RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 INTS4Q96HW7 963 aaKnown RBP12.72□□□□□ -0.37
CRIM1-204ENST00000428774 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
CRIM1-204ENST00000428774 GLIS2Q9BZE0 524 aaPredicted RBP12.72□□□□□ -0.37
CRIM1-204ENST00000428774 NCOA5Q9HCD5 579 aaKnown RBP12.72□□□□□ -0.37
CRIM1-204ENST00000428774 TCP11L1Q9NUJ3 509 aa12.72□□□□□ -0.37
CRIM1-204ENST00000428774 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
CRIM1-204ENST00000428774 NAP1L2Q9ULW6 460 aaPredicted RBP12.72□□□□□ -0.37
CRIM1-204ENST00000428774 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
CRIM1-204ENST00000428774 GOLGA8AA7E2F4 631 aa12.71□□□□□ -0.37
CRIM1-204ENST00000428774 TRAF5O00463 557 aa12.71□□□□□ -0.37
CRIM1-204ENST00000428774 GDF11O95390 407 aa12.71□□□□□ -0.37
CRIM1-204ENST00000428774 CCT2P78371 535 aaKnown RBP12.71□□□□□ -0.37
CRIM1-204ENST00000428774 IFIT1BQ5T764 474 aaKnown RBP12.71□□□□□ -0.37
CRIM1-204ENST00000428774 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
CRIM1-204ENST00000428774 PNMA8AQ86V59 439 aaPredicted RBP12.71□□□□□ -0.37
CRIM1-204ENST00000428774 LDHDQ86WU2 507 aa12.71□□□□□ -0.37
CRIM1-204ENST00000428774 MICU3Q86XE3 530 aa12.71□□□□□ -0.37
CRIM1-204ENST00000428774 CEP95Q96GE4 821 aa12.71□□□□□ -0.37
CRIM1-204ENST00000428774 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.71□□□□□ -0.373e-6■■■□□ 17.9
CRIM1-204ENST00000428774 MYH15Q9Y2K3 1946 aa12.7□□□□□ -0.38
CRIM1-204ENST00000428774 ZBTB43O43298 467 aa12.7□□□□□ -0.38
CRIM1-204ENST00000428774 NOVP48745 357 aa12.7□□□□□ -0.38
CRIM1-204ENST00000428774 METAP2P50579 478 aaKnown RBP eCLIP12.7□□□□□ -0.38
CRIM1-204ENST00000428774 JAG1P78504 1218 aa12.7□□□□□ -0.38
CRIM1-204ENST00000428774 NSUN7Q8NE18 718 aaKnown RBP12.7□□□□□ -0.38
CRIM1-204ENST00000428774 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
CRIM1-204ENST00000428774 CCDC17Q96LX7 622 aa12.7□□□□□ -0.38
CRIM1-204ENST00000428774 DEFB129Q9H1M3 183 aa12.7□□□□□ -0.38
CRIM1-204ENST00000428774 SLC12A7Q9Y666 1083 aa12.7□□□□□ -0.38
CRIM1-204ENST00000428774 TBC1D12O60347 775 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 JAK2O60674 1132 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 DDAH1O94760 285 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 CDC27P30260 824 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 RCAN1P53805 252 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 MAP3K10Q02779 954 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 CERKLQ49MI3 558 aaPredicted RBP12.69□□□□□ -0.38
CRIM1-204ENST00000428774 CCDC178Q5BJE1 867 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 NBPF12Q5TAG4 269 aaPredicted RBP12.69□□□□□ -0.38
CRIM1-204ENST00000428774 CHADLQ6NUI6 762 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 RASGRP2Q7LDG7 609 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 CCDC144CPQ8IYA2 1237 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 FAM217BQ9NTX9 383 aaPredicted RBP12.69□□□□□ -0.38
CRIM1-204ENST00000428774 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
CRIM1-204ENST00000428774 PTPDC1A2A3K4 754 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
CRIM1-204ENST00000428774 GJB2P29033 226 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 ABCB5Q2M3G0 1257 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 MIGA2Q7L4E1 593 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 KRT26Q7Z3Y9 468 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 TMTC2Q8N394 836 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 SMARCC2Q8TAQ2 1214 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 DCPSQ96C86 337 aaKnown RBP12.68□□□□□ -0.38
CRIM1-204ENST00000428774 TMEM47Q9BQJ4 181 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 KAT14Q9H8E8 782 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 MTMR4Q9NYA4 1195 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 STX8Q9UNK0 236 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 FZD1Q9UP38 647 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 SMC3Q9UQE7 1217 aa12.68□□□□□ -0.38
CRIM1-204ENST00000428774 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.68□□□□□ -0.38
CRIM1-204ENST00000428774 ITGBL1O95965 494 aaPredicted RBP12.67□□□□□ -0.38
CRIM1-204ENST00000428774 GH2P01242 217 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 TROAPQ12815 778 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 SEPT2Q15019 361 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 RTN1Q16799 776 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 SYNE3Q6ZMZ3 975 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 TMEM179Q6ZVK1 233 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 CATIPQ7Z7H3 387 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 LRRC47Q8N1G4 583 aaKnown RBP12.67□□□□□ -0.38
CRIM1-204ENST00000428774 PNMA1Q8ND90 353 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 ZC3H15Q8WU90 426 aaKnown RBP12.67□□□□□ -0.38
CRIM1-204ENST00000428774 NUP133Q8WUM0 1156 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
CRIM1-204ENST00000428774 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.67□□□□□ -0.38
CRIM1-204ENST00000428774 ZBTB21Q9ULJ3 1066 aa12.67□□□□□ -0.38
CRIM1-204ENST00000428774 PHF20L1A8MW92 1017 aa12.66□□□□□ -0.38
CRIM1-204ENST00000428774 PPFIA3O75145 1194 aa12.66□□□□□ -0.38
CRIM1-204ENST00000428774 TOMM70O94826 608 aa12.66□□□□□ -0.38
CRIM1-204ENST00000428774 TOP1P11387 765 aaKnown RBP12.66□□□□□ -0.38
CRIM1-204ENST00000428774 ADD1P35611 737 aaKnown RBP12.66□□□□□ -0.38
CRIM1-204ENST00000428774 ICA1Q05084 483 aa12.66□□□□□ -0.38
CRIM1-204ENST00000428774 GRM4Q14833 912 aa12.66□□□□□ -0.38
CRIM1-204ENST00000428774 NTRK3Q16288 839 aa12.66□□□□□ -0.38
CRIM1-204ENST00000428774 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
CRIM1-204ENST00000428774 CDCA5Q96FF9 252 aa12.66□□□□□ -0.38
CRIM1-204ENST00000428774 CWC22Q9HCG8 908 aaKnown RBP12.66□□□□□ -0.38
CRIM1-204ENST00000428774 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
CRIM1-204ENST00000428774 PARP14Q460N5 1801 aa12.66□□□□□ -0.38
CRIM1-204ENST00000428774 PTPRFP10586 1907 aa12.66□□□□□ -0.38
CRIM1-204ENST00000428774 CNTNAP5Q8WYK1 1306 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 PLEKHA8P1O95397 391 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 TTLL1O95922 423 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 CALM1P0DP23 149 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 CALM2P0DP24 149 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 CALM3P0DP25 149 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 EEF2P13639 858 aaKnown RBP12.65□□□□□ -0.38
CRIM1-204ENST00000428774 CAP2P40123 477 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 PKP1Q13835 747 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms