RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 ZNF174Q15697 407 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 UVSSAQ2YD98 709 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 DPCR1Q3MIW9 517 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 DCAF8Q5TAQ9 597 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 RBM43Q6ZSC3 357 aaKnown RBP11.67□□□□□ -0.54
RPE-206ENST00000429921 TRIM5Q9C035 493 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 ANO8Q9HCE9 1232 aaPredicted RBP11.67□□□□□ -0.54
RPE-206ENST00000429921 VAT1LQ9HCJ6 419 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 CCDC39Q9UFE4 941 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 SLC3A2P08195 630 aaKnown RBP11.67□□□□□ -0.54
RPE-206ENST00000429921 EZH2Q15910 746 aaKnown RBP11.67□□□□□ -0.54
RPE-206ENST00000429921 LONRF3Q496Y0 759 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 ZNF444Q8N0Y2 327 aaPredicted RBP11.67□□□□□ -0.54
RPE-206ENST00000429921 AOPEPQ8N6M6 819 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 ZC3H12CQ9C0D7 883 aaKnown RBP11.67□□□□□ -0.54
RPE-206ENST00000429921 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
RPE-206ENST00000429921 CCDC196A0A1B0GTZ2 297 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 IL1R1P14778 569 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 HSP90AA4PQ58FG1 418 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 DPP8Q6V1X1 898 aaPredicted RBP11.66□□□□□ -0.54
RPE-206ENST00000429921 CTCFLQ8NI51 663 aaPredicted RBP11.66□□□□□ -0.54
RPE-206ENST00000429921 KAT14Q9H8E8 782 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 NOL7Q9UMY1 257 aaKnown RBP11.66□□□□□ -0.54
RPE-206ENST00000429921 FAM196BA6NMK8 535 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 FGRP09769 529 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 CASP1P29466 404 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 HOXA10P31260 410 aaPredicted RBP11.66□□□□□ -0.54
RPE-206ENST00000429921 SYKP43405 635 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 ATL3Q6DD88 541 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 TMTC3Q6ZXV5 915 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 PNMA1Q8ND90 353 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 WASF1Q92558 559 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 CRAMP1Q96RY5 1269 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 TTF2Q9UNY4 1162 aaKnown RBP11.66□□□□□ -0.54
RPE-206ENST00000429921 ZKSCAN5Q9Y2L8 839 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 ATP6V0A2Q9Y487 856 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 STK36Q9NRP7 1315 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 MYH6P13533 1939 aa11.66□□□□□ -0.54
RPE-206ENST00000429921 ORC4O43929 436 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 PTGS1P23219 599 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 RXRBP28702 533 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 CDK8P49336 464 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 RHBDL3P58872 404 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 GSTO1P78417 241 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 SHROOM1Q2M3G4 852 aaPredicted RBP11.65□□□□□ -0.54
RPE-206ENST00000429921 SLC35G1Q2M3R5 365 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 SBK1Q52WX2 424 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 SP8Q8IXZ3 490 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 NLGN1Q8N2Q7 840 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 DDX4Q9NQI0 724 aaKnown RBP11.65□□□□□ -0.54
RPE-206ENST00000429921 DAGLAQ9Y4D2 1042 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 FLT1P17948 1338 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 PDS5AQ29RF7 1337 aaKnown RBP11.65□□□□□ -0.54
RPE-206ENST00000429921 CNTNAP5Q8WYK1 1306 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 RASA1P20936 1047 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 CMA1P23946 247 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 TCP10Q12799 353 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 IQCB1Q15051 598 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 C2CD5Q86YS7 1000 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 KIAA0825Q8IV33 1275 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 STAMQ92783 540 aa11.65□□□□□ -0.54
RPE-206ENST00000429921 A0A1W2PQ27 194 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 A0A1W2PQ64 194 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 A0A1W2PQD8 194 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 RAD21O60216 631 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 LDHCP07864 332 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 NLRP5P59047 1200 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 LRMPQ12912 555 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 STX1AQ16623 288 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 PIK3AP1Q6ZUJ8 805 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 HOMER1Q86YM7 354 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 ZFPM1Q8IX07 1006 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 DHX40Q8IX18 779 aaKnown RBP11.64□□□□□ -0.55
RPE-206ENST00000429921 TMEM47Q9BQJ4 181 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 RNF26Q9BY78 433 aaPredicted RBP11.64□□□□□ -0.55
RPE-206ENST00000429921 KCNF1Q9H3M0 494 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 ANKRD31Q8N7Z5 1873 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 KIAA1551Q9HCM1 1747 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 GPR75-ASB3A0A0A6YYF3 556 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 BECN2A8MW95 431 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 GOLGA6L19H0YKK7 550 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 POLR2DO15514 142 aaKnown RBP11.64□□□□□ -0.55
RPE-206ENST00000429921 PRPF3O43395 683 aaKnown RBP11.64□□□□□ -0.55
RPE-206ENST00000429921 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 TYW1BQ6NUM6 668 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 POTEAQ6S8J7 498 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 EPSTI1Q96J88 318 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 EYA3Q99504 573 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 PHF20Q9BVI0 1012 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 UBA5Q9GZZ9 404 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 CSRNP2Q9H175 543 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 PYCARDQ9ULZ3 195 aa11.64□□□□□ -0.55
RPE-206ENST00000429921 CDC25AP30304 524 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 KRT2P35908 639 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 RBM5P52756 815 aaKnown RBP eCLIP11.63□□□□□ -0.55
RPE-206ENST00000429921 ATP2B2Q01814 1243 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 ZNF772Q68DY9 489 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms