RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TXNRD2Q9NNW7 524 aa22.17■■□□□ 1.14
PSPC1-202ENST00000427943 SLC4A4Q9Y6R1 1079 aa22.17■■□□□ 1.14
PSPC1-202ENST00000427943 PARP14Q460N5 1801 aa22.16■■□□□ 1.14
PSPC1-202ENST00000427943 UBXN2AP68543 259 aa22.16■■□□□ 1.14
PSPC1-202ENST00000427943 KBTBD3Q8NAB2 608 aa22.16■■□□□ 1.14
PSPC1-202ENST00000427943 C12orf42Q96LP6 360 aa22.16■■□□□ 1.14
PSPC1-202ENST00000427943 KIAA1683Q9H0B3 1180 aa22.16■■□□□ 1.14
PSPC1-202ENST00000427943 IRF5Q13568 498 aa22.15■■□□□ 1.14
PSPC1-202ENST00000427943 OTUD7AQ8TE49 926 aaPredicted RBP22.15■■□□□ 1.14
PSPC1-202ENST00000427943 SHISA4Q96DD7 197 aa22.15■■□□□ 1.14
PSPC1-202ENST00000427943 PAGR1Q9BTK6 254 aa22.15■■□□□ 1.14
PSPC1-202ENST00000427943 RNF208Q9H0X6 261 aa22.15■■□□□ 1.14
PSPC1-202ENST00000427943 SWAP70Q9UH65 585 aa22.15■■□□□ 1.14
PSPC1-202ENST00000427943 RLFQ13129 1914 aa22.14■■□□□ 1.14
PSPC1-202ENST00000427943 USP17L12C9JPN9 530 aa22.14■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L21D6R901 530 aa22.14■■□□□ 1.13
PSPC1-202ENST00000427943 INHAP05111 366 aa22.14■■□□□ 1.13
PSPC1-202ENST00000427943 VCAM1P19320 739 aa22.14■■□□□ 1.13
PSPC1-202ENST00000427943 USP14P54578 494 aa22.14■■□□□ 1.13
PSPC1-202ENST00000427943 CLEC10AQ8IUN9 316 aa22.14■■□□□ 1.13
PSPC1-202ENST00000427943 DDRGK1Q96HY6 314 aa22.14■■□□□ 1.13
PSPC1-202ENST00000427943 UNC93B1Q9H1C4 597 aa22.14■■□□□ 1.13
PSPC1-202ENST00000427943 RBPJLQ9UBG7 517 aa22.14■■□□□ 1.13
PSPC1-202ENST00000427943 C12orf60Q5U649 245 aa22.13■■□□□ 1.13
PSPC1-202ENST00000427943 POTEEQ6S8J3 1075 aa22.13■■□□□ 1.13
PSPC1-202ENST00000427943 AMOTL1Q8IY63 956 aa22.13■■□□□ 1.13
PSPC1-202ENST00000427943 GPRC5AQ8NFJ5 357 aa22.13■■□□□ 1.13
PSPC1-202ENST00000427943 PXYLP1Q8TE99 480 aa22.13■■□□□ 1.13
PSPC1-202ENST00000427943 A0A0G2JMZ2 1700 aa22.13■■□□□ 1.13
PSPC1-202ENST00000427943 GREB1LQ9C091 1923 aaPredicted RBP22.13■■□□□ 1.13
PSPC1-202ENST00000427943 TTC41PQ6P2S7 1318 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 A0A1W2PRG0 241 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L15C9J2P7 530 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L13C9JLJ4 530 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L11C9JVI0 530 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L18D6R9N7 530 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L22D6RA61 530 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L17D6RBQ6 530 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L19D6RCP7 530 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L20D6RJB6 530 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 AKR1B1P15121 316 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 ERVK-9P63128 1117 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 ERVK-24P63145 666 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 USP17L24Q0WX57 530 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 TMEM179Q6ZVK1 233 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 APPBP2Q92624 585 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 OSBP2Q969R2 916 aa22.12■■□□□ 1.13
PSPC1-202ENST00000427943 GJB1P08034 283 aa22.11■■□□□ 1.13
PSPC1-202ENST00000427943 CDK8P49336 464 aa22.11■■□□□ 1.13
PSPC1-202ENST00000427943 Q3C1V9 767 aa22.11■■□□□ 1.13
PSPC1-202ENST00000427943 CTR9Q6PD62 1173 aa22.11■■□□□ 1.13
PSPC1-202ENST00000427943 CATSPERGQ6ZRH7 1159 aa22.11■■□□□ 1.13
PSPC1-202ENST00000427943 PI4K2BQ8TCG2 481 aa22.11■■□□□ 1.13
PSPC1-202ENST00000427943 GTF3C2Q8WUA4 911 aaPredicted RBP22.11■■□□□ 1.13
PSPC1-202ENST00000427943 STRBPQ96SI9 672 aaKnown RBP22.11■■□□□ 1.13
PSPC1-202ENST00000427943 PORCNQ9H237 461 aa22.11■■□□□ 1.13
PSPC1-202ENST00000427943 RPAP3Q9H6T3 665 aaPredicted RBP22.11■■□□□ 1.13
PSPC1-202ENST00000427943 COL11A1P12107 1806 aaPredicted RBP22.1■■□□□ 1.13
PSPC1-202ENST00000427943 MYH4Q9Y623 1939 aa22.1■■□□□ 1.13
PSPC1-202ENST00000427943 RNF113AO15541 343 aaKnown RBP22.1■■□□□ 1.13
PSPC1-202ENST00000427943 GJA8P48165 433 aa22.1■■□□□ 1.13
PSPC1-202ENST00000427943 C16orf86Q6ZW13 317 aa22.1■■□□□ 1.13
PSPC1-202ENST00000427943 GJD2Q9UKL4 321 aa22.1■■□□□ 1.13
PSPC1-202ENST00000427943 M0R2C6 588 aa22.09■■□□□ 1.13
PSPC1-202ENST00000427943 ERC2O15083 957 aa22.09■■□□□ 1.13
PSPC1-202ENST00000427943 NKX2-3Q8TAU0 364 aa22.09■■□□□ 1.13
PSPC1-202ENST00000427943 ARPP21Q9UBL0 812 aaPredicted RBP22.09■■□□□ 1.13
PSPC1-202ENST00000427943 GSG1L2A8MUP6 293 aa22.08■■□□□ 1.13
PSPC1-202ENST00000427943 GPAA1O43292 621 aa22.08■■□□□ 1.13
PSPC1-202ENST00000427943 CNMDO75829 334 aa22.08■■□□□ 1.13
PSPC1-202ENST00000427943 GLRX3O76003 335 aaKnown RBP22.08■■□□□ 1.13
PSPC1-202ENST00000427943 ZFYP08048 801 aaPredicted RBP22.08■■□□□ 1.13
PSPC1-202ENST00000427943 MX1P20591 662 aa22.08■■□□□ 1.13
PSPC1-202ENST00000427943 MAPK4P31152 587 aa22.08■■□□□ 1.13
PSPC1-202ENST00000427943 ICA1Q05084 483 aa22.08■■□□□ 1.13
PSPC1-202ENST00000427943 CCAR1Q8IX12 1150 aaKnown RBP22.08■■□□□ 1.13
PSPC1-202ENST00000427943 STK11IPQ8N1F8 1099 aa22.08■■□□□ 1.13
PSPC1-202ENST00000427943 U2AF1L4Q8WU68 220 aaKnown RBP22.08■■□□□ 1.13
PSPC1-202ENST00000427943 SPDYE16A6NNV3 312 aaPredicted RBP22.07■■□□□ 1.12
PSPC1-202ENST00000427943 HMGCRP04035 888 aa22.07■■□□□ 1.12
PSPC1-202ENST00000427943 CYP2B6P20813 491 aa22.07■■□□□ 1.12
PSPC1-202ENST00000427943 TRIM32Q13049 653 aa22.07■■□□□ 1.12
PSPC1-202ENST00000427943 KIAA1755Q5JYT7 1200 aa22.07■■□□□ 1.12
PSPC1-202ENST00000427943 ANKRD45Q5TZF3 282 aa22.07■■□□□ 1.12
PSPC1-202ENST00000427943 CCDC17Q96LX7 622 aa22.07■■□□□ 1.12
PSPC1-202ENST00000427943 FSD1Q9BTV5 496 aa22.07■■□□□ 1.12
PSPC1-202ENST00000427943 ARHGEF10LQ9HCE6 1279 aa22.07■■□□□ 1.12
PSPC1-202ENST00000427943 EPB41L4AQ9HCS5 686 aaPredicted RBP22.07■■□□□ 1.12
PSPC1-202ENST00000427943 RABGAP1Q9Y3P9 1069 aa22.07■■□□□ 1.12
PSPC1-202ENST00000427943 SALL3Q9BXA9 1300 aa22.06■■□□□ 1.12
PSPC1-202ENST00000427943 FRMPD3Q5JV73 1810 aa22.06■■□□□ 1.12
PSPC1-202ENST00000427943 GPR142Q7Z601 462 aa22.06■■□□□ 1.12
PSPC1-202ENST00000427943 SIAH1Q8IUQ4 282 aa22.06■■□□□ 1.12
PSPC1-202ENST00000427943 SOCS4Q8WXH5 440 aa22.06■■□□□ 1.12
PSPC1-202ENST00000427943 TRIB2Q92519 343 aa22.06■■□□□ 1.12
PSPC1-202ENST00000427943 DEFB118Q96PH6 123 aa22.06■■□□□ 1.12
PSPC1-202ENST00000427943 NUDT12Q9BQG2 462 aa22.06■■□□□ 1.12
PSPC1-202ENST00000427943 TANGO6Q9C0B7 1094 aa22.06■■□□□ 1.12
PSPC1-202ENST00000427943 CWC22Q9HCG8 908 aaKnown RBP22.06■■□□□ 1.12
PSPC1-202ENST00000427943 BTBD7Q9P203 1132 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms