RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 SAFBQ15424 915 aaKnown RBP eCLIP16.06■□□□□ 0.16
RBM39-212ENST00000429968 SBK1Q52WX2 424 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 KRI1Q8N9T8 703 aaKnown RBP16.06■□□□□ 0.16
RBM39-212ENST00000429968 TIGD1Q96MW7 591 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 UQCRHLA0A096LP55 91 aa16.05■□□□□ 0.16
RBM39-212ENST00000429968 PRPF3O43395 683 aaKnown RBP16.05■□□□□ 0.16
RBM39-212ENST00000429968 UQCRHP07919 91 aa16.05■□□□□ 0.16
RBM39-212ENST00000429968 PTPREP23469 700 aa16.05■□□□□ 0.16
RBM39-212ENST00000429968 RASGRP2Q7LDG7 609 aa16.05■□□□□ 0.16
RBM39-212ENST00000429968 GRAMD1CQ8IYS0 662 aa16.05■□□□□ 0.16
RBM39-212ENST00000429968 JMYQ8N9B5 988 aa16.05■□□□□ 0.16
RBM39-212ENST00000429968 ZNF592Q92610 1267 aa16.05■□□□□ 0.16
RBM39-212ENST00000429968 MRFAP1L1Q96HT8 127 aa16.05■□□□□ 0.16
RBM39-212ENST00000429968 ARPP21Q9UBL0 812 aaPredicted RBP16.05■□□□□ 0.16
RBM39-212ENST00000429968 SERPINB2P05120 415 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 LDHBP07195 334 aaKnown RBP16.04■□□□□ 0.16
RBM39-212ENST00000429968 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 CRY2Q49AN0 593 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 KRBA2Q6ZNG9 492 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 MYH1P12882 1939 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 TPM2P07951 284 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 PLCD1P51178 756 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 RBM6P78332 1123 aaKnown RBP16.04■□□□□ 0.16
RBM39-212ENST00000429968 MDM2Q00987 491 aaPredicted RBP16.04■□□□□ 0.16
RBM39-212ENST00000429968 RILPL1Q5EBL4 403 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 DNTTIP2Q5QJE6 756 aaKnown RBP16.04■□□□□ 0.16
RBM39-212ENST00000429968 C12orf60Q5U649 245 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
RBM39-212ENST00000429968 ADAMTSL1Q8N6G6 1762 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 A0A087X0B3 334 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 UFL1O94874 794 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 PCP11498 1178 aaKnown RBP16.03■□□□□ 0.16
RBM39-212ENST00000429968 ATP1A3P13637 1013 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 PDE4BQ07343 736 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 SLC35G1Q2M3R5 365 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 PROM2Q8N271 834 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 BPIFA3Q9BQP9 254 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 LRRC37AA6NMS7 1700 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 USP17L3A6NCW0 530 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 USP17L4A6NCW7 530 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 TSPY2A6NKD2 308 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 DDAH1O94760 285 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 TRIM37O94972 964 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 TPM3P06753 285 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 USP17L1Q7RTZ2 530 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 CERKQ8TCT0 537 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 TGFBRAP1Q8WUH2 860 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
RBM39-212ENST00000429968 ZFP91Q96JP5 570 aaPredicted RBP16.03■□□□□ 0.16
RBM39-212ENST00000429968 RTFDC1Q9BY42 306 aaPredicted RBP16.03■□□□□ 0.16
RBM39-212ENST00000429968 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 POLLQ9UGP5 575 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 SAP30BPQ9UHR5 308 aaKnown RBP16.03■□□□□ 0.16
RBM39-212ENST00000429968 PCDHA5Q9Y5H7 936 aa16.03■□□□□ 0.16
RBM39-212ENST00000429968 FOCADQ5VW36 1801 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 POLR2DO15514 142 aaKnown RBP16.02■□□□□ 0.16
RBM39-212ENST00000429968 USP5P45974 858 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 TFAP4Q01664 338 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 FILIP1Q7Z7B0 1213 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 PDILTQ8N807 584 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 CNNM3Q8NE01 707 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 TSC1Q92574 1164 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 XPO4Q9C0E2 1151 aaKnown RBP16.02■□□□□ 0.16
RBM39-212ENST00000429968 NAT10Q9H0A0 1025 aaKnown RBP16.02■□□□□ 0.16
RBM39-212ENST00000429968 CD209Q9NNX6 404 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 RBM28Q9NW13 759 aaKnown RBP16.02■□□□□ 0.16
RBM39-212ENST00000429968 SERTAD1Q9UHV2 236 aa16.02■□□□□ 0.16
RBM39-212ENST00000429968 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
RBM39-212ENST00000429968 LMOD1P29536 600 aaPredicted RBP16.01■□□□□ 0.15
RBM39-212ENST00000429968 KRT2P35908 639 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 TERF1P54274 439 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 AKAP17AQ02040 695 aaKnown RBP16.01■□□□□ 0.15
RBM39-212ENST00000429968 PPP2R5BQ15173 497 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 PTPN21Q16825 1174 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 MAPKAPK5Q8IW41 473 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 LRRC8AQ8IWT6 810 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 IFNKQ9P0W0 207 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 ADRA2BP18089 450 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 ZNF827Q17R98 1081 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 SPTY2D1Q68D10 685 aaPredicted RBP16.01■□□□□ 0.15
RBM39-212ENST00000429968 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 ZNF804AQ7Z570 1209 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 DPF2Q92785 391 aa16.01■□□□□ 0.15
RBM39-212ENST00000429968 SRPRBQ9Y5M8 271 aaKnown RBP16.01■□□□□ 0.15
RBM39-212ENST00000429968 SNED1Q8TER0 1413 aa16■□□□□ 0.15
RBM39-212ENST00000429968 USP27XA6NNY8 438 aa16■□□□□ 0.15
RBM39-212ENST00000429968 POLRMTO00411 1230 aaKnown RBP16■□□□□ 0.15
RBM39-212ENST00000429968 EPSTI1Q96J88 318 aa16■□□□□ 0.15
RBM39-212ENST00000429968 QTRT2Q9H974 415 aaKnown RBP16■□□□□ 0.15
RBM39-212ENST00000429968 ROBO3Q96MS0 1386 aa16■□□□□ 0.15
RBM39-212ENST00000429968 ACTN4O43707 911 aaKnown RBP16■□□□□ 0.15
RBM39-212ENST00000429968 CALM1P0DP23 149 aa16■□□□□ 0.15
RBM39-212ENST00000429968 CALM2P0DP24 149 aa16■□□□□ 0.15
RBM39-212ENST00000429968 CALM3P0DP25 149 aa16■□□□□ 0.15
RBM39-212ENST00000429968 CASP1P29466 404 aa16■□□□□ 0.15
RBM39-212ENST00000429968 CCZ1BP86790 482 aa16■□□□□ 0.15
RBM39-212ENST00000429968 CCZ1P86791 482 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms