RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 TMEM63CQ9P1W3 806 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 NDUFA5Q16718 116 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 KCNH5Q8NCM2 988 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 MYD88Q99836 296 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 KLC4Q9NSK0 619 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 NOC2LQ9Y3T9 749 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 TCP1P17987 556 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 VCAM1P19320 739 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 NONOQ15233 471 aaKnown RBP eCLIP8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 RSPH3Q86UC2 560 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 TSG101Q99816 390 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 KLHL14Q9P2G3 628 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 NPATQ14207 1427 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 GSTA1P08263 222 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 FAM204AQ9H8W3 233 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 CHPF2Q9P2E5 772 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 CFAP221Q4G0U5 840 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 RETREG2Q8NC44 543 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 NAPBQ9H115 298 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 JADE2Q9NQC1 790 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 ZEB2O60315 1214 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 TUBA3CQ13748 450 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 CREB3L3Q68CJ9 461 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 CC2D1AQ6P1N0 951 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 PAF1Q8N7H5 531 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 TERB1Q8NA31 727 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 POLKQ9UBT6 870 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 FAM169AQ9Y6X4 670 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 VWA3BQ502W6 1294 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 MLKLQ8NB16 471 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 CATSPER2Q96P56 530 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 ROR2Q01974 943 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 PPP1R21Q6ZMI0 780 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 ZCRB1Q8TBF4 217 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 DKK3Q9UBP4 350 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 MEFVO15553 781 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 TBC1D12O60347 775 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 ST5P78524 1137 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 ATP2B3Q16720 1220 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 PHACTR3Q96KR7 559 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 BIRC5O15392 142 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 LIG3P49916 1009 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 TMED8Q6PL24 325 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 SNRNP27Q8WVK2 155 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 ZSWIM4Q9H7M6 989 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 ANGPTL2Q9UKU9 493 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 POLR2EP19388 210 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 PCYT1AP49585 367 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 PDE6CP51160 858 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 MCMDC2Q4G0Z9 681 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 BICDL2A1A5D9 508 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 GADD45BO75293 160 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 MPRIPQ6WCQ1 1025 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 USHBP1Q8N6Y0 703 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 RAB17Q9H0T7 212 aa8.34□□□□□ -1.07
SYNPO2-202ENST00000429713 KLHL33A6NCF5 533 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 METAP2P50579 478 aaKnown RBP eCLIP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 CCDC144CPQ8IYA2 1237 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 CAPZA3Q96KX2 299 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 PDE11AQ9HCR9 933 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 IGSF3O75054 1194 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 CHGBP05060 677 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 KRT18P05783 430 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 SAR1BQ9Y6B6 198 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 ESRRBO95718 433 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 H2AFXP16104 143 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 HLTFQ14527 1009 aaKnown RBP eCLIP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 ADRM1Q16186 407 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 C8orf74Q6P047 294 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 KLC3Q6P597 504 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 SCINQ9Y6U3 715 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 GRM8O00222 908 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 THEMISQ8N1K5 641 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 CCDC63Q8NA47 563 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 IKBKGQ9Y6K9 419 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 ZNF521Q96K83 1311 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 MYO18AQ92614 2054 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 HARSP12081 509 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 PHBP35232 272 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 METTL24Q5JXM2 366 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 ZFYVE27Q5T4F4 411 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 C17orf53Q8N3J3 647 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 MAK16Q9BXY0 300 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 LRP2BPQ9P2M1 347 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 GOLGA8QA0A0J9YX86 632 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 GOLGA8OA6NCC3 632 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 GOLGA8NF8WBI6 632 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 H0YC42 278 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 TADA3O75528 432 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 TPD52P55327 224 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 USH1GQ495M9 461 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 CATSPER1Q8NEC5 780 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 USP33Q8TEY7 942 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 CPLX3Q8WVH0 158 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 MCUR1Q96AQ8 359 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 PASD1Q8IV76 773 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 HAUS1Q96CS2 278 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 TRAPPC9Q96Q05 1148 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms