RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ZMYND8Q9ULU4 1186 aaPredicted RBP18.12■□□□□ 0.49
PRKDC-203ENST00000432581 RLBP1P12271 317 aa18.11■□□□□ 0.49
PRKDC-203ENST00000432581 RAB3GAP1Q15042 981 aa18.11■□□□□ 0.49
PRKDC-203ENST00000432581 CERKLQ49MI3 558 aaPredicted RBP18.11■□□□□ 0.49
PRKDC-203ENST00000432581 KIAA1683Q9H0B3 1180 aa18.11■□□□□ 0.49
PRKDC-203ENST00000432581 CABP5Q9NP86 173 aa18.11■□□□□ 0.49
PRKDC-203ENST00000432581 FOCADQ5VW36 1801 aa18.11■□□□□ 0.49
PRKDC-203ENST00000432581 PLXNB2O15031 1838 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 MAP2K5Q13163 448 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 ZYXQ15942 572 aaKnown RBP18.1■□□□□ 0.49
PRKDC-203ENST00000432581 ABCB5Q2M3G0 1257 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 GPR153Q6NV75 609 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 POTEEQ6S8J3 1075 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 LBX2Q6XYB7 198 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 CATSPERGQ6ZRH7 1159 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 AACSQ86V21 672 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 LRCH3Q96II8 777 aa18.1■□□□□ 0.49
PRKDC-203ENST00000432581 PFASO15067 1338 aa18.09■□□□□ 0.49
PRKDC-203ENST00000432581 COL6A1P12109 1028 aa18.09■□□□□ 0.49
PRKDC-203ENST00000432581 VCAM1P19320 739 aa18.09■□□□□ 0.49
PRKDC-203ENST00000432581 TTF1Q15361 905 aaPredicted RBP18.09■□□□□ 0.49
PRKDC-203ENST00000432581 CCL14Q16627 93 aa18.09■□□□□ 0.49
PRKDC-203ENST00000432581 LHX8Q68G74 356 aa18.09■□□□□ 0.49
PRKDC-203ENST00000432581 EDC3Q96F86 508 aaKnown RBP18.09■□□□□ 0.49
PRKDC-203ENST00000432581 ANTXR1Q9H6X2 564 aa18.09■□□□□ 0.49
PRKDC-203ENST00000432581 NDUFB9Q9Y6M9 179 aa18.09■□□□□ 0.49
PRKDC-203ENST00000432581 CDK5RAP2Q96SN8 1893 aa18.08■□□□□ 0.49
PRKDC-203ENST00000432581 SLC15A5A6NIM6 579 aa18.08■□□□□ 0.48
PRKDC-203ENST00000432581 CNMDO75829 334 aa18.08■□□□□ 0.48
PRKDC-203ENST00000432581 SYN1P17600 705 aa18.08■□□□□ 0.48
PRKDC-203ENST00000432581 CCND3P30281 292 aaPredicted RBP18.08■□□□□ 0.48
PRKDC-203ENST00000432581 MAGEA10P43363 369 aaPredicted RBP18.08■□□□□ 0.48
PRKDC-203ENST00000432581 HSP90AB4PQ58FF6 505 aa18.08■□□□□ 0.48
PRKDC-203ENST00000432581 MFSD14CQ5VZR4 134 aa18.08■□□□□ 0.48
PRKDC-203ENST00000432581 RIOK1Q9BRS2 568 aaKnown RBP18.08■□□□□ 0.48
PRKDC-203ENST00000432581 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.48
PRKDC-203ENST00000432581 DDX60LQ5H9U9 1706 aaKnown RBP18.07■□□□□ 0.48
PRKDC-203ENST00000432581 MAGEB6P1A0A0J9YX57 407 aa18.07■□□□□ 0.48
PRKDC-203ENST00000432581 POLR3DP05423 398 aaPredicted RBP18.07■□□□□ 0.48
PRKDC-203ENST00000432581 SHMT1P34896 483 aa18.07■□□□□ 0.48
PRKDC-203ENST00000432581 PLCD1P51178 756 aa18.07■□□□□ 0.48
PRKDC-203ENST00000432581 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
PRKDC-203ENST00000432581 LRIT3Q3SXY7 679 aa18.07■□□□□ 0.48
PRKDC-203ENST00000432581 WDR78Q5VTH9 848 aa18.07■□□□□ 0.48
PRKDC-203ENST00000432581 ACER1Q8TDN7 264 aa18.07■□□□□ 0.48
PRKDC-203ENST00000432581 IVNS1ABPQ9Y6Y0 642 aa18.07■□□□□ 0.48
PRKDC-203ENST00000432581 ALPK3Q96L96 1907 aa18.07■□□□□ 0.48
PRKDC-203ENST00000432581 PTPREP23469 700 aa18.06■□□□□ 0.48
PRKDC-203ENST00000432581 TDHQ8IZJ6 230 aa18.06■□□□□ 0.48
PRKDC-203ENST00000432581 CRNKL1Q9BZJ0 848 aaKnown RBP18.06■□□□□ 0.48
PRKDC-203ENST00000432581 RPAP3Q9H6T3 665 aaPredicted RBP18.06■□□□□ 0.48
PRKDC-203ENST00000432581 SPDYE16A6NNV3 312 aaPredicted RBP18.05■□□□□ 0.48
PRKDC-203ENST00000432581 MSCO60682 206 aa18.05■□□□□ 0.48
PRKDC-203ENST00000432581 HOXC6P09630 235 aa18.05■□□□□ 0.48
PRKDC-203ENST00000432581 GABPAQ06546 454 aa18.05■□□□□ 0.48
PRKDC-203ENST00000432581 GRB14Q14449 540 aa18.05■□□□□ 0.48
PRKDC-203ENST00000432581 SLC9C2Q5TAH2 1124 aa18.05■□□□□ 0.48
PRKDC-203ENST00000432581 SLC17A8Q8NDX2 589 aa18.05■□□□□ 0.48
PRKDC-203ENST00000432581 UBE2OQ9C0C9 1292 aaKnown RBP18.05■□□□□ 0.48
PRKDC-203ENST00000432581 BTBD7Q9P203 1132 aa18.05■□□□□ 0.48
PRKDC-203ENST00000432581 PDE6AP16499 860 aa18.04■□□□□ 0.48
PRKDC-203ENST00000432581 GUCY1A2P33402 732 aa18.04■□□□□ 0.48
PRKDC-203ENST00000432581 ATP2B2Q01814 1243 aa18.04■□□□□ 0.48
PRKDC-203ENST00000432581 RHPN1Q8TCX5 695 aa18.04■□□□□ 0.48
PRKDC-203ENST00000432581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.04■□□□□ 0.48
PRKDC-203ENST00000432581 IL1RAPL2Q9NP60 686 aa18.04■□□□□ 0.48
PRKDC-203ENST00000432581 MCM9Q9NXL9 1143 aa18.04■□□□□ 0.48
PRKDC-203ENST00000432581 MYO5AQ9Y4I1 1855 aaKnown RBP18.03■□□□□ 0.48
PRKDC-203ENST00000432581 SEPT2Q15019 361 aa18.03■□□□□ 0.48
PRKDC-203ENST00000432581 LRRC26Q2I0M4 334 aa18.03■□□□□ 0.48
PRKDC-203ENST00000432581 CLASRPQ8N2M8 674 aaKnown RBP18.03■□□□□ 0.48
PRKDC-203ENST00000432581 HOXC10Q9NYD6 342 aa18.03■□□□□ 0.48
PRKDC-203ENST00000432581 FLRT1Q9NZU1 646 aa18.03■□□□□ 0.48
PRKDC-203ENST00000432581 DDX20Q9UHI6 824 aaKnown RBP18.03■□□□□ 0.48
PRKDC-203ENST00000432581 MYH1P12882 1939 aa18.03■□□□□ 0.48
PRKDC-203ENST00000432581 MPHOSPH10O00566 681 aaKnown RBP18.02■□□□□ 0.48
PRKDC-203ENST00000432581 COG2Q14746 738 aa18.02■□□□□ 0.48
PRKDC-203ENST00000432581 DEFB123Q8N688 67 aa18.02■□□□□ 0.48
PRKDC-203ENST00000432581 KIF1BPQ96EK5 621 aa18.02■□□□□ 0.48
PRKDC-203ENST00000432581 ZNF532Q9HCE3 1301 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 STRNO43815 780 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 MS4A1P11836 297 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 CNGA1P29973 690 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 TMEM179Q6ZVK1 233 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 MB21D1Q8N884 522 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 NPLOC4Q8TAT6 608 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 PANK1Q8TE04 598 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 LPAR1Q92633 364 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 TANGO6Q9C0B7 1094 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 DCP1AQ9NPI6 582 aaPredicted RBP18.01■□□□□ 0.47
PRKDC-203ENST00000432581 SWAP70Q9UH65 585 aa18.01■□□□□ 0.47
PRKDC-203ENST00000432581 A0A1W2PRG0 241 aa18■□□□□ 0.47
PRKDC-203ENST00000432581 DNM1LO00429 736 aa18■□□□□ 0.47
PRKDC-203ENST00000432581 GOLIM4O00461 696 aa18■□□□□ 0.47
PRKDC-203ENST00000432581 HMMRO75330 724 aa18■□□□□ 0.47
PRKDC-203ENST00000432581 IFIT2P09913 472 aaKnown RBP18■□□□□ 0.47
PRKDC-203ENST00000432581 OLFML2BQ68BL8 750 aa18■□□□□ 0.47
PRKDC-203ENST00000432581 DPP9Q86TI2 863 aa18■□□□□ 0.47
PRKDC-203ENST00000432581 RPAP2Q8IXW5 612 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms