RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 N4BP3O15049 544 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 GPTP24298 496 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 ATP1A2P50993 1020 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 DPYDQ12882 1025 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 CDKAL1Q5VV42 579 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 CYB5R4Q7L1T6 521 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 OTUD6BQ8N6M0 293 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 GIMAP7Q8NHV1 300 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 HDAC7Q8WUI4 952 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 STAMQ92783 540 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 TAB2Q9NYJ8 693 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 KCNG1Q9UIX4 513 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 PCDHB6Q9Y5E3 794 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 C4AP0C0L4 1744 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 C4BP0C0L5 1744 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 PXDNQ92626 1479 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 A0A087WZG4 1122 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 MCM3P25205 808 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 CUL4BQ13620 913 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 SH2D3CQ8N5H7 860 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 ZNF622Q969S3 477 aaKnown RBP eCLIP12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 SLC26A6Q9BXS9 759 aa12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 GNL3LQ9NVN8 582 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-209ENST00000429836 A0A087X0B3 334 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 KIF1CO43896 1103 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 ZEB2O60315 1214 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 FECHP22830 423 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 IARSP41252 1262 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 KRT31Q15323 416 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 TRIML1Q8N9V2 468 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 ZKSCAN4Q969J2 545 aaPredicted RBP12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 JAKMIP2Q96AA8 810 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 CCDC51Q96ER9 411 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 CSRNP2Q9H175 543 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 CTNND2Q9UQB3 1225 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 EPN1Q9Y6I3 576 aaPredicted RBP12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 UBN2Q6ZU65 1347 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 ZNF213O14771 459 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 KIAA0754O94854 1291 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 NDUFA10O95299 355 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 PTPREP23469 700 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 GUCY1A2P33402 732 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 PPARDQ03181 441 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 CCDC122Q5T0U0 273 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 KCTD16Q68DU8 428 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 NOSTRINQ8IVI9 506 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 AIDAQ96BJ3 306 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 PUS7LQ9H0K6 701 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 CENPHQ9H3R5 247 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 HEG1Q9ULI3 1381 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 TARSL2A2RTX5 802 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 PSMD14O00487 310 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 ACTN3Q08043 901 aaPredicted RBP12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 TTMPQ5BVD1 217 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 CCDC82Q8N4S0 544 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 SH3GL2Q99962 352 aa12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 ANGEL1Q9UNK9 670 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-209ENST00000429836 CPDO75976 1380 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 HERVK_113P62684 666 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 PPARAQ07869 468 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 NR5A1Q13285 461 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 RABL6Q3YEC7 729 aaPredicted RBP12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 APOA5Q6Q788 366 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 ELOA2Q8IYF1 753 aaPredicted RBP12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 TSEN2Q8NCE0 465 aaKnown RBP12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 AENQ8WTP8 325 aaKnown RBP12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 EPSTI1Q96J88 318 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 CTAGE1Q96RT6 745 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 AMOTL2Q9Y2J4 779 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 CDKL5O76039 1030 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 MATR3P43243 847 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 SLC7A5Q01650 507 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 RNF187Q5TA31 235 aaPredicted RBP12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 DIS3L2Q8IYB7 885 aaKnown RBP12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 SPATA20Q8TB22 786 aa12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 DMGDHQ9UI17 866 aaKnown RBP12.47□□□□□ -0.41
SEMA4D-209ENST00000429836 CCDC189A1A4V9 331 aa12.46□□□□□ -0.41
SEMA4D-209ENST00000429836 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.41
SEMA4D-209ENST00000429836 NTRK3Q16288 839 aa12.46□□□□□ -0.41
SEMA4D-209ENST00000429836 TBC1D10CQ8IV04 446 aa12.46□□□□□ -0.41
SEMA4D-209ENST00000429836 N4BP2L2Q92802 583 aaPredicted RBP12.46□□□□□ -0.41
SEMA4D-209ENST00000429836 XAGE2Q96GT9 111 aa12.46□□□□□ -0.41
SEMA4D-209ENST00000429836 FAM184BQ9ULE4 1060 aa12.46□□□□□ -0.41
SEMA4D-209ENST00000429836 ADAMTS13Q76LX8 1427 aa12.46□□□□□ -0.41
SEMA4D-209ENST00000429836 GOLGA8AA7E2F4 631 aa12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 MEFVO15553 781 aaPredicted RBP12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 RDXP35241 583 aaKnown RBP12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 PPP2R5AQ15172 486 aa12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 PAPD7Q5XG87 772 aaKnown RBP12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 LMOD2Q6P5Q4 547 aa12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 PI16Q6UXB8 463 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms