLQ86SE5 291 aaKnown RBP17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 IL17RBQ9NRM6 502 aa17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 CLIP2Q9UDT6 1046 aa17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 PNMA3Q9UL41 463 aa17.36■□□□□ 0.37
TNFAIP3-204ENST00000433680 B4E1Z4 1266 aa17.35■□□□□ 0.37
TNFAIP3-204ENST00000433680 TRPA1O75762 1119 aa17.35■□□□□ 0.37
TNFAIP3-204ENST00000433680 HOXA7P31268 230 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms