RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 FOXP4Q8IVH2 680 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-206ENST00000431390 ZSCAN29Q8IWY8 852 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-206ENST00000431390 CHMP5Q9NZZ3 219 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 PLIN4Q96Q06 1357 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 CCDC69A6NI79 296 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 TSPY3P0CV98 308 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 TSPY8P0CW00 308 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 RCAN1P53805 252 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 SCRN1Q12765 414 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 KIF4BQ2VIQ3 1234 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 APOA5Q6Q788 366 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 NFXL1Q6ZNB6 911 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 METTL16Q86W50 562 aaKnown RBP21.36■■□□□ 1.01
HMGN1-206ENST00000431390 ENAHQ8N8S7 591 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-206ENST00000431390 HHIPL1Q96JK4 782 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 VEZTQ9HBM0 779 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 GOLGA8BA8MQT2 603 aa21.35■■□□□ 1.01
HMGN1-206ENST00000431390 CDC37L1Q7L3B6 337 aa21.35■■□□□ 1.01
HMGN1-206ENST00000431390 SAMD7Q7Z3H4 446 aa21.35■■□□□ 1.01
HMGN1-206ENST00000431390 NEDD1Q8NHV4 660 aa21.35■■□□□ 1.01
HMGN1-206ENST00000431390 ZC3H15Q8WU90 426 aaKnown RBP21.35■■□□□ 1.01
HMGN1-206ENST00000431390 SENP2Q9HC62 589 aa21.35■■□□□ 1.01
HMGN1-206ENST00000431390 NAP1L2Q9ULW6 460 aaPredicted RBP21.35■■□□□ 1.01
HMGN1-206ENST00000431390 SLC12A7Q9Y666 1083 aa21.35■■□□□ 1.01
HMGN1-206ENST00000431390 NID2Q14112 1375 aa21.34■■□□□ 1.01
HMGN1-206ENST00000431390 CA12O43570 354 aa21.34■■□□□ 1.01
HMGN1-206ENST00000431390 EGFRP00533 1210 aa21.34■■□□□ 1.01
HMGN1-206ENST00000431390 TNNI2P48788 182 aa21.34■■□□□ 1.01
HMGN1-206ENST00000431390 MLLT1Q03111 559 aaPredicted RBP21.34■■□□□ 1.01
HMGN1-206ENST00000431390 TNFAIP1Q13829 316 aa21.34■■□□□ 1.01
HMGN1-206ENST00000431390 IFIT1BQ5T764 474 aaKnown RBP21.34■■□□□ 1.01
HMGN1-206ENST00000431390 RBM26Q5T8P6 1007 aaKnown RBP21.34■■□□□ 1.01
HMGN1-206ENST00000431390 SYNE3Q6ZMZ3 975 aa21.34■■□□□ 1.01
HMGN1-206ENST00000431390 CRACR2BQ8N4Y2 399 aaPredicted RBP21.34■■□□□ 1.01
HMGN1-206ENST00000431390 LLPHQ9BRT6 129 aaKnown RBP21.34■■□□□ 1.01
HMGN1-206ENST00000431390 HPS5Q9UPZ3 1129 aa21.34■■□□□ 1.01
HMGN1-206ENST00000431390 SMC3Q9UQE7 1217 aa21.34■■□□□ 1.01
HMGN1-206ENST00000431390 ZBTB43O43298 467 aa21.33■■□□□ 1.01
HMGN1-206ENST00000431390 DHX16O60231 1041 aaKnown RBP21.33■■□□□ 1.01
HMGN1-206ENST00000431390 SLC34A2O95436 690 aa21.33■■□□□ 1.01
HMGN1-206ENST00000431390 SHMT1P34896 483 aa21.33■■□□□ 1.01
HMGN1-206ENST00000431390 TBC1D10BQ4KMP7 808 aaPredicted RBP21.33■■□□□ 1.01
HMGN1-206ENST00000431390 DGKHQ86XP1 1220 aa21.33■■□□□ 1.01
HMGN1-206ENST00000431390 ANKS1AQ92625 1134 aa21.33■■□□□ 1.01
HMGN1-206ENST00000431390 MCOLN1Q9GZU1 580 aa21.33■■□□□ 1.01
HMGN1-206ENST00000431390 GREB1LQ9C091 1923 aaPredicted RBP21.33■■□□□ 1.01
HMGN1-206ENST00000431390 DLK2Q6UY11 383 aa21.32■■□□□ 1
HMGN1-206ENST00000431390 CCDC17Q96LX7 622 aa21.32■■□□□ 1
HMGN1-206ENST00000431390 CSRNP1Q96S65 589 aa21.32■■□□□ 1
HMGN1-206ENST00000431390 TRIM34Q9BYJ4 488 aa21.32■■□□□ 1
HMGN1-206ENST00000431390 IL17RBQ9NRM6 502 aa21.32■■□□□ 1
HMGN1-206ENST00000431390 HERC5Q9UII4 1024 aaKnown RBP21.32■■□□□ 1
HMGN1-206ENST00000431390 RGS19P49795 217 aa21.31■■□□□ 1
HMGN1-206ENST00000431390 METAP2P50579 478 aaKnown RBP eCLIP21.31■■□□□ 1
HMGN1-206ENST00000431390 CCT2P78371 535 aaKnown RBP21.31■■□□□ 1
HMGN1-206ENST00000431390 DNAJC18Q9H819 358 aa21.31■■□□□ 1
HMGN1-206ENST00000431390 NMT2O60551 498 aa21.31■■□□□ 1
HMGN1-206ENST00000431390 RCSD1Q6JBY9 416 aa21.31■■□□□ 1
HMGN1-206ENST00000431390 TATDN1Q6P1N9 297 aa21.31■■□□□ 1
HMGN1-206ENST00000431390 USP48Q86UV5 1035 aa21.31■■□□□ 1
HMGN1-206ENST00000431390 ZNF654Q8IZM8 581 aa21.31■■□□□ 1
HMGN1-206ENST00000431390 ZIC5Q96T25 663 aa21.31■■□□□ 1
HMGN1-206ENST00000431390 GJB2P29033 226 aa21.3■■□□□ 1
HMGN1-206ENST00000431390 NOVP48745 357 aa21.3■■□□□ 1
HMGN1-206ENST00000431390 NUCB2P80303 420 aa21.3■■□□□ 1
HMGN1-206ENST00000431390 PPP2R5BQ15173 497 aa21.3■■□□□ 1
HMGN1-206ENST00000431390 MICU3Q86XE3 530 aa21.3■■□□□ 1
HMGN1-206ENST00000431390 SMARCC2Q8TAQ2 1214 aa21.3■■□□□ 1
HMGN1-206ENST00000431390 NCOA5Q9HCD5 579 aaKnown RBP21.3■■□□□ 1
HMGN1-206ENST00000431390 GOLGA8AA7E2F4 631 aa21.29■■□□□ 1
HMGN1-206ENST00000431390 TBC1D12O60347 775 aa21.29■■□□□ 1
HMGN1-206ENST00000431390 DDAH1O94760 285 aa21.29■■□□□ 1
HMGN1-206ENST00000431390 CALM1P0DP23 149 aa21.29■■□□□ 1
HMGN1-206ENST00000431390 CALM2P0DP24 149 aa21.29■■□□□ 1
HMGN1-206ENST00000431390 CALM3P0DP25 149 aa21.29■■□□□ 1
HMGN1-206ENST00000431390 HUNKP57058 714 aa21.29■■□□□ 1
HMGN1-206ENST00000431390 HMGN5P82970 282 aaKnown RBP21.29■■□□□ 1
HMGN1-206ENST00000431390 CATIPQ7Z7H3 387 aa21.29■■□□□ 1
HMGN1-206ENST00000431390 NSUN7Q8NE18 718 aaKnown RBP21.29■■□□□ 1
HMGN1-206ENST00000431390 AKR1B1P15121 316 aa21.28■■□□□ 1
HMGN1-206ENST00000431390 NOGQ13253 232 aa21.28■■□□□ 1
HMGN1-206ENST00000431390 DGKZQ13574 1117 aa21.28■■□□□ 1
HMGN1-206ENST00000431390 PPP4R3BQ5MIZ7 849 aa21.28■■□□□ 1
HMGN1-206ENST00000431390 APOBEC3FQ8IUX4 373 aaKnown RBP21.28■■□□□ 1
HMGN1-206ENST00000431390 TMEM39BQ9GZU3 492 aa21.28■■□□□ 1
HMGN1-206ENST00000431390 IGKV6D-41A0A0C4DH26 115 aa21.27■■□□□ 1
HMGN1-206ENST00000431390 CTDNEP1O95476 244 aa21.27■■□□□ 1
HMGN1-206ENST00000431390 PDIA4P13667 645 aaKnown RBP21.27■■□□□ 1
HMGN1-206ENST00000431390 RASA3Q14644 834 aa21.27■■□□□ 1
HMGN1-206ENST00000431390 CERKLQ49MI3 558 aaPredicted RBP21.27■■□□□ 1
HMGN1-206ENST00000431390 CPLX2Q6PUV4 134 aaKnown RBP21.27■■□□□ 1
HMGN1-206ENST00000431390 MYL10Q9BUA6 226 aa21.27■■□□□ 1
HMGN1-206ENST00000431390 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.27■■□□□ 1
HMGN1-206ENST00000431390 KAT14Q9H8E8 782 aa21.27■■□□□ 1
HMGN1-206ENST00000431390 CCDC196A0A1B0GTZ2 297 aa21.27■□□□□ 0.99
HMGN1-206ENST00000431390 CPLX1O14810 134 aa21.27■□□□□ 0.99
HMGN1-206ENST00000431390 CDKL5O76039 1030 aa21.27■□□□□ 0.99
HMGN1-206ENST00000431390 TROAPQ12815 778 aa21.27■□□□□ 0.99
HMGN1-206ENST00000431390 RAB11FIP4Q86YS3 637 aa21.27■□□□□ 0.99
HMGN1-206ENST00000431390 ASTN2O75129 1339 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms