RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 GJB4Q9NTQ9 266 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 FAM205AQ6ZU69 1335 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 BAG3O95817 575 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 MMP1P03956 469 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 LDHBP07195 334 aaKnown RBP14.81□□□□□ -0.04
DDX56-204ENST00000431640 PLCB2Q00722 1185 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 GRIPAP1Q4V328 841 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 IFIT1BQ5T764 474 aaKnown RBP14.81□□□□□ -0.04
DDX56-204ENST00000431640 NBPF11Q86T75 865 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 NUP133Q8WUM0 1156 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 AIFM3Q96NN9 605 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 DCP1AQ9NPI6 582 aaPredicted RBP14.81□□□□□ -0.04
DDX56-204ENST00000431640 AATFQ9NY61 560 aaKnown RBP eCLIP14.81□□□□□ -0.04
DDX56-204ENST00000431640 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.81□□□□□ -0.04
DDX56-204ENST00000431640 GOLGA6L19H0YKK7 550 aa14.8□□□□□ -0.04
DDX56-204ENST00000431640 DDAH1O94760 285 aa14.8□□□□□ -0.04
DDX56-204ENST00000431640 GTF2IP78347 998 aa14.8□□□□□ -0.04
DDX56-204ENST00000431640 ZRSR1Q15695 479 aaKnown RBP14.8□□□□□ -0.04
DDX56-204ENST00000431640 CCDC178Q5BJE1 867 aa14.8□□□□□ -0.04
DDX56-204ENST00000431640 NOSTRINQ8IVI9 506 aa14.8□□□□□ -0.04
DDX56-204ENST00000431640 STK11IPQ8N1F8 1099 aa14.8□□□□□ -0.04
DDX56-204ENST00000431640 NOL10Q9BSC4 688 aaKnown RBP14.8□□□□□ -0.04
DDX56-204ENST00000431640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
DDX56-204ENST00000431640 A0A1B0GVL5 298 aa14.79□□□□□ -0.04
DDX56-204ENST00000431640 PRPF3O43395 683 aaKnown RBP14.79□□□□□ -0.04
DDX56-204ENST00000431640 CUTAO60888 179 aa14.79□□□□□ -0.04
DDX56-204ENST00000431640 NDUFA8P51970 172 aa14.79□□□□□ -0.04
DDX56-204ENST00000431640 PPP4CP60510 307 aa14.79□□□□□ -0.04
DDX56-204ENST00000431640 RILPL1Q5EBL4 403 aa14.79□□□□□ -0.04
DDX56-204ENST00000431640 AXDND1Q5T1B0 1012 aaPredicted RBP14.79□□□□□ -0.04
DDX56-204ENST00000431640 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.79□□□□□ -0.04
DDX56-204ENST00000431640 LUZP1Q86V48 1076 aa14.79□□□□□ -0.04
DDX56-204ENST00000431640 AMOTL1Q8IY63 956 aa14.79□□□□□ -0.04
DDX56-204ENST00000431640 LARGE2Q8N3Y3 721 aa14.79□□□□□ -0.04
DDX56-204ENST00000431640 ENAHQ8N8S7 591 aaPredicted RBP14.79□□□□□ -0.04
DDX56-204ENST00000431640 FAM237AA0A1B0GTK4 181 aa14.78□□□□□ -0.04
DDX56-204ENST00000431640 OFD1O75665 1012 aa14.78□□□□□ -0.04
DDX56-204ENST00000431640 ZNF202O95125 648 aa14.78□□□□□ -0.04
DDX56-204ENST00000431640 PTPAQ15257 358 aa14.78□□□□□ -0.04
DDX56-204ENST00000431640 DACT2Q5SW24 774 aa14.78□□□□□ -0.04
DDX56-204ENST00000431640 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.78□□□□□ -0.04
DDX56-204ENST00000431640 MAP3K14Q99558 947 aa14.78□□□□□ -0.04
DDX56-204ENST00000431640 DNAJC25Q9H1X3 360 aa14.78□□□□□ -0.04
DDX56-204ENST00000431640 CEP131Q9UPN4 1083 aa14.78□□□□□ -0.04
DDX56-204ENST00000431640 PODNQ7Z5L7 613 aa14.77□□□□□ -0.04
DDX56-204ENST00000431640 SLF2Q8IX21 1173 aa14.77□□□□□ -0.04
DDX56-204ENST00000431640 DIS3L2Q8IYB7 885 aaKnown RBP14.77□□□□□ -0.04
DDX56-204ENST00000431640 KIAA1468Q9P260 1216 aa14.77□□□□□ -0.04
DDX56-204ENST00000431640 MYH2Q9UKX2 1941 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 CYP2D7A0A087X1C5 515 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 BECN2A8MW95 431 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 USP5P45974 858 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 IQCB1Q15051 598 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 MFSD14BQ5SR56 506 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 ARHGAP27Q6ZUM4 889 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 ELOA2Q8IYF1 753 aaPredicted RBP14.77□□□□□ -0.05
DDX56-204ENST00000431640 CEP57L1Q8IYX8 460 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 FBXW7Q969H0 707 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 MCM9Q9NXL9 1143 aa14.77□□□□□ -0.05
DDX56-204ENST00000431640 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.77□□□□□ -0.05
DDX56-204ENST00000431640 MORC2Q9Y6X9 1032 aaPredicted RBP14.77□□□□□ -0.05
DDX56-204ENST00000431640 ZNF541Q9H0D2 1346 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 BAZ2AQ9UIF9 1905 aaKnown RBP14.76□□□□□ -0.05
DDX56-204ENST00000431640 CDK5RAP2Q96SN8 1893 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 BTBD18B2RXH4 712 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 AP5Z1O43299 807 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 WDHD1O75717 1129 aaPredicted RBP14.76□□□□□ -0.05
DDX56-204ENST00000431640 RAD17O75943 681 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 GUCY1A2P33402 732 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 SYKP43405 635 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 TROAPQ12815 778 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 DIXDC1Q155Q3 683 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 C12orf60Q5U649 245 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 SARM1Q6SZW1 724 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 CTCFLQ8NI51 663 aaPredicted RBP14.76□□□□□ -0.05
DDX56-204ENST00000431640 BPIFA3Q9BQP9 254 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 TRIM5Q9C035 493 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 VPS33BQ9H267 617 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 ZNF287Q9HBT7 754 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 BRMS1Q9HCU9 246 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 ECM29Q5VYK3 1845 aa14.76□□□□□ -0.05
DDX56-204ENST00000431640 PSMD14O00487 310 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 PFKFB1P16118 471 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 MARCKSP29966 332 aaPredicted RBP14.75□□□□□ -0.05
DDX56-204ENST00000431640 CDC25BP30305 580 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 RESP18Q5W5W9 173 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 PLA2G4DQ86XP0 818 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 DGKHQ86XP1 1220 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 NIM1KQ8IY84 436 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 KRI1Q8N9T8 703 aaKnown RBP14.75□□□□□ -0.05
DDX56-204ENST00000431640 TBC1D22AQ8WUA7 517 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 ANKS1AQ92625 1134 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 MKRN1Q9UHC7 482 aaKnown RBP14.75□□□□□ -0.05
DDX56-204ENST00000431640 HOOK1Q9UJC3 728 aaKnown RBP14.75□□□□□ -0.05
DDX56-204ENST00000431640 HPSEQ9Y251 543 aa14.75□□□□□ -0.05
DDX56-204ENST00000431640 DDX60LQ5H9U9 1706 aaKnown RBP14.74□□□□□ -0.05
DDX56-204ENST00000431640 USP17L3A6NCW0 530 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 USP17L4A6NCW7 530 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 TSPY2A6NKD2 308 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 PRDM1O75626 825 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms