RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 GTF2A1P52655 376 aaPredicted RBP10.05□□□□□ -0.8
CDH13-202ENST00000428848 RCAN1P53805 252 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 DDB1Q16531 1140 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 GRIPAP1Q4V328 841 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 KANK3Q6NY19 840 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 SRLQ86TD4 932 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 NLRP10Q86W26 655 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 SMARCE1Q969G3 411 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 PANX2Q96RD6 677 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 MRPL44Q9H9J2 332 aaKnown RBP10.05□□□□□ -0.8
CDH13-202ENST00000428848 SEC31BQ9NQW1 1179 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 SAMSN1Q9NSI8 373 aaKnown RBP10.05□□□□□ -0.8
CDH13-202ENST00000428848 TRMT112Q9UI30 125 aaKnown RBP10.05□□□□□ -0.8
CDH13-202ENST00000428848 IFIT3O14879 490 aaKnown RBP10.04□□□□□ -0.8
CDH13-202ENST00000428848 CTSWP56202 376 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 CTDSPL2Q05D32 466 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
CDH13-202ENST00000428848 AKNAD1Q5T1N1 836 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 SH3RF1Q7Z6J0 888 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 CERS3Q8IU89 383 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 SMARCC1Q92922 1105 aaPredicted RBP10.04□□□□□ -0.8
CDH13-202ENST00000428848 EXOC4Q96A65 974 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 AIDAQ96BJ3 306 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 PARD6BQ9BYG5 372 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 KRT23Q9C075 422 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 CNNM2Q9H8M5 875 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 CNNM1Q9NRU3 951 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 KCNJ14Q9UNX9 436 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 PCDHB6Q9Y5E3 794 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 MYH8P13535 1937 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 CICQ96RK0 1608 aaPredicted RBP10.04□□□□□ -0.8
CDH13-202ENST00000428848 GSG1L2A8MUP6 293 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 IRS4O14654 1257 aaPredicted RBP10.04□□□□□ -0.8
CDH13-202ENST00000428848 DEXIO95424 95 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 FECHP22830 423 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 SAFBQ15424 915 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDH13-202ENST00000428848 HLFQ16534 295 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 ZNF827Q17R98 1081 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 PARP10Q53GL7 1025 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 HSP90AA4PQ58FG1 418 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
CDH13-202ENST00000428848 TRMT44Q8IYL2 757 aaKnown RBP10.04□□□□□ -0.8
CDH13-202ENST00000428848 FAM177A1Q8N128 213 aaPredicted RBP10.04□□□□□ -0.8
CDH13-202ENST00000428848 CRACR2BQ8N4Y2 399 aaPredicted RBP10.04□□□□□ -0.8
CDH13-202ENST00000428848 PDILTQ8N807 584 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 STAG1Q8WVM7 1258 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 DHX58Q96C10 678 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 FUT8Q9BYC5 575 aa10.04□□□□□ -0.8
CDH13-202ENST00000428848 NRAPQ86VF7 1730 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 MYH2Q9UKX2 1941 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 MAP2K7O14733 419 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 CUL4BQ13620 913 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 RTN1Q16799 776 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 USP49Q70CQ1 688 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 GRAMD1CQ8IYS0 662 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 NAA15Q9BXJ9 866 aaKnown RBP10.03□□□□□ -0.8
CDH13-202ENST00000428848 NAPBQ9H115 298 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 AATFQ9NY61 560 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDH13-202ENST00000428848 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 MROH5Q6ZUA9 1318 aa10.03□□□□□ -0.8
CDH13-202ENST00000428848 CCDC151A5D8V7 595 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 AKR1B15C9JRZ8 316 aaPredicted RBP10.02□□□□□ -0.8
CDH13-202ENST00000428848 POLR3GO15318 223 aaPredicted RBP10.02□□□□□ -0.8
CDH13-202ENST00000428848 TEX33O43247 280 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 CCDC175P0C221 793 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 OAS2P29728 719 aaKnown RBP10.02□□□□□ -0.8
CDH13-202ENST00000428848 TXLNAP40222 546 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 NR5A1Q13285 461 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 MTF1Q14872 753 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 CDKAL1Q5VV42 579 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 JAKMIP3Q5VZ66 844 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 RAD9BQ6WBX8 426 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 C10orf67Q8IYJ2 551 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 TRIM22Q8IYM9 498 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 LPIN2Q92539 896 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 GOLGA1Q92805 767 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 SHISA4Q96DD7 197 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 MYCBPQ99417 103 aaPredicted RBP10.02□□□□□ -0.8
CDH13-202ENST00000428848 NCAPGQ9BPX3 1015 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 DESI2Q9BSY9 194 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 CSRNP2Q9H175 543 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 ARFGAP3Q9NP61 516 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 ADD3Q9UEY8 706 aaKnown RBP10.02□□□□□ -0.8
CDH13-202ENST00000428848 KCNG1Q9UIX4 513 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 ZNF652Q9Y2D9 606 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 SPATA31A1Q5TZJ5 1347 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 PNPLA7Q6ZV29 1317 aa10.02□□□□□ -0.8
CDH13-202ENST00000428848 A0A087X0B3 334 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 SEMA3EO15041 775 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 MBD4O95243 580 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 IVLP07476 585 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 CD44P16070 742 aaKnown RBP10.02□□□□□ -0.81
CDH13-202ENST00000428848 GUCY2CP25092 1073 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 ST5P78524 1137 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 SMC1AQ14683 1233 aaKnown RBP10.02□□□□□ -0.81
CDH13-202ENST00000428848 BRD3Q15059 726 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 PUM3Q15397 648 aaKnown RBP10.02□□□□□ -0.81
CDH13-202ENST00000428848 SPATA1Q5VX52 437 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 MFSD6Q6ZSS7 791 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms