RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 TMEM179Q6ZVK1 233 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-209ENST00000428574 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 NCOA5Q9HCD5 579 aaKnown RBP10.56□□□□□ -0.72
NR1I3-209ENST00000428574 IL17RBQ9NRM6 502 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 FAM217BQ9NTX9 383 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-209ENST00000428574 MTMR4Q9NYA4 1195 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-209ENST00000428574 ZBTB12Q9Y330 459 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-209ENST00000428574 PITPNM2Q9BZ72 1349 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 CNTNAP1P78357 1384 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 H7C1D1 291 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 SMIM22K7EJ46 135 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 JAK2O60674 1132 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 TTLL1O95922 423 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 CDC27P30260 824 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
NR1I3-209ENST00000428574 SSRP1Q08945 709 aaKnown RBP10.55□□□□□ -0.72
NR1I3-209ENST00000428574 FAM47AQ5JRC9 791 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 APOBEC3FQ8IUX4 373 aaKnown RBP10.55□□□□□ -0.72
NR1I3-209ENST00000428574 ZSCAN29Q8IWY8 852 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-209ENST00000428574 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 CSRNP1Q96S65 589 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 GPRC5DQ9NZD1 345 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 NYAP2Q9P242 653 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 ORC3Q9UBD5 711 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-209ENST00000428574 CNOT7Q9UIV1 285 aaKnown RBP10.55□□□□□ -0.72
NR1I3-209ENST00000428574 SIPA1L1O43166 1804 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 ZNF541Q9H0D2 1346 aa10.55□□□□□ -0.72
NR1I3-209ENST00000428574 DDTLA6NHG4 134 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-209ENST00000428574 H3BQV1 296 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 hCG_1984214I3L0E3 225 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 PRPF3O43395 683 aaKnown RBP10.54□□□□□ -0.72
NR1I3-209ENST00000428574 BAG4O95429 457 aaKnown RBP10.54□□□□□ -0.72
NR1I3-209ENST00000428574 SNHG28P0DPA3 235 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 FDPSP14324 419 aaKnown RBP10.54□□□□□ -0.72
NR1I3-209ENST00000428574 XBP1P17861 261 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 ADD1P35611 737 aaKnown RBP10.54□□□□□ -0.72
NR1I3-209ENST00000428574 EVX2Q03828 476 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 FUT2Q10981 343 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 PKP1Q13835 747 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 GRM4Q14833 912 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 KIF4BQ2VIQ3 1234 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 SKOR2Q2VWA4 1001 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-209ENST00000428574 CERKLQ49MI3 558 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-209ENST00000428574 ASPRV1Q53RT3 343 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 IFFO2Q5TF58 517 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 TMTC3Q6ZXV5 915 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 BRAPQ7Z569 592 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 TEX2Q8IWB9 1127 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 ZNF713Q8N859 430 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-209ENST00000428574 TMEM87AQ8NBN3 555 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 FBXO18Q8NFZ0 1043 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 MKL1Q969V6 931 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 CEP95Q96GE4 821 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 L3MBTL3Q96JM7 780 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-209ENST00000428574 TMEM47Q9BQJ4 181 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 DNAJC18Q9H819 358 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
NR1I3-209ENST00000428574 SBF1O95248 1867 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
NR1I3-209ENST00000428574 AKAP17AQ02040 695 aaKnown RBP10.53□□□□□ -0.72
NR1I3-209ENST00000428574 TCP10Q12799 353 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 TRIM29Q14134 588 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 GPATCH4Q5T3I0 446 aaKnown RBP10.53□□□□□ -0.72
NR1I3-209ENST00000428574 NBPF11Q86T75 865 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 STK11IPQ8N1F8 1099 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 C8orf76Q96K31 380 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
NR1I3-209ENST00000428574 SH3GLB2Q9NR46 395 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 PGAP2Q9UHJ9 254 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 STX8Q9UNK0 236 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 PCDHAC2Q9Y5I4 1007 aa10.53□□□□□ -0.72
NR1I3-209ENST00000428574 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
NR1I3-209ENST00000428574 AKR1B1P15121 316 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 YBX3P16989 372 aaKnown RBP eCLIP10.52□□□□□ -0.73
NR1I3-209ENST00000428574 CACNB3P54284 484 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 CDC37L1Q7L3B6 337 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 ZFPM1Q8IX07 1006 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 GMCL1P1Q8NEA9 526 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 NUP133Q8WUM0 1156 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 ALG1Q9BT22 464 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 SH2D4AQ9H788 454 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.52□□□□□ -0.73
NR1I3-209ENST00000428574 CABP5Q9NP86 173 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 ADARB2Q9NS39 739 aaKnown RBP10.52□□□□□ -0.73
NR1I3-209ENST00000428574 RNF181Q9P0P0 153 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 ELP1O95163 1332 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 CNTNAP5Q8WYK1 1306 aa10.52□□□□□ -0.73
NR1I3-209ENST00000428574 MYH8P13535 1937 aa10.51□□□□□ -0.73
NR1I3-209ENST00000428574 CLRN2A0PK11 232 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms