RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 PPARAQ07869 468 aa17.04■□□□□ 0.32
CSNK1E-209ENST00000431632 SIAH1Q8IUQ4 282 aa17.04■□□□□ 0.32
CSNK1E-209ENST00000431632 INCENPQ9NQS7 918 aa17.04■□□□□ 0.32
CSNK1E-209ENST00000431632 EMILIN3Q9NT22 766 aa17.04■□□□□ 0.32
CSNK1E-209ENST00000431632 AGTPBP1Q9UPW5 1226 aa17.04■□□□□ 0.32
CSNK1E-209ENST00000431632 ATAD5Q96QE3 1844 aa17.04■□□□□ 0.32
CSNK1E-209ENST00000431632 CASP8AP2Q9UKL3 1982 aa17.04■□□□□ 0.32
CSNK1E-209ENST00000431632 ROBO3Q96MS0 1386 aa17.03■□□□□ 0.32
CSNK1E-209ENST00000431632 A0A1W2PRG0 241 aa17.03■□□□□ 0.32
CSNK1E-209ENST00000431632 CAPN15O75808 1086 aa17.03■□□□□ 0.32
CSNK1E-209ENST00000431632 USP17L2Q6R6M4 530 aa17.03■□□□□ 0.32
CSNK1E-209ENST00000431632 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.03■□□□□ 0.32
CSNK1E-209ENST00000431632 IL25Q9H293 177 aa17.03■□□□□ 0.32
CSNK1E-209ENST00000431632 TMOD4Q9NZQ9 345 aa17.03■□□□□ 0.32
CSNK1E-209ENST00000431632 SLC45A1Q9Y2W3 748 aa17.03■□□□□ 0.32
CSNK1E-209ENST00000431632 SLC3A2P08195 630 aaKnown RBP17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 ZYXQ15942 572 aaKnown RBP17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 C17orf99Q6UX52 265 aa17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 ZNF444Q8N0Y2 327 aaPredicted RBP17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 KIAA1683Q9H0B3 1180 aa17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 ZNF287Q9HBT7 754 aa17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 CPA4Q9UI42 421 aa17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 ANAPC4Q9UJX5 808 aa17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 TACC3Q9Y6A5 838 aa17.02■□□□□ 0.32
CSNK1E-209ENST00000431632 SP3Q02447 781 aa17.01■□□□□ 0.31
CSNK1E-209ENST00000431632 PDE4BQ07343 736 aa17.01■□□□□ 0.31
CSNK1E-209ENST00000431632 PARK7Q99497 189 aaKnown RBP17.01■□□□□ 0.31
CSNK1E-209ENST00000431632 FEZ1Q99689 392 aa17.01■□□□□ 0.31
CSNK1E-209ENST00000431632 KANSL2Q9H9L4 492 aa17.01■□□□□ 0.31
CSNK1E-209ENST00000431632 USP14P54578 494 aa17■□□□□ 0.31
CSNK1E-209ENST00000431632 FAM47AQ5JRC9 791 aa17■□□□□ 0.31
CSNK1E-209ENST00000431632 RUFY2Q8WXA3 655 aa17■□□□□ 0.31
CSNK1E-209ENST00000431632 PTPRFP10586 1907 aa17■□□□□ 0.31
CSNK1E-209ENST00000431632 ADGRA2Q96PE1 1338 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 EEF2P13639 858 aaKnown RBP16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 HOXA7P31268 230 aaPredicted RBP16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 HAND2P61296 217 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 CAP1Q01518 475 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 TFAP4Q01664 338 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 ATP2B2Q01814 1243 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 ICA1Q05084 483 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 PABPC4Q13310 644 aaKnown RBP eCLIP16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 BMP2KLQ5H9B9 411 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 TNS4Q8IZW8 715 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 CD99L2Q8TCZ2 262 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 C12orf42Q96LP6 360 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 DSCC1Q9BVC3 393 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 ASCC2Q9H1I8 757 aaPredicted RBP16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 ARHGEF10LQ9HCE6 1279 aa16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.99■□□□□ 0.31
CSNK1E-209ENST00000431632 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
CSNK1E-209ENST00000431632 FGRP09769 529 aa16.98■□□□□ 0.31
CSNK1E-209ENST00000431632 OSBPP22059 807 aa16.98■□□□□ 0.31
CSNK1E-209ENST00000431632 KIAA1755Q5JYT7 1200 aa16.98■□□□□ 0.31
CSNK1E-209ENST00000431632 CTU1Q7Z7A3 348 aaKnown RBP16.98■□□□□ 0.31
CSNK1E-209ENST00000431632 NEDD1Q8NHV4 660 aa16.98■□□□□ 0.31
CSNK1E-209ENST00000431632 NBPF3Q9H094 633 aa16.98■□□□□ 0.31
CSNK1E-209ENST00000431632 PNMA3Q9UL41 463 aa16.98■□□□□ 0.31
CSNK1E-209ENST00000431632 TMX2Q9Y320 296 aa16.98■□□□□ 0.31
CSNK1E-209ENST00000431632 IGKV6D-41A0A0C4DH26 115 aa16.97■□□□□ 0.31
CSNK1E-209ENST00000431632 SGSM2O43147 1006 aa16.97■□□□□ 0.31
CSNK1E-209ENST00000431632 BCRP11274 1271 aa16.97■□□□□ 0.31
CSNK1E-209ENST00000431632 SMCR8Q8TEV9 937 aaPredicted RBP16.97■□□□□ 0.31
CSNK1E-209ENST00000431632 ERO1AQ96HE7 468 aa16.97■□□□□ 0.31
CSNK1E-209ENST00000431632 NYAP2Q9P242 653 aa16.97■□□□□ 0.31
CSNK1E-209ENST00000431632 RAD50Q92878 1312 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 USP17L15C9J2P7 530 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 USP17L13C9JLJ4 530 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 USP17L11C9JVI0 530 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 USP17L18D6R9N7 530 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 USP17L22D6RA61 530 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 USP17L17D6RBQ6 530 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 USP17L19D6RCP7 530 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 USP17L20D6RJB6 530 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 ZNF213O14771 459 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 ORC4O43929 436 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 TSPY3P0CV98 308 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 TSPY8P0CW00 308 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 VCAM1P19320 739 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 PTH1RQ03431 593 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 USP17L24Q0WX57 530 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 CATSPERGQ6ZRH7 1159 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 CEP95Q96GE4 821 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 ARHGAP39Q9C0H5 1083 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 MCOLN1Q9GZU1 580 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 RPAP3Q9H6T3 665 aaPredicted RBP16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 MTMR4Q9NYA4 1195 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 CTNNA3Q9UI47 895 aa16.96■□□□□ 0.31
CSNK1E-209ENST00000431632 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-209ENST00000431632 ECM2O94769 699 aaPredicted RBP16.95■□□□□ 0.3
CSNK1E-209ENST00000431632 LACTBP83111 547 aaPredicted RBP16.95■□□□□ 0.3
CSNK1E-209ENST00000431632 AKNAD1Q5T1N1 836 aa16.95■□□□□ 0.3
CSNK1E-209ENST00000431632 MFSD6Q6ZSS7 791 aa16.95■□□□□ 0.3
CSNK1E-209ENST00000431632 OTOP1Q7RTM1 612 aa16.95■□□□□ 0.3
CSNK1E-209ENST00000431632 SPICE1Q8N0Z3 855 aa16.95■□□□□ 0.3
CSNK1E-209ENST00000431632 ANKRD13CQ8N6S4 541 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms