RNA–Protein interactions for RNA: ENST00000429781.1

LINC00476-204, long intergenic non-protein coding RNA 476, humanhuman

TSL 2 BASIC

Gene LINC00476, Length 2,825 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-204ENST00000429781 FANCLQ9NW38 375 aa17.21■□□□□ 0.35
LINC00476-204ENST00000429781 CYP2D6P10635 497 aa17.21■□□□□ 0.35
LINC00476-204ENST00000429781 XBP1P17861 261 aa17.21■□□□□ 0.35
LINC00476-204ENST00000429781 UBASH3AP57075 661 aa17.21■□□□□ 0.35
LINC00476-204ENST00000429781 SLC4A8Q2Y0W8 1093 aa17.21■□□□□ 0.35
LINC00476-204ENST00000429781 HSP90AA4PQ58FG1 418 aa17.21■□□□□ 0.35
LINC00476-204ENST00000429781 FAM47AQ5JRC9 791 aa17.21■□□□□ 0.35
LINC00476-204ENST00000429781 PAXIP1Q6ZW49 1069 aaPredicted RBP17.21■□□□□ 0.35
LINC00476-204ENST00000429781 CCDC112Q8NEF3 446 aa17.21■□□□□ 0.35
LINC00476-204ENST00000429781 CEP131Q9UPN4 1083 aa17.21■□□□□ 0.35
LINC00476-204ENST00000429781 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC00476-204ENST00000429781 LAMB1P07942 1786 aa17.2■□□□□ 0.34
LINC00476-204ENST00000429781 WNT7AO00755 349 aa17.2■□□□□ 0.34
LINC00476-204ENST00000429781 PRPF3O43395 683 aaKnown RBP17.2■□□□□ 0.34
LINC00476-204ENST00000429781 KRT2P35908 639 aa17.2■□□□□ 0.34
LINC00476-204ENST00000429781 CFAP100Q494V2 611 aa17.2■□□□□ 0.34
LINC00476-204ENST00000429781 E4F1Q66K89 784 aaPredicted RBP17.2■□□□□ 0.34
LINC00476-204ENST00000429781 NOM1Q5C9Z4 860 aaKnown RBP17.2■□□□□ 0.34
LINC00476-204ENST00000429781 ZNF579Q8NAF0 562 aaKnown RBP17.2■□□□□ 0.34
LINC00476-204ENST00000429781 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
LINC00476-204ENST00000429781 HOOK1Q9UJC3 728 aaKnown RBP17.2■□□□□ 0.34
LINC00476-204ENST00000429781 ACTN4O43707 911 aaKnown RBP17.2■□□□□ 0.34
LINC00476-204ENST00000429781 ZPR1O75312 459 aa17.2■□□□□ 0.34
LINC00476-204ENST00000429781 RPS6KA4O75676 772 aa17.2■□□□□ 0.34
LINC00476-204ENST00000429781 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
LINC00476-204ENST00000429781 CRNKL1Q9BZJ0 848 aaKnown RBP17.2■□□□□ 0.34
LINC00476-204ENST00000429781 CNTNAP5Q8WYK1 1306 aa17.19■□□□□ 0.34
LINC00476-204ENST00000429781 TRIM75PA6NK02 468 aa17.19■□□□□ 0.34
LINC00476-204ENST00000429781 TMEM232C9JQI7 657 aa17.19■□□□□ 0.34
LINC00476-204ENST00000429781 PCP11498 1178 aaKnown RBP17.19■□□□□ 0.34
LINC00476-204ENST00000429781 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
LINC00476-204ENST00000429781 ELOA2Q8IYF1 753 aaPredicted RBP17.19■□□□□ 0.34
LINC00476-204ENST00000429781 BTAF1O14981 1849 aa17.19■□□□□ 0.34
LINC00476-204ENST00000429781 DDAH1O94760 285 aa17.19■□□□□ 0.34
LINC00476-204ENST00000429781 FMR1Q06787 632 aaKnown RBP eCLIP17.19■□□□□ 0.34
LINC00476-204ENST00000429781 NCBP1Q09161 790 aaKnown RBP17.19■□□□□ 0.34
LINC00476-204ENST00000429781 ANKRD7Q92527 254 aa17.19■□□□□ 0.34
LINC00476-204ENST00000429781 KIAA1551Q9HCM1 1747 aa17.19■□□□□ 0.34
LINC00476-204ENST00000429781 KCND1Q9NSA2 647 aa17.19■□□□□ 0.34
LINC00476-204ENST00000429781 MAST2Q6P0Q8 1798 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 A0A087X0B3 334 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 CALM1P0DP23 149 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 CALM2P0DP24 149 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 CALM3P0DP25 149 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 NPY5RQ15761 445 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 SMARCE1Q969G3 411 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 TNRC6CQ9HCJ0 1690 aaKnown RBP17.18■□□□□ 0.34
LINC00476-204ENST00000429781 PDS5AQ29RF7 1337 aaKnown RBP17.18■□□□□ 0.34
LINC00476-204ENST00000429781 RGL2O15211 777 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 ORC4O43929 436 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 NAA30Q147X3 362 aaPredicted RBP17.18■□□□□ 0.34
LINC00476-204ENST00000429781 NT5DC1Q5TFE4 455 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 TRMT44Q8IYL2 757 aaKnown RBP17.18■□□□□ 0.34
LINC00476-204ENST00000429781 SRBD1Q8N5C6 995 aaKnown RBP17.18■□□□□ 0.34
LINC00476-204ENST00000429781 NGLY1Q96IV0 654 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 EPSTI1Q96J88 318 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 INTS13Q9NVM9 706 aa17.18■□□□□ 0.34
LINC00476-204ENST00000429781 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
LINC00476-204ENST00000429781 CBFA2T2O43439 604 aa17.17■□□□□ 0.34
LINC00476-204ENST00000429781 SARSP49591 514 aaKnown RBP17.17■□□□□ 0.34
LINC00476-204ENST00000429781 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
LINC00476-204ENST00000429781 DHX58Q96C10 678 aa17.17■□□□□ 0.34
LINC00476-204ENST00000429781 PPP1R13BQ96KQ4 1090 aa17.17■□□□□ 0.34
LINC00476-204ENST00000429781 CGNQ9P2M7 1197 aaKnown RBP17.17■□□□□ 0.34
LINC00476-204ENST00000429781 BAZ2BQ9UIF8 2168 aaKnown RBP17.17■□□□□ 0.34
LINC00476-204ENST00000429781 GOLGA8FQ08AF8 430 aa17.17■□□□□ 0.34
LINC00476-204ENST00000429781 GOLGA8DPQ0D2H9 430 aa17.17■□□□□ 0.34
LINC00476-204ENST00000429781 VPS72Q15906 364 aa17.17■□□□□ 0.34
LINC00476-204ENST00000429781 RC3H1Q5TC82 1133 aaKnown RBP17.17■□□□□ 0.34
LINC00476-204ENST00000429781 TM4SF1P30408 202 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 MORC3Q14149 939 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 CTCFLQ8NI51 663 aaPredicted RBP17.16■□□□□ 0.34
LINC00476-204ENST00000429781 TNFRSF25Q93038 417 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 ATP8A2Q9NTI2 1148 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 ARPP21Q9UBL0 812 aaPredicted RBP17.16■□□□□ 0.34
LINC00476-204ENST00000429781 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
LINC00476-204ENST00000429781 NPHP1O15259 732 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 DZIP1Q86YF9 867 aaKnown RBP17.16■□□□□ 0.34
LINC00476-204ENST00000429781 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 PDCL2Q8N4E4 241 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 RTCBQ9Y3I0 505 aaKnown RBP17.16■□□□□ 0.34
LINC00476-204ENST00000429781 NFE2L3Q9Y4A8 694 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 CCDC88AQ3V6T2 1871 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 TSPY2A6NKD2 308 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
LINC00476-204ENST00000429781 ZNF174Q15697 407 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 SYMPKQ92797 1274 aaKnown RBP17.16■□□□□ 0.34
LINC00476-204ENST00000429781 ARHGEF1Q92888 912 aaKnown RBP17.16■□□□□ 0.34
LINC00476-204ENST00000429781 BRMS1Q9HCU9 246 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 MCM9Q9NXL9 1143 aa17.16■□□□□ 0.34
LINC00476-204ENST00000429781 USP17L8P0C7I0 530 aa17.15■□□□□ 0.34
LINC00476-204ENST00000429781 VEGFAP15692 232 aaPredicted RBP17.15■□□□□ 0.34
LINC00476-204ENST00000429781 MLKLQ8NB16 471 aa17.15■□□□□ 0.34
LINC00476-204ENST00000429781 MED15Q96RN5 788 aa17.15■□□□□ 0.34
LINC00476-204ENST00000429781 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
LINC00476-204ENST00000429781 CASP1P29466 404 aa17.15■□□□□ 0.34
LINC00476-204ENST00000429781 NRDCO43847 1150 aa17.14■□□□□ 0.33
LINC00476-204ENST00000429781 TOP1P11387 765 aaKnown RBP17.14■□□□□ 0.33
LINC00476-204ENST00000429781 AFMP43652 599 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms