RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 NFIXQ14938 502 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 SHC4Q6S5L8 630 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 CPVLQ9H3G5 476 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 KCNF1Q9H3M0 494 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 RBM17Q96I25 401 aaKnown RBP12.98□□□□□ -0.33
CLDN4-202ENST00000431918 UIMC1Q96RL1 719 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 RNF26Q9BY78 433 aaPredicted RBP12.98□□□□□ -0.33
CLDN4-202ENST00000431918 PPP6R2O75170 966 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 SERPINB2P05120 415 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 CASP1P29466 404 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 STAT6P42226 847 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 LRRC8AQ8IWT6 810 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 NSUN4Q96CB9 384 aaKnown RBP12.98□□□□□ -0.33
CLDN4-202ENST00000431918 ATP8A2Q9NTI2 1148 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 BTDP43251 543 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 IRX3P78415 501 aaPredicted RBP12.98□□□□□ -0.33
CLDN4-202ENST00000431918 MSL1Q68DK7 614 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 PDCL2Q8N4E4 241 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 ENGASEQ8NFI3 743 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 SH3RF3Q8TEJ3 882 aaPredicted RBP12.98□□□□□ -0.33
CLDN4-202ENST00000431918 EPSTI1Q96J88 318 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 ZHX3Q9H4I2 956 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 SALL1Q9NSC2 1324 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 PTGDRQ13258 359 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
CLDN4-202ENST00000431918 PARP4Q9UKK3 1724 aaKnown RBP12.97□□□□□ -0.33
CLDN4-202ENST00000431918 URI1O94763 535 aaPredicted RBP12.97□□□□□ -0.33
CLDN4-202ENST00000431918 GRIN1Q05586 938 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 IQCB1Q15051 598 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 SCG2P13521 617 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 CALML3P27482 149 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 GNAQP50148 359 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 MRFAP1L1Q96HT8 127 aa12.97□□□□□ -0.33
CLDN4-202ENST00000431918 SCNN1DP51172 638 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 EVCP57679 992 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 RBM6P78332 1123 aaKnown RBP12.96□□□□□ -0.33
CLDN4-202ENST00000431918 SMYD4Q8IYR2 804 aaPredicted RBP12.96□□□□□ -0.33
CLDN4-202ENST00000431918 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 MAGEC2Q9UBF1 373 aaPredicted RBP12.96□□□□□ -0.33
CLDN4-202ENST00000431918 XDHP47989 1333 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 STRCP1A6NGW2 1772 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 SEMA3EO15041 775 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 BMP15O95972 392 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 VPS72Q15906 364 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 SYMPKQ92797 1274 aaKnown RBP12.96□□□□□ -0.33
CLDN4-202ENST00000431918 EYA3Q99504 573 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 BRIP1Q9BX63 1249 aa12.96□□□□□ -0.33
CLDN4-202ENST00000431918 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
CLDN4-202ENST00000431918 EVX2Q03828 476 aa12.96□□□□□ -0.34
CLDN4-202ENST00000431918 GRAPQ13588 217 aa12.96□□□□□ -0.34
CLDN4-202ENST00000431918 PPP2R5BQ15173 497 aa12.96□□□□□ -0.34
CLDN4-202ENST00000431918 USP49Q70CQ1 688 aa12.96□□□□□ -0.34
CLDN4-202ENST00000431918 GRAPLQ8TC17 118 aaPredicted RBP12.96□□□□□ -0.34
CLDN4-202ENST00000431918 DNAI1Q9UI46 699 aa12.96□□□□□ -0.34
CLDN4-202ENST00000431918 N4BP3O15049 544 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 CCT6AP40227 531 aaKnown RBP12.95□□□□□ -0.34
CLDN4-202ENST00000431918 STIM1Q13586 685 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 AXDND1Q5T1B0 1012 aaPredicted RBP12.95□□□□□ -0.34
CLDN4-202ENST00000431918 JAKMIP3Q5VZ66 844 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 DHX40Q8IX18 779 aaKnown RBP12.95□□□□□ -0.34
CLDN4-202ENST00000431918 IQUBQ8NA54 791 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 MYRIPQ8NFW9 859 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 SYT10Q6XYQ8 523 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 PLA2G4DQ86XP0 818 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 CCDC148Q8NFR7 591 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 ZBTB22O15209 634 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 PARP1P09874 1014 aaKnown RBP12.95□□□□□ -0.34
CLDN4-202ENST00000431918 IDEP14735 1019 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 NTRK3Q16288 839 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 INF2Q27J81 1249 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 DTHD1Q6ZMT9 781 aa12.95□□□□□ -0.34
CLDN4-202ENST00000431918 FAM217BQ9NTX9 383 aaPredicted RBP12.95□□□□□ -0.34
CLDN4-202ENST00000431918 TCP10Q12799 353 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 LEMD3Q9Y2U8 911 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 AFF2P51816 1311 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 COL18A1P39060 1754 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 EEF2KMTQ96G04 330 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 ZFP91Q96JP5 570 aaPredicted RBP12.94□□□□□ -0.34
CLDN4-202ENST00000431918 TMEM51Q9NW97 253 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 ZSCAN20P17040 1043 aaPredicted RBP12.94□□□□□ -0.34
CLDN4-202ENST00000431918 RESP18Q5W5W9 173 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 FBXO33Q7Z6M2 555 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 RIOK1Q9BRS2 568 aaKnown RBP12.94□□□□□ -0.34
CLDN4-202ENST00000431918 CTNND2Q9UQB3 1225 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 FRMPD2Q68DX3 1309 aaPredicted RBP12.94□□□□□ -0.34
CLDN4-202ENST00000431918 KLRF2D3W0D1 207 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 DDAH1O94760 285 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 TMTC3Q6ZXV5 915 aa12.94□□□□□ -0.34
CLDN4-202ENST00000431918 LRRC47Q8N1G4 583 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms